FFCP PHASE1:Mm9::chr5:90935541..90935550,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=246|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:90935541..90935550,+|id=chr5:90935541..90935550,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.84e-14!22;UBERON:0007499!9.84e-14!22;UBERON:0006925!9.84e-14!22;UBERON:0009497!9.84e-14!22;UBERON:0000015!9.84e-14!22;UBERON:0002423!9.84e-14!22;UBERON:0006235!9.84e-14!22;UBERON:0008835!9.84e-14!22;UBERON:0003894!9.84e-14!22;UBERON:0004161!9.84e-14!22;UBERON:0008836!9.84e-14!22;UBERON:0009854!5.22e-13!23;UBERON:0009856!5.22e-13!23;UBERON:0002365!9.79e-12!25;UBERON:0002330!9.79e-12!25;UBERON:0005631!7.28e-08!3;UBERON:0000478!7.28e-08!3;UBERON:0000158!7.28e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.10e-24,22;UBERON:0007499,3.10e-24,22;UBERON:0006925,3.10e-24,22;UBERON:0009497,3.10e-24,22;UBERON:0000015,3.10e-24,22;UBERON:0002423,3.10e-24,22;UBERON:0006235,3.10e-24,22;UBERON:0008835,3.10e-24,22;UBERON:0003894,3.10e-24,22;UBERON:0004161,3.10e-24,22;UBERON:0008836,3.10e-24,22;UBERON:0009854,3.45e-23,23;UBERON:0009856,3.45e-23,23;UBERON:0002365,2.40e-21,25;UBERON:0002330,2.40e-21,25;UBERON:0000305,1.55e-12,1;UBERON:0005256,6.97e-12,45;UBERON:0003914,2.24e-11,47;UBERON:0005172,6.54e-11,49;UBERON:0005173,6.54e-11,49;UBERON:0002417,6.54e-11,49;UBERON:0000916,6.54e-11,49;UBERON:0003929,1.03e-09,55;UBERON:0002368,6.72e-09,60;UBERON:0003104,9.44e-09,61;UBERON:0009142,9.44e-09,61;UBERON:0002530,3.31e-08,65;UBERON:0000490,4.43e-08,66;UBERON:0009569,4.43e-08,66;UBERON:0005911,1.01e-07,69;UBERON:0000949,2.14e-07,72|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,10.3821886448437,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.393117990226406,0.674586337154561,0.811440485554012,2.41177159752417,2.5462585178142,3.74004978686054,1.78348749452539,1.92192989231657,17.2521847832825,1.86070473834252,0.936113019343682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr5:90935541..90935550,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=246 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:90935541..90935550,+ | |||
|id=chr5:90935541..90935550,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.84e-14!22;UBERON:0007499!9.84e-14!22;UBERON:0006925!9.84e-14!22;UBERON:0009497!9.84e-14!22;UBERON:0000015!9.84e-14!22;UBERON:0002423!9.84e-14!22;UBERON:0006235!9.84e-14!22;UBERON:0008835!9.84e-14!22;UBERON:0003894!9.84e-14!22;UBERON:0004161!9.84e-14!22;UBERON:0008836!9.84e-14!22;UBERON:0009854!5.22e-13!23;UBERON:0009856!5.22e-13!23;UBERON:0002365!9.79e-12!25;UBERON:0002330!9.79e-12!25;UBERON:0005631!7.28e-08!3;UBERON:0000478!7.28e-08!3;UBERON:0000158!7.28e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.10e-24,22;UBERON:0007499,3.10e-24,22;UBERON:0006925,3.10e-24,22;UBERON:0009497,3.10e-24,22;UBERON:0000015,3.10e-24,22;UBERON:0002423,3.10e-24,22;UBERON:0006235,3.10e-24,22;UBERON:0008835,3.10e-24,22;UBERON:0003894,3.10e-24,22;UBERON:0004161,3.10e-24,22;UBERON:0008836,3.10e-24,22;UBERON:0009854,3.45e-23,23;UBERON:0009856,3.45e-23,23;UBERON:0002365,2.40e-21,25;UBERON:0002330,2.40e-21,25;UBERON:0000305,1.55e-12,1;UBERON:0005256,6.97e-12,45;UBERON:0003914,2.24e-11,47;UBERON:0005172,6.54e-11,49;UBERON:0005173,6.54e-11,49;UBERON:0002417,6.54e-11,49;UBERON:0000916,6.54e-11,49;UBERON:0003929,1.03e-09,55;UBERON:0002368,6.72e-09,60;UBERON:0003104,9.44e-09,61;UBERON:0009142,9.44e-09,61;UBERON:0002530,3.31e-08,65;UBERON:0000490,4.43e-08,66;UBERON:0009569,4.43e-08,66;UBERON:0005911,1.01e-07,69;UBERON:0000949,2.14e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,10.3821886448437,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.393117990226406,0.674586337154561,0.811440485554012,2.41177159752417,2.5462585178142,3.74004978686054,1.78348749452539,1.92192989231657,17.2521847832825,1.86070473834252,0.936113019343682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.847328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:90935541..90935550,+ | |||
}} |
Revision as of 08:17, 14 September 2013
Short description: | p@chr5:90935541..90935550, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:90935541..90935550, + |
Coexpression cluster: | MCL_coexpression_mm9:246 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 3.10e-24 | 22 |
epithelial sac | 3.10e-24 | 22 |
digestive gland | 3.10e-24 | 22 |
epithelium of foregut-midgut junction | 3.10e-24 | 22 |
anatomical boundary | 3.10e-24 | 22 |
hepatobiliary system | 3.10e-24 | 22 |
foregut-midgut junction | 3.10e-24 | 22 |
hepatic diverticulum | 3.10e-24 | 22 |
liver primordium | 3.10e-24 | 22 |
septum transversum | 3.10e-24 | 22 |
liver bud | 3.10e-24 | 22 |
digestive tract diverticulum | 3.45e-23 | 23 |
sac | 3.45e-23 | 23 |
exocrine gland | 2.40e-21 | 25 |
exocrine system | 2.40e-21 | 25 |
amnion | 1.55e-12 | 1 |
trunk mesenchyme | 6.97e-12 | 45 |
epithelial tube | 2.24e-11 | 47 |
abdomen element | 6.54e-11 | 49 |
abdominal segment element | 6.54e-11 | 49 |
abdominal segment of trunk | 6.54e-11 | 49 |
abdomen | 6.54e-11 | 49 |
gut epithelium | 1.03e-09 | 55 |
endocrine gland | 6.72e-09 | 60 |
mesenchyme | 9.44e-09 | 61 |
entire embryonic mesenchyme | 9.44e-09 | 61 |
gland | 3.31e-08 | 65 |
unilaminar epithelium | 4.43e-08 | 66 |
subdivision of trunk | 4.43e-08 | 66 |
endo-epithelium | 1.01e-07 | 69 |
endocrine system | 2.14e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.