FFCP PHASE1:Mm9::chr5:68238684..68238697,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11980|HGNC=|MCL_coexpression_id=1|UniProt=Q8BR88|association_with_transcript=-13bp_to_ENSMUST00000037380_5end|description=CAGE_peak_4_at_Atp8a1_5end|id=chr5:68238684..68238697,-|ontology_enrichment_celltype=CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-19,23;CL:0000337,1.07e-19,23;CL:0000540,3.07e-15,33;CL:0000047,3.07e-15,33;CL:0000031,3.07e-15,33;CL:0000404,3.07e-15,33;CL:0000393,1.13e-11,39;CL:0000211,1.13e-11,39;CL:0002319,6.97e-10,43;CL:0000221,1.72e-09,44;CL:0000133,1.72e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.43e-18!73;UBERON:0005743!2.43e-18!73;UBERON:0001049!3.14e-18!52;UBERON:0005068!3.14e-18!52;UBERON:0006241!3.14e-18!52;UBERON:0007135!3.14e-18!52;UBERON:0000033!6.07e-18!63;UBERON:0002346!1.05e-17!71;UBERON:0003075!1.05e-17!71;UBERON:0007284!1.05e-17!71;UBERON:0000073!2.05e-17!75;UBERON:0001016!2.05e-17!75;UBERON:0002020!5.44e-17!34;UBERON:0000955!6.51e-17!50;UBERON:0006238!6.51e-17!50;UBERON:0002616!2.24e-16!49;UBERON:0007811!4.72e-15!86;UBERON:0004121!7.93e-15!102;UBERON:0000924!7.93e-15!102;UBERON:0006601!7.93e-15!102;UBERON:0003056!9.08e-15!49;UBERON:0003080!1.02e-14!40;UBERON:0002791!2.85e-14!29;UBERON:0003528!2.85e-14!29;UBERON:0001893!2.85e-14!29;UBERON:0002780!3.60e-14!39;UBERON:0001890!3.60e-14!39;UBERON:0006240!3.60e-14!39;UBERON:0000153!4.29e-14!94;UBERON:0000956!8.99e-10!21;UBERON:0001869!8.99e-10!21;UBERON:0000203!8.99e-10!21;UBERON:0002021!7.41e-08!10;UBERON:0000411!7.41e-08!10;UBERON:0001950!7.41e-08!10;UBERON:0002619!8.01e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.85e-33,54;UBERON:0001017,6.78e-32,73;UBERON:0001049,3.82e-31,52;UBERON:0005068,3.82e-31,52;UBERON:0006241,3.82e-31,52;UBERON:0007135,3.82e-31,52;UBERON:0001016,1.39e-30,75;UBERON:0002346,4.17e-30,64;UBERON:0003075,4.17e-30,64;UBERON:0007284,4.17e-30,64;UBERON:0002020,2.62e-29,34;UBERON:0000955,3.96e-26,47;UBERON:0006238,3.96e-26,47;UBERON:0004121,1.38e-25,95;UBERON:0000924,1.38e-25,95;UBERON:0006601,1.38e-25,95;UBERON:0002616,3.45e-25,46;UBERON:0010371,1.94e-24,73;UBERON:0003528,2.04e-24,29;UBERON:0002791,2.04e-24,29;UBERON:0001893,2.04e-24,29;UBERON:0003080,5.70e-23,40;UBERON:0002780,5.24e-22,39;UBERON:0001890,5.24e-22,39;UBERON:0006240,5.24e-22,39;UBERON:0003056,3.36e-21,49;UBERON:0010314,4.81e-17,92;UBERON:0000956,2.45e-16,21;UBERON:0001869,2.45e-16,21;UBERON:0000203,2.45e-16,21;UBERON:0002619,7.52e-13,17;UBERON:0002021,7.70e-13,10;UBERON:0000411,7.70e-13,10;UBERON:0001950,7.70e-13,10;UBERON:0002420,2.86e-09,8;UBERON:0007245,2.86e-09,8;UBERON:0010009,2.86e-09,8;UBERON:0010011,2.86e-09,8;UBERON:0000454,2.86e-09,8;UBERON:0000025,1.51e-08,114;UBERON:0003076,1.78e-08,12;UBERON:0003057,1.78e-08,12;UBERON:0011216,2.49e-08,194;UBERON:0004111,9.06e-08,122;UBERON:0002240,5.02e-07,6;UBERON:0005174,5.02e-07,6;UBERON:0001137,5.02e-07,6;UBERON:0000119,7.84e-07,176|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0.33575854382378,0,0.645616617207881,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.874204024189974,0,0.404950534779652,0.699561878128147,0.630924330716475,1.37114433605739,1.27316895539409,1.10556277196391,0.496454756004426,0.783599367416806,0.159992422793407,0,0.57423196411502,0,0,0,0.756090389279792,0,0,1.23012957516914,0,0.288851619751275,0.332469290716985,0,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0.286533439938757,0,3.43937983461316,3.1739458756322,3.80298842103708,0.338844532069132,1.77858959222228,0,0,0.7104801149461,0,0.384218305321555,2.07379224616955,2.29510095163874,1.47227472945967,1.71390590642282,2.20868540951614,1.95985278743926,2.01275489138296,0.919218786610021,1.10115880999389,4.08599481872601,2.76491759861238,2.2420668914133,2.92760459527711,2.6045668527838,1.67509799400829,2.8138130501584,4.12555268997387,3.83017161115768,3.41692033917847,2.42319279572891,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,1.55362730188303,1.03909497345377,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,4.39171195517321,2.09446706813455,0.255457055208591,0,0,0.127070227073065,2.84602214869163,7.77751024791665,4.27224797183739,5.38855392596057,5.8814555185976,2.90903262383384,3.40706652442291,0.305518091550949,0.124406970610093,0.758168275301024,0.420883711772948,0.260240885925407,0.459804208866946,1.0803727788321,0.452114453507145,1.08858398642125,0.896796041993948,1.03071897015702,1.03481348295606,0,0,0.52785337249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| ||
|EntrezGene=11980 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BR88 | |||
|association_with_transcript=-13bp_to_ENSMUST00000037380_5end | |||
|description=CAGE_peak_4_at_Atp8a1_5end | |||
|id=chr5:68238684..68238697,- | |||
|ontology_enrichment_celltype=CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000540!1.44e-10!33;CL:0000047!1.44e-10!33;CL:0000031!1.44e-10!33;CL:0000404!1.44e-10!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-19,23;CL:0000337,1.07e-19,23;CL:0000540,3.07e-15,33;CL:0000047,3.07e-15,33;CL:0000031,3.07e-15,33;CL:0000404,3.07e-15,33;CL:0000393,1.13e-11,39;CL:0000211,1.13e-11,39;CL:0002319,6.97e-10,43;CL:0000221,1.72e-09,44;CL:0000133,1.72e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.43e-18!73;UBERON:0005743!2.43e-18!73;UBERON:0001049!3.14e-18!52;UBERON:0005068!3.14e-18!52;UBERON:0006241!3.14e-18!52;UBERON:0007135!3.14e-18!52;UBERON:0000033!6.07e-18!63;UBERON:0002346!1.05e-17!71;UBERON:0003075!1.05e-17!71;UBERON:0007284!1.05e-17!71;UBERON:0000073!2.05e-17!75;UBERON:0001016!2.05e-17!75;UBERON:0002020!5.44e-17!34;UBERON:0000955!6.51e-17!50;UBERON:0006238!6.51e-17!50;UBERON:0002616!2.24e-16!49;UBERON:0007811!4.72e-15!86;UBERON:0004121!7.93e-15!102;UBERON:0000924!7.93e-15!102;UBERON:0006601!7.93e-15!102;UBERON:0003056!9.08e-15!49;UBERON:0003080!1.02e-14!40;UBERON:0002791!2.85e-14!29;UBERON:0003528!2.85e-14!29;UBERON:0001893!2.85e-14!29;UBERON:0002780!3.60e-14!39;UBERON:0001890!3.60e-14!39;UBERON:0006240!3.60e-14!39;UBERON:0000153!4.29e-14!94;UBERON:0000956!8.99e-10!21;UBERON:0001869!8.99e-10!21;UBERON:0000203!8.99e-10!21;UBERON:0002021!7.41e-08!10;UBERON:0000411!7.41e-08!10;UBERON:0001950!7.41e-08!10;UBERON:0002619!8.01e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.85e-33,54;UBERON:0001017,6.78e-32,73;UBERON:0001049,3.82e-31,52;UBERON:0005068,3.82e-31,52;UBERON:0006241,3.82e-31,52;UBERON:0007135,3.82e-31,52;UBERON:0001016,1.39e-30,75;UBERON:0002346,4.17e-30,64;UBERON:0003075,4.17e-30,64;UBERON:0007284,4.17e-30,64;UBERON:0002020,2.62e-29,34;UBERON:0000955,3.96e-26,47;UBERON:0006238,3.96e-26,47;UBERON:0004121,1.38e-25,95;UBERON:0000924,1.38e-25,95;UBERON:0006601,1.38e-25,95;UBERON:0002616,3.45e-25,46;UBERON:0010371,1.94e-24,73;UBERON:0003528,2.04e-24,29;UBERON:0002791,2.04e-24,29;UBERON:0001893,2.04e-24,29;UBERON:0003080,5.70e-23,40;UBERON:0002780,5.24e-22,39;UBERON:0001890,5.24e-22,39;UBERON:0006240,5.24e-22,39;UBERON:0003056,3.36e-21,49;UBERON:0010314,4.81e-17,92;UBERON:0000956,2.45e-16,21;UBERON:0001869,2.45e-16,21;UBERON:0000203,2.45e-16,21;UBERON:0002619,7.52e-13,17;UBERON:0002021,7.70e-13,10;UBERON:0000411,7.70e-13,10;UBERON:0001950,7.70e-13,10;UBERON:0002420,2.86e-09,8;UBERON:0007245,2.86e-09,8;UBERON:0010009,2.86e-09,8;UBERON:0010011,2.86e-09,8;UBERON:0000454,2.86e-09,8;UBERON:0000025,1.51e-08,114;UBERON:0003076,1.78e-08,12;UBERON:0003057,1.78e-08,12;UBERON:0011216,2.49e-08,194;UBERON:0004111,9.06e-08,122;UBERON:0002240,5.02e-07,6;UBERON:0005174,5.02e-07,6;UBERON:0001137,5.02e-07,6;UBERON:0000119,7.84e-07,176 | |||
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| |||
|short_description=p4@Atp8a1 | |||
}} |
Revision as of 07:56, 14 September 2013
Short description: | p4@Atp8a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Atp8a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -13bp_to_ENSMUST00000037380_5end |
EntrezGene: | Atp8a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.07e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-19 | 23 |
neuron | 3.07e-15 | 33 |
neuronal stem cell | 3.07e-15 | 33 |
neuroblast | 3.07e-15 | 33 |
electrically signaling cell | 3.07e-15 | 33 |
electrically responsive cell | 1.13e-11 | 39 |
electrically active cell | 1.13e-11 | 39 |
neural cell | 6.97e-10 | 43 |
ectodermal cell | 1.72e-09 | 44 |
neurectodermal cell | 1.72e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.