FFCP PHASE1:Hg19::chr9:130913945..130913957,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C484|description=CAGE_peak_at_chr9:130913945..130913957,-|id=chr9:130913945..130913957,-|ontology_enrichment_celltype=CL:0000066!2.54e-14!254;CL:0002076!1.05e-13!43;CL:0000223!2.43e-10!59;CL:1000415!1.72e-07!2|ontology_enrichment_celltype_v019=CL:1001319;3.56e-19;1!CL:1000600;3.56e-19;1!CL:0002076;1.40e-07;42!CL:0002231;2.19e-07;3!CL:0000307;2.88e-07;3!CL:0002178;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:1001319,3.25e-19,1;CL:1000600,3.25e-19,1;CL:0002076,7.37e-11,42;CL:0000223,7.12e-08,58;CL:0002231,2.19e-07,3;CL:0002178,2.63e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3|ontology_enrichment_development_v019=UBERON:0008801;3.56e-19;1!CL:0000377;2.88e-07;3|ontology_enrichment_disease=DOID:1749!2.82e-17!14;DOID:305!1.11e-15!106;DOID:299!1.07e-13!25;DOID:0050687!6.75e-10!143;DOID:3493!1.46e-07!2;DOID:4929!2.38e-07!2|ontology_enrichment_disease_v019=DOID:3493;2.85e-10;2|ontology_enrichment_disease_v019_2=DOID:3493,2.49e-10,2;DOID:305,4.59e-08,106|ontology_enrichment_uberon=UBERON:0004119!1.61e-12!169;UBERON:0000925!1.61e-12!169;UBERON:0006595!1.61e-12!169;UBERON:0000077!2.05e-10!130;UBERON:0001007!2.63e-10!155;UBERON:0001555!2.63e-10!155;UBERON:0007026!2.63e-10!155;UBERON:0001723!3.32e-10!3;UBERON:0001033!3.32e-10!3;UBERON:0010056!3.32e-10!3;UBERON:0001004!4.81e-10!72;UBERON:0004921!1.73e-09!129;UBERON:0004185!1.73e-09!129;UBERON:0001041!1.91e-09!98;UBERON:0000161!4.46e-09!35;UBERON:0000466!9.10e-09!126;UBERON:0000166!1.15e-08!21;UBERON:0000065!1.26e-08!53;UBERON:0000464!1.90e-08!104;UBERON:0002294!5.42e-08!7;UBERON:0001173!5.42e-08!7;UBERON:0004912!5.42e-08!7;UBERON:0001829!5.73e-08!2;UBERON:0003127!7.77e-08!2;UBERON:0006562!2.53e-07!11|ontology_enrichment_uberon_v019=UBERON:0001831;3.56e-19;1!UBERON:0004645;3.56e-19;1!UBERON:0001256;3.56e-19;1!UBERON:0001567;3.56e-19;1!UBERON:0001259;3.56e-19;1!UBERON:0003126;3.48e-11;7!UBERON:0001005;3.48e-11;7!UBERON:0006562;1.57e-10;2!UBERON:0001255;2.85e-10;2!UBERON:0003127;2.85e-10;2!UBERON:0001829;2.85e-10;2!UBERON:0001556;2.85e-10;2!UBERON:0004089;2.85e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.25e-19,1;UBERON:0001256,3.25e-19,1;UBERON:0001259,3.25e-19,1;UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0003126,3.85e-11,7;UBERON:0001005,3.85e-11,7;UBERON:0001255,2.72e-10,2;UBERON:0001556,2.72e-10,2;UBERON:0003127,2.99e-10,2;UBERON:0001829,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0004921,3.32e-09,118;UBERON:0001007,2.13e-07,145;UBERON:0001555,2.13e-07,145;UBERON:0007026,2.13e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86740153530765,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0.173559738335131,0,0.261177619741208,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0.195551382734803,0.480952921509202,0,0.599428828746391,0,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0.739280431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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C484 | |||
|description=CAGE_peak_at_chr9:130913945..130913957,- | |||
|id=chr9:130913945..130913957,- | |||
|ontology_enrichment_celltype=CL:0000066!2.54e-14!254;CL:0002076!1.05e-13!43;CL:0000223!2.43e-10!59;CL:1000415!1.72e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1001319;3.56e-19;1!CL:1000600;3.56e-19;1!CL:0002076;1.40e-07;42!CL:0002231;2.19e-07;3!CL:0000307;2.88e-07;3!CL:0002178;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,3.25e-19,1;CL:1000600,3.25e-19,1;CL:0002076,7.37e-11,42;CL:0000223,7.12e-08,58;CL:0002231,2.19e-07,3;CL:0002178,2.63e-07,3;CL:0000068,3.16e-07,3;CL:0000069,3.16e-07,3;CL:0000307,3.16e-07,3;CL:0000377,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.56e-19;1!CL:0000377;2.88e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!2.82e-17!14;DOID:305!1.11e-15!106;DOID:299!1.07e-13!25;DOID:0050687!6.75e-10!143;DOID:3493!1.46e-07!2;DOID:4929!2.38e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.49e-10,2;DOID:305,4.59e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.61e-12!169;UBERON:0000925!1.61e-12!169;UBERON:0006595!1.61e-12!169;UBERON:0000077!2.05e-10!130;UBERON:0001007!2.63e-10!155;UBERON:0001555!2.63e-10!155;UBERON:0007026!2.63e-10!155;UBERON:0001723!3.32e-10!3;UBERON:0001033!3.32e-10!3;UBERON:0010056!3.32e-10!3;UBERON:0001004!4.81e-10!72;UBERON:0004921!1.73e-09!129;UBERON:0004185!1.73e-09!129;UBERON:0001041!1.91e-09!98;UBERON:0000161!4.46e-09!35;UBERON:0000466!9.10e-09!126;UBERON:0000166!1.15e-08!21;UBERON:0000065!1.26e-08!53;UBERON:0000464!1.90e-08!104;UBERON:0002294!5.42e-08!7;UBERON:0001173!5.42e-08!7;UBERON:0004912!5.42e-08!7;UBERON:0001829!5.73e-08!2;UBERON:0003127!7.77e-08!2;UBERON:0006562!2.53e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;3.56e-19;1!UBERON:0004645;3.56e-19;1!UBERON:0001256;3.56e-19;1!UBERON:0001567;3.56e-19;1!UBERON:0001259;3.56e-19;1!UBERON:0003126;3.48e-11;7!UBERON:0001005;3.48e-11;7!UBERON:0006562;1.57e-10;2!UBERON:0001255;2.85e-10;2!UBERON:0003127;2.85e-10;2!UBERON:0001829;2.85e-10;2!UBERON:0001556;2.85e-10;2!UBERON:0004089;2.85e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.25e-19,1;UBERON:0001256,3.25e-19,1;UBERON:0001259,3.25e-19,1;UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0003126,3.85e-11,7;UBERON:0001005,3.85e-11,7;UBERON:0001255,2.72e-10,2;UBERON:0001556,2.72e-10,2;UBERON:0003127,2.99e-10,2;UBERON:0001829,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0004921,3.32e-09,118;UBERON:0001007,2.13e-07,145;UBERON:0001555,2.13e-07,145;UBERON:0007026,2.13e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86740153530765,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0.173559738335131,0,0.261177619741208,0,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0.195551382734803,0.480952921509202,0,0.599428828746391,0,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0.739280431085226,0,0,0,0,0,1.09651553371436,0.992422356778588,0,7.66574565837572,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97838929107265,0,0,0.111855431797792,1.66855397145913,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,12.1416678251847,1.76447435857846,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0,0,0,0.435433495793923,0.342233301085281,0.404112318087525,1.36272190246085,0.332660356546013,1.46525883499754,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr9:130913945..130913957,- | |||
}} |
Revision as of 07:38, 14 September 2013
Short description: | p@chr9:130913945..130913957, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:130913945..130913957, - |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.25e-19 | 1 |
lower urinary tract cell | 3.25e-19 | 1 |
endo-epithelial cell | 7.37e-11 | 42 |
endodermal cell | 7.12e-08 | 58 |
epithelial cell of prostate | 2.19e-07 | 3 |
epithelial cell of stomach | 2.63e-07 | 3 |
duct epithelial cell | 3.16e-07 | 3 |
branched duct epithelial cell | 3.16e-07 | 3 |
tracheal epithelial cell | 3.16e-07 | 3 |
tracheoblast | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.25e-19 | 1 |
wall of urinary bladder | 3.25e-19 | 1 |
mucosa of urinary bladder | 3.25e-19 | 1 |
parotid gland | 5.62e-19 | 1 |
cheek | 5.62e-19 | 1 |
parotid gland primordium | 5.62e-19 | 1 |
trachea | 3.85e-11 | 7 |
respiratory airway | 3.85e-11 | 7 |
urinary bladder | 2.72e-10 | 2 |
lower urinary tract | 2.72e-10 | 2 |
open tracheal system trachea | 2.99e-10 | 2 |
major salivary gland | 3.58e-10 | 2 |
midface | 3.58e-10 | 2 |
subdivision of digestive tract | 3.32e-09 | 118 |
digestive system | 2.13e-07 | 145 |
digestive tract | 2.13e-07 | 145 |
primitive gut | 2.13e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.49e-10 | 2 |
carcinoma | 4.59e-08 | 106 |
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