FFCP PHASE1:Mm9::chr5:31916363..31916374,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66845|HGNC=|MCL_coexpression_id=3|UniProt=Q8R0E2|association_with_transcript=5bp_to_ENSMUST00000152261_5end|description=CAGE_peak_2_at_Mrpl33_5end|id=chr5:31916363..31916374,+|ontology_enrichment_celltype=CL:0000219!1.29e-11!54;CL:0002320!3.29e-08!46;CL:0000134!3.29e-08!46;CL:0000144!3.92e-08!121;CL:0000012!3.92e-08!121;CL:0002371!6.30e-08!118;CL:0000988!1.12e-07!32;CL:0002032!1.12e-07!32;CL:0000037!1.12e-07!32;CL:0000566!1.12e-07!32;CL:0000837!1.12e-07!32;CL:0000063!7.46e-07!66;CL:0000355!9.32e-07!9;CL:0000548!9.65e-07!115;CL:0000004!9.65e-07!115;CL:0000255!9.65e-07!115|ontology_enrichment_celltype_v019_2=CL:0000219,1.20e-11,54;CL:0002320,3.10e-08,46;CL:0000134,3.10e-08,46;CL:0000988,1.05e-07,32;CL:0002032,1.05e-07,32;CL:0000037,1.05e-07,32;CL:0000837,1.05e-07,32;CL:0000355,9.31e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!5.01e-10!32;UBERON:0003081!1.33e-08!88;UBERON:0002384!3.29e-08!46;UBERON:0000926!9.01e-08!193;UBERON:0004120!9.01e-08!193;UBERON:0006603!9.01e-08!193;UBERON:0002193!7.58e-07!48;UBERON:0001134!9.32e-07!9;UBERON:0002036!9.32e-07!9;UBERON:0002385!9.32e-07!9;UBERON:0000486!9.32e-07!9;UBERON:0001015!9.32e-07!9;UBERON:0004290!9.32e-07!9;UBERON:0003082!9.32e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.09e-11,120;UBERON:0004120,1.09e-11,120;UBERON:0006603,1.09e-11,120;UBERON:0002204,5.00e-10,32;UBERON:0003081,2.90e-08,87;UBERON:0002384,3.10e-08,46;UBERON:0002193,7.58e-07,48;UBERON:0002405,7.58e-07,48;UBERON:0001134,9.31e-07,9;UBERON:0002036,9.31e-07,9;UBERON:0002385,9.31e-07,9;UBERON:0000486,9.31e-07,9;UBERON:0007503,9.31e-07,9;UBERON:0001015,9.31e-07,9;UBERON:0002329,9.31e-07,9;UBERON:0003082,9.31e-07,9;UBERON:0003059,9.31e-07,9;UBERON:0007282,9.31e-07,9;UBERON:0004290,9.31e-07,9;UBERON:0009618,9.31e-07,9|phase1_expression=2.88267924788629,1.04692622291808,3.63999391511629,3.32710632437513,0.500895729946347,1.51091344720701,2.56973904655078,2.7115897922731,9.99599927276834,18.7251621057595,10.1018601253048,6.30200056063158,5.82082481766099,4.63328132820686,4.33042690360362,5.26435695213547,5.59649502502517,9.30613387806801,6.30726394586398,7.21462408056651,2.12608225377674,3.07801948722744,7.57479388502913,4.7997726838022,5.04700418347774,2.29692785646008,0.86152399231815,1.939241094173,2.47030445293286,2.26827116783938,2.66076612786366,4.44521471421742,1.84519436275371,0,4.33277429626912,2.32728503501889,2.6542016314108,54.8276436265349,60.9441568728564,36.1231383341921,116.469834630141,89.4789585295564,63.11634589405,8.68688044031483,8.71841608487825,19.0888622248149,7.04152209913235,12.209408757305,7.46933021297204,9.91592485278845,4.61955191363696,8.62515386189829,5.20126078778983,2.90144856804538,4.03312558970957,7.97504251711436,9.74213695791773,10.8291139378263,1.61853168687678,2.11596391708813,1.90149421051854,4.06613438482959,3.55717918444456,3.1496490104849,3.9554654502679,4.9733608046227,8.98800331555214,6.91592949578798,1.97010263386108,2.16009501330705,2.52389953621658,2.85650984403804,4.41737081903227,1.95985278743926,2.1086003624012,0.919218786610021,1.10115880999389,2.68143409978894,1.53606533256243,1.97829431595291,2.37867873366265,1.04182674111352,1.67509799400829,3.37657566019008,1.98637722109853,1.17851434189467,3.41692033917847,1.1183966749518,7.72407171998477,7.17929821014462,5.79728977403356,2.58127163094416,6.11974200336975,1.61910957491345,5.19821133958135,1.34408066129201,2.38755514223978,2.72688516124892,7.01422212427746,8.83348936275851,2.11265129665021,21.815501160434,15.2883143823987,7.11066703153331,9.95858788651585,14.1881524666055,13.6491600153991,1.82694207550496,6.99132285847364,5.78924342352817,3.81667718885499,5.78484408793068,5.30415643688935,7.68685466818375,4.46837087115678,5.27799683584637,2.47194967734374,3.7595832799177,9.73071607144862,3.72063754879041,3.97514733228708,3.87900202508178,5.59175283654366,1.46390398505774,0.628340120440365,0.766371165625774,7.42853771936706,23.3962065087429,9.65733725755292,1.79748767285787,1.37250180845588,1.00523481690292,1.39059456153821,1.27857728665165,2.90903262383384,1.46017136760982,2.74966282395854,5.10068579501381,5.81262344397452,0.841767423545896,2.60240885925407,4.59804208866946,2.52086981727489,3.61691562805716,1.90502197623718,3.07472928683639,1.87403449119458,2.06962696591213,1.72454394346274,2.45837904218165,2.46331573829528,3.28793598641362,3.89266148915837,3.48252166522167,2.88094990971121,4.17971960318836,22.4708219940235,20.8451804762919,12.5031939734061,3.31401236056803,2.34526059981096,3.78130329068131,2.60419209143731,3.54175617145327,1.85120535464854,2.32533944750408,5.09719462659276,2.45207218971056,3.29119699826961,4.43252153013557,2.51313309592153,3.36259971078264,4.83010253640311,1.8788898626452,0.630869845692382,1.74937841044784,0.991256348951394,2.64450566663544,2.55945900642281,3.0190767341857,3.60828891701861,1.4117846723634,1.33426826306922,0.380451252225118,1.42358718463353,1.4822905925161,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| ||
|EntrezGene=66845 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q8R0E2 | |||
|association_with_transcript=5bp_to_ENSMUST00000152261_5end | |||
|description=CAGE_peak_2_at_Mrpl33_5end | |||
|id=chr5:31916363..31916374,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.29e-11!54;CL:0002320!3.29e-08!46;CL:0000134!3.29e-08!46;CL:0000144!3.92e-08!121;CL:0000012!3.92e-08!121;CL:0002371!6.30e-08!118;CL:0000988!1.12e-07!32;CL:0002032!1.12e-07!32;CL:0000037!1.12e-07!32;CL:0000566!1.12e-07!32;CL:0000837!1.12e-07!32;CL:0000063!7.46e-07!66;CL:0000355!9.32e-07!9;CL:0000548!9.65e-07!115;CL:0000004!9.65e-07!115;CL:0000255!9.65e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.20e-11,54;CL:0002320,3.10e-08,46;CL:0000134,3.10e-08,46;CL:0000988,1.05e-07,32;CL:0002032,1.05e-07,32;CL:0000037,1.05e-07,32;CL:0000837,1.05e-07,32;CL:0000355,9.31e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.01e-10!32;UBERON:0003081!1.33e-08!88;UBERON:0002384!3.29e-08!46;UBERON:0000926!9.01e-08!193;UBERON:0004120!9.01e-08!193;UBERON:0006603!9.01e-08!193;UBERON:0002193!7.58e-07!48;UBERON:0001134!9.32e-07!9;UBERON:0002036!9.32e-07!9;UBERON:0002385!9.32e-07!9;UBERON:0000486!9.32e-07!9;UBERON:0001015!9.32e-07!9;UBERON:0004290!9.32e-07!9;UBERON:0003082!9.32e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.09e-11,120;UBERON:0004120,1.09e-11,120;UBERON:0006603,1.09e-11,120;UBERON:0002204,5.00e-10,32;UBERON:0003081,2.90e-08,87;UBERON:0002384,3.10e-08,46;UBERON:0002193,7.58e-07,48;UBERON:0002405,7.58e-07,48;UBERON:0001134,9.31e-07,9;UBERON:0002036,9.31e-07,9;UBERON:0002385,9.31e-07,9;UBERON:0000486,9.31e-07,9;UBERON:0007503,9.31e-07,9;UBERON:0001015,9.31e-07,9;UBERON:0002329,9.31e-07,9;UBERON:0003082,9.31e-07,9;UBERON:0003059,9.31e-07,9;UBERON:0007282,9.31e-07,9;UBERON:0004290,9.31e-07,9;UBERON:0009618,9.31e-07,9 | |||
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| |||
|short_description=p2@Mrpl33 | |||
}} |
Revision as of 07:26, 14 September 2013
Short description: | p2@Mrpl33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mrpl33_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 5bp_to_ENSMUST00000152261_5end |
EntrezGene: | Mrpl33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.20e-11 | 54 |
connective tissue cell | 3.10e-08 | 46 |
mesenchymal cell | 3.10e-08 | 46 |
hematopoietic cell | 1.05e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.05e-07 | 32 |
hematopoietic stem cell | 1.05e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.05e-07 | 32 |
multi-potent skeletal muscle stem cell | 9.31e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.09e-11 | 120 |
mesoderm-derived structure | 1.09e-11 | 120 |
presumptive mesoderm | 1.09e-11 | 120 |
musculoskeletal system | 5.00e-10 | 32 |
lateral plate mesoderm | 2.90e-08 | 87 |
connective tissue | 3.10e-08 | 46 |
hemolymphoid system | 7.58e-07 | 48 |
immune system | 7.58e-07 | 48 |
skeletal muscle tissue | 9.31e-07 | 9 |
striated muscle tissue | 9.31e-07 | 9 |
muscle tissue | 9.31e-07 | 9 |
multilaminar epithelium | 9.31e-07 | 9 |
epithelial vesicle | 9.31e-07 | 9 |
musculature | 9.31e-07 | 9 |
somite | 9.31e-07 | 9 |
myotome | 9.31e-07 | 9 |
presomitic mesoderm | 9.31e-07 | 9 |
presumptive segmental plate | 9.31e-07 | 9 |
dermomyotome | 9.31e-07 | 9 |
trunk paraxial mesoderm | 9.31e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.