FFCP PHASE1:Mm9::chr5:30441185..30441192,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=207|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:30441185..30441192,-|id=chr5:30441185..30441192,-|ontology_enrichment_celltype=CL:0000239!1.98e-08!6;CL:0000677!1.98e-08!6;CL:0000212!1.98e-08!6;CL:0000584!1.98e-08!6;CL:0000075!4.35e-07!7|ontology_enrichment_celltype_v019_2=CL:0000182,2.16e-10,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.23e-17!22;UBERON:0007499!1.23e-17!22;UBERON:0006925!1.23e-17!22;UBERON:0009497!1.23e-17!22;UBERON:0000015!1.23e-17!22;UBERON:0002423!1.23e-17!22;UBERON:0006235!1.23e-17!22;UBERON:0008835!1.23e-17!22;UBERON:0003894!1.23e-17!22;UBERON:0004161!1.23e-17!22;UBERON:0008836!1.23e-17!22;UBERON:0009854!1.22e-16!23;UBERON:0009856!1.22e-16!23;UBERON:0002365!6.94e-15!25;UBERON:0002330!6.94e-15!25;UBERON:0000160!7.32e-11!43;UBERON:0004119!8.15e-11!130;UBERON:0000925!8.15e-11!130;UBERON:0006595!8.15e-11!130;UBERON:0001007!1.95e-10!128;UBERON:0001555!1.95e-10!128;UBERON:0007026!1.95e-10!128;UBERON:0000344!3.80e-10!15;UBERON:0003929!3.74e-09!55;UBERON:0004921!5.12e-09!126;UBERON:0004185!5.12e-09!126;UBERON:0004923!9.43e-08!24;UBERON:0001242!1.35e-07!13;UBERON:0000060!1.35e-07!13;UBERON:0001262!1.35e-07!13;UBERON:0004786!1.35e-07!13;UBERON:0005409!4.88e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.77e-12,2;UBERON:0001961,1.77e-12,2;UBERON:0001744,1.77e-12,2;UBERON:0002107,1.14e-11,22;UBERON:0007499,1.14e-11,22;UBERON:0006925,1.14e-11,22;UBERON:0009497,1.14e-11,22;UBERON:0000015,1.14e-11,22;UBERON:0002423,1.14e-11,22;UBERON:0006235,1.14e-11,22;UBERON:0008835,1.14e-11,22;UBERON:0003894,1.14e-11,22;UBERON:0004161,1.14e-11,22;UBERON:0008836,1.14e-11,22;UBERON:0009854,3.91e-11,23;UBERON:0009856,3.91e-11,23;UBERON:0002365,3.42e-10,25;UBERON:0002330,3.42e-10,25;UBERON:0002465,1.31e-08,3;UBERON:0000305,3.59e-07,1;UBERON:0003199,4.10e-07,1|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,2.52350209173887,1.14846392823004,0.86152399231815,0.215471232685889,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,1.29955283489534,1.34408066129201,4.21333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,3.46072954828123,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,1.32167513193519,1.32225283331772,0,0,0,0.201683524623343,0.444756087689741,0.760902504450237,0.949058123089023,3.95277491337626,0.251335208800269,0.795825888164603,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,1.37280706594041,1.43768206527355,1.86070473834252,0.624075346229121,1.26289438973556,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0.952587382566147,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr5:30441185..30441192,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=207 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:30441185..30441192,- | |||
|id=chr5:30441185..30441192,- | |||
|ontology_enrichment_celltype=CL:0000239!1.98e-08!6;CL:0000677!1.98e-08!6;CL:0000212!1.98e-08!6;CL:0000584!1.98e-08!6;CL:0000075!4.35e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.16e-10,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.23e-17!22;UBERON:0007499!1.23e-17!22;UBERON:0006925!1.23e-17!22;UBERON:0009497!1.23e-17!22;UBERON:0000015!1.23e-17!22;UBERON:0002423!1.23e-17!22;UBERON:0006235!1.23e-17!22;UBERON:0008835!1.23e-17!22;UBERON:0003894!1.23e-17!22;UBERON:0004161!1.23e-17!22;UBERON:0008836!1.23e-17!22;UBERON:0009854!1.22e-16!23;UBERON:0009856!1.22e-16!23;UBERON:0002365!6.94e-15!25;UBERON:0002330!6.94e-15!25;UBERON:0000160!7.32e-11!43;UBERON:0004119!8.15e-11!130;UBERON:0000925!8.15e-11!130;UBERON:0006595!8.15e-11!130;UBERON:0001007!1.95e-10!128;UBERON:0001555!1.95e-10!128;UBERON:0007026!1.95e-10!128;UBERON:0000344!3.80e-10!15;UBERON:0003929!3.74e-09!55;UBERON:0004921!5.12e-09!126;UBERON:0004185!5.12e-09!126;UBERON:0004923!9.43e-08!24;UBERON:0001242!1.35e-07!13;UBERON:0000060!1.35e-07!13;UBERON:0001262!1.35e-07!13;UBERON:0004786!1.35e-07!13;UBERON:0005409!4.88e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.77e-12,2;UBERON:0001961,1.77e-12,2;UBERON:0001744,1.77e-12,2;UBERON:0002107,1.14e-11,22;UBERON:0007499,1.14e-11,22;UBERON:0006925,1.14e-11,22;UBERON:0009497,1.14e-11,22;UBERON:0000015,1.14e-11,22;UBERON:0002423,1.14e-11,22;UBERON:0006235,1.14e-11,22;UBERON:0008835,1.14e-11,22;UBERON:0003894,1.14e-11,22;UBERON:0004161,1.14e-11,22;UBERON:0008836,1.14e-11,22;UBERON:0009854,3.91e-11,23;UBERON:0009856,3.91e-11,23;UBERON:0002365,3.42e-10,25;UBERON:0002330,3.42e-10,25;UBERON:0002465,1.31e-08,3;UBERON:0000305,3.59e-07,1;UBERON:0003199,4.10e-07,1 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,2.52350209173887,1.14846392823004,0.86152399231815,0.215471232685889,0.570070258369122,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3599426674155,0,1.29955283489534,1.34408066129201,4.21333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,3.46072954828123,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,1.32167513193519,1.32225283331772,0,0,0,0.201683524623343,0.444756087689741,0.760902504450237,0.949058123089023,3.95277491337626,0.251335208800269,0.795825888164603,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,1.37280706594041,1.43768206527355,1.86070473834252,0.624075346229121,1.26289438973556,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0.952587382566147,0,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:30441185..30441192,- | |||
}} |
Revision as of 07:22, 14 September 2013
Short description: | p@chr5:30441185..30441192, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:30441185..30441192, - |
Coexpression cluster: | MCL_coexpression_mm9:207 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.16e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.77e-12 | 2 |
mucosa-associated lymphoid tissue | 1.77e-12 | 2 |
lymphoid tissue | 1.77e-12 | 2 |
liver | 1.14e-11 | 22 |
epithelial sac | 1.14e-11 | 22 |
digestive gland | 1.14e-11 | 22 |
epithelium of foregut-midgut junction | 1.14e-11 | 22 |
anatomical boundary | 1.14e-11 | 22 |
hepatobiliary system | 1.14e-11 | 22 |
foregut-midgut junction | 1.14e-11 | 22 |
hepatic diverticulum | 1.14e-11 | 22 |
liver primordium | 1.14e-11 | 22 |
septum transversum | 1.14e-11 | 22 |
liver bud | 1.14e-11 | 22 |
digestive tract diverticulum | 3.91e-11 | 23 |
sac | 3.91e-11 | 23 |
exocrine gland | 3.42e-10 | 25 |
exocrine system | 3.42e-10 | 25 |
lymphoid system | 1.31e-08 | 3 |
amnion | 3.59e-07 | 1 |
egg chamber | 4.10e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.