FFCP PHASE1:Hg19::chr9:113800377..113800400,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3166|TSSclassifier=S|UniProt=Q92633,Q5VZX0|association_with_transcript=-12bp_to_ENST00000358883,NM_001401,NM_057159,uc004bfb.2,uc004bfc.2,uc011lwn.1_5end|coexpression_cluster_id=C2016|description=CAGE_peak_6_at_LPAR1_5end|id=chr9:113800377..113800400,-|ontology_enrichment_celltype=CL:0000055!1.98e-18!180;CL:0000057!1.11e-13!75;CL:0000680!1.90e-08!57;CL:0000056!1.90e-08!57;CL:0000355!1.90e-08!57;CL:0000187!2.19e-07!54;CL:0000183!4.83e-07!59|ontology_enrichment_celltype_v019=CL:0000057;3.92e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,1.30e-14,76;CL:0000680,1.75e-10,58;CL:0000056,1.75e-10,58;CL:0000355,1.75e-10,58;CL:0000187,4.75e-09,55;CL:0000393,1.21e-07,61;CL:0000211,1.21e-07,61;CL:0000192,1.39e-07,43;CL:0000514,1.39e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.14e-17!365;UBERON:0000914!6.03e-13!83;UBERON:0002329!6.03e-13!83;UBERON:0003077!6.03e-13!83;UBERON:0003059!6.03e-13!83;UBERON:0007282!6.03e-13!83;UBERON:0009618!6.03e-13!83;UBERON:0007285!6.03e-13!83;UBERON:0000468!1.76e-11!659;UBERON:0000481!1.22e-10!347;UBERON:0000486!6.94e-10!82;UBERON:0005256!1.14e-09!143;UBERON:0004290!1.15e-09!70;UBERON:0002100!6.35e-09!216;UBERON:0000467!7.53e-09!625;UBERON:0002050!1.02e-08!605;UBERON:0005423!1.02e-08!605;UBERON:0000923!1.02e-08!604;UBERON:0005291!1.02e-08!604;UBERON:0006598!1.02e-08!604;UBERON:0002532!1.02e-08!604;UBERON:0000480!1.18e-08!626;UBERON:0000922!1.18e-08!612;UBERON:0000033!4.01e-08!123;UBERON:0003102!4.05e-08!95;UBERON:0000119!1.02e-07!312;UBERON:0000479!1.22e-07!787;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0000153!1.71e-07!129;UBERON:0007811!1.71e-07!129;UBERON:0001134!1.84e-07!61;UBERON:0002036!1.84e-07!61;UBERON:0003082!1.84e-07!61;UBERON:0000062!2.82e-07!511;UBERON:0000483!4.22e-07!309;UBERON:0002385!4.36e-07!63;UBERON:0001015!4.36e-07!63;UBERON:0000383!4.36e-07!63;UBERON:0001017!4.41e-07!82;UBERON:0000073!8.46e-07!94;UBERON:0001016!8.46e-07!94|ontology_enrichment_uberon_v019=UBERON:0000075;1.84e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.64e-12,73;UBERON:0002329,2.73e-12,71;UBERON:0003059,2.73e-12,71;UBERON:0007282,2.73e-12,71;UBERON:0004290,2.73e-12,71;UBERON:0009618,2.73e-12,71;UBERON:0003077,6.52e-12,72;UBERON:0007285,6.52e-12,72;UBERON:0007503,3.88e-11,78;UBERON:0000486,3.93e-11,83;UBERON:0005256,2.15e-10,122;UBERON:0003104,1.19e-09,160;UBERON:0009142,1.19e-09,160;UBERON:0000119,1.57e-09,309;UBERON:0000955,3.53e-09,68;UBERON:0006238,3.53e-09,68;UBERON:0001134,4.83e-09,62;UBERON:0002036,4.83e-09,62;UBERON:0003082,4.83e-09,62;UBERON:0000483,1.06e-08,306;UBERON:0001017,1.12e-08,81;UBERON:0002385,2.10e-08,64;UBERON:0001015,2.10e-08,64;UBERON:0000383,2.10e-08,64;UBERON:0010314,3.73e-08,132;UBERON:0001016,4.08e-08,89;UBERON:0003102,1.07e-07,99;UBERON:0000075,1.08e-07,16;UBERON:0001049,1.08e-07,56;UBERON:0005068,1.08e-07,56;UBERON:0006241,1.08e-07,56;UBERON:0007135,1.08e-07,56;UBERON:0011216,2.14e-07,223;UBERON:0004121,2.42e-07,171;UBERON:0000924,2.42e-07,171;UBERON:0006601,2.42e-07,171|phase1_expression=2.72517568905835,1.71280419112787,4.22863212287913,3.00219895059391,4.02264984984559,0,0,0,1.82829939739887,0.982935746006035,0,0.218441372130172,0,4.45558870656168,5.63375538737457,3.36162573225888,0.602694528023977,2.92124036154949,1.95173119516203,0.369363174230364,2.04000691244253,0.313454721478088,0,0,0.251085279189606,0.764134057479513,1.31360943119913,1.18066171970519,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,1.79132379391939,2.91504299417082,1.54545340580512,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,1.31940520074686,0.797854630486527,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0.65156653411535,0,1.10483290796269,0.632924774881769,0.211255286311942,0.425208599930087,0.838634582033504,1.57260083605093,1.05123824989054,1.6072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,1.50401373190767,2.75208386025565,2.3858578411533,1.94653948121054,0.0945348171640679,0.221729397462564,0,0.916853528483988,0.364295288292542,0,0.649094787309367,0.522389211897802,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0.872188104285069,0.993943903390637,1.01304409331664,0.529636723252875,2.86836620748814,1.77334191099179,0.560677600142307,0,0,1.8672662123986,0.404132016209064,0,1.36221684880438,4.03323147135999,3.98346434117454,2.80944069147288,0,3.28787097213962,2.8184279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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |||
|TSSclassifier=S | |||
|UniProt=Q92633,Q5VZX0 | |||
|association_with_transcript=-12bp_to_ENST00000358883,NM_001401,NM_057159,uc004bfb.2,uc004bfc.2,uc011lwn.1_5end | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_6_at_LPAR1_5end | |||
|id=chr9:113800377..113800400,- | |||
|ontology_enrichment_celltype=CL:0000055!1.98e-18!180;CL:0000057!1.11e-13!75;CL:0000680!1.90e-08!57;CL:0000056!1.90e-08!57;CL:0000355!1.90e-08!57;CL:0000187!2.19e-07!54;CL:0000183!4.83e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000057;3.92e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.30e-14,76;CL:0000680,1.75e-10,58;CL:0000056,1.75e-10,58;CL:0000355,1.75e-10,58;CL:0000187,4.75e-09,55;CL:0000393,1.21e-07,61;CL:0000211,1.21e-07,61;CL:0000192,1.39e-07,43;CL:0000514,1.39e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.14e-17!365;UBERON:0000914!6.03e-13!83;UBERON:0002329!6.03e-13!83;UBERON:0003077!6.03e-13!83;UBERON:0003059!6.03e-13!83;UBERON:0007282!6.03e-13!83;UBERON:0009618!6.03e-13!83;UBERON:0007285!6.03e-13!83;UBERON:0000468!1.76e-11!659;UBERON:0000481!1.22e-10!347;UBERON:0000486!6.94e-10!82;UBERON:0005256!1.14e-09!143;UBERON:0004290!1.15e-09!70;UBERON:0002100!6.35e-09!216;UBERON:0000467!7.53e-09!625;UBERON:0002050!1.02e-08!605;UBERON:0005423!1.02e-08!605;UBERON:0000923!1.02e-08!604;UBERON:0005291!1.02e-08!604;UBERON:0006598!1.02e-08!604;UBERON:0002532!1.02e-08!604;UBERON:0000480!1.18e-08!626;UBERON:0000922!1.18e-08!612;UBERON:0000033!4.01e-08!123;UBERON:0003102!4.05e-08!95;UBERON:0000119!1.02e-07!312;UBERON:0000479!1.22e-07!787;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0000153!1.71e-07!129;UBERON:0007811!1.71e-07!129;UBERON:0001134!1.84e-07!61;UBERON:0002036!1.84e-07!61;UBERON:0003082!1.84e-07!61;UBERON:0000062!2.82e-07!511;UBERON:0000483!4.22e-07!309;UBERON:0002385!4.36e-07!63;UBERON:0001015!4.36e-07!63;UBERON:0000383!4.36e-07!63;UBERON:0001017!4.41e-07!82;UBERON:0000073!8.46e-07!94;UBERON:0001016!8.46e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;1.84e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.64e-12,73;UBERON:0002329,2.73e-12,71;UBERON:0003059,2.73e-12,71;UBERON:0007282,2.73e-12,71;UBERON:0004290,2.73e-12,71;UBERON:0009618,2.73e-12,71;UBERON:0003077,6.52e-12,72;UBERON:0007285,6.52e-12,72;UBERON:0007503,3.88e-11,78;UBERON:0000486,3.93e-11,83;UBERON:0005256,2.15e-10,122;UBERON:0003104,1.19e-09,160;UBERON:0009142,1.19e-09,160;UBERON:0000119,1.57e-09,309;UBERON:0000955,3.53e-09,68;UBERON:0006238,3.53e-09,68;UBERON:0001134,4.83e-09,62;UBERON:0002036,4.83e-09,62;UBERON:0003082,4.83e-09,62;UBERON:0000483,1.06e-08,306;UBERON:0001017,1.12e-08,81;UBERON:0002385,2.10e-08,64;UBERON:0001015,2.10e-08,64;UBERON:0000383,2.10e-08,64;UBERON:0010314,3.73e-08,132;UBERON:0001016,4.08e-08,89;UBERON:0003102,1.07e-07,99;UBERON:0000075,1.08e-07,16;UBERON:0001049,1.08e-07,56;UBERON:0005068,1.08e-07,56;UBERON:0006241,1.08e-07,56;UBERON:0007135,1.08e-07,56;UBERON:0011216,2.14e-07,223;UBERON:0004121,2.42e-07,171;UBERON:0000924,2.42e-07,171;UBERON:0006601,2.42e-07,171 | |||
|phase1_expression=2.72517568905835,1.71280419112787,4.22863212287913,3.00219895059391,4.02264984984559,0,0,0,1.82829939739887,0.982935746006035,0,0.218441372130172,0,4.45558870656168,5.63375538737457,3.36162573225888,0.602694528023977,2.92124036154949,1.95173119516203,0.369363174230364,2.04000691244253,0.313454721478088,0,0,0.251085279189606,0.764134057479513,1.31360943119913,1.18066171970519,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,1.79132379391939,2.91504299417082,1.54545340580512,0.581592955118259,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,1.31940520074686,0.797854630486527,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0,0.65156653411535,0,1.10483290796269,0.632924774881769,0.211255286311942,0.425208599930087,0.838634582033504,1.57260083605093,1.05123824989054,1.6072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,1.50401373190767,2.75208386025565,2.3858578411533,1.94653948121054,0.0945348171640679,0.221729397462564,0,0.916853528483988,0.364295288292542,0,0.649094787309367,0.522389211897802,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0.872188104285069,0.993943903390637,1.01304409331664,0.529636723252875,2.86836620748814,1.77334191099179,0.560677600142307,0,0,1.8672662123986,0.404132016209064,0,1.36221684880438,4.03323147135999,3.98346434117454,2.80944069147288,0,3.28787097213962,2.81842796745036,3.39933183173076,2.24721290723598,4.28723759635276,3.68502951935304,4.95963749643674,9.50402285825643,4.94533858557114,5.46096817162816,6.46756327634615,3.87173062094352,4.62938523526267,3.87889761677856,2.19488810440419,1.83892677479412,5.40857012063748,0.453728732640084,0.538168907066586,0.640672166455702,1.05965950579781,0.600182192168805,1.13357782162283,1.8034837803194,1.8611685633159,1.35021065793013,0.974370051611986,0.252433774244115,1.47279837827679,1.77810662500693,1.42003837006646,1.30977727695932,3.22165125389926,0.386521706326594,0.545492241181669,1.14721838155602,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.72995471815166,1.56449532329816,2.57296375277154,1.38134921352481,3.25057549622385,2.16563844500876,0,0,0,0,0.217879444092406,0,0,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.201057944823262,0.277765335475589,4.88712457965487,3.11980435583874,0,0,0.587043471179108,0.144366447761074,0,0,0,0.858486162094873,0.738651018262192,0.234004265139238,2.37809859661965,0.93733833986777,0,0.283550194484773,0,0.581267877027924,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,2.46688385559794,1.74384027533312,2.7868548611961,0.775630294546667,0,1.690605505112,0.531876233169741,3.12022310734098,2.05765899409714,1.41849132023278,2.39779961114489,3.0025378668211,3.7983512377401,3.29296134712308,0.977208552881205,2.84313558994037,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,0,0.239624855491583,0,1.42636905040718,3.04040744001916,3.6985738059069,1.61154866915906,0,0.197030760201927,0,0,0.76228387266739,0,0,0,0,0.749007023947182,0,0.414415513436035,7.48418099486753,5.50187573165645,4.06897535549603,0.415941723061614,1.96271887676878,1.89242898040722,0.819989904948992,1.80567659836631,4.5481500811197,2.0694614258501,1.32845119707087,2.02806085395873,3.5622281931914,1.37060810223918,1.02943027143257,0,0,0.106727557803444,0.303127571446259,0,0.907170879989041,1.73675465473144,1.2276957863045,1.40330047216537,3.71603532841533,0.511707249066704,0.321707842287215,1.48418066444991,1.54209693802656,0.710246901252508,3.03870477251094,1.55776328755086,1.51073491997947,1.20859449591622,0.601519410909855,0.0920809889358963,2.52591785962135,2.91345868810747,4.72047893853927,0,0.539107359730903,0,1.46139224653261,0.316654886678627,0,0,0.647747748306418,1.54227252690289,1.62567862526312,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.515205058238611,0.640986253728404,0.660075999364704,0,0,1.6068392984416,2.03008508413456,1.07834031980251,0.460511024178389,3.1702411671442,2.14840489736547,2.46528379654188,1.53407929348982,1.69160867728801,0.826424576804891,0.576570202095319,1.14851441245126,0.708104465988849,0.929691098594572,2.20368642781448,2.0911118104818,1.54016790088044,0,3.47973196830029,1.29726953372744,0,1.116475108079,1.58189712359363,1.14378116354295,2.04718233049067,2.56763392820352,1.27281299170375,2.35484592059769,1.61885211824983,1.09814811894422,1.53156123049392,0.606547444719948,0,1.68503382495592,0.48763373908959,1.70599442741899,2.11300293513511,3.8219975194236,1.97967604735198,0,1.65409603063837,0.66343897524122,0.438450885253763,1.15755106853338,1.3117895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| |||
|short_description=p6@LPAR1 | |||
}} |
Revision as of 06:57, 14 September 2013
Short description: | p6@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | -12bp_to_ENST00000358883, NM_001401, NM_057159, uc004bfb.2, uc004bfc.2, uc011lwn.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | Q92633Q5VZX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.30e-14 | 76 |
muscle precursor cell | 1.75e-10 | 58 |
myoblast | 1.75e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-10 | 58 |
muscle cell | 4.75e-09 | 55 |
electrically responsive cell | 1.21e-07 | 61 |
electrically active cell | 1.21e-07 | 61 |
smooth muscle cell | 1.39e-07 | 43 |
smooth muscle myoblast | 1.39e-07 | 43 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.