Personal tools

FFCP PHASE1:Mm9::chr5:138404139..138404159,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=118446|HGNC=|MCL_coexpression_id=2357|UniProt=Q921C1|association_with_transcript=27bp_to_ENSMUST00000077119,NM_080450,uc009aeg.1_5end|description=CAGE_peak_2_at_Gjc3_5end|id=chr5:138404139..138404159,-|ontology_enrichment_celltype=CL:0000107!9.47e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.08e-10,9;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0002319,5.49e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.91e-18!102;UBERON:0000924!1.91e-18!102;UBERON:0006601!1.91e-18!102;UBERON:0000073!7.59e-15!75;UBERON:0001016!7.59e-15!75;UBERON:0001017!9.69e-14!73;UBERON:0005743!9.69e-14!73;UBERON:0002346!2.09e-10!71;UBERON:0003075!2.09e-10!71;UBERON:0007284!2.09e-10!71;UBERON:0000010!6.09e-09!11;UBERON:0000033!8.48e-08!63;UBERON:0002410!9.47e-08!9;UBERON:0001049!1.62e-07!52;UBERON:0005068!1.62e-07!52;UBERON:0006241!1.62e-07!52;UBERON:0007135!1.62e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0001016,2.02e-19,75;UBERON:0001017,6.59e-18,73;UBERON:0010371,7.86e-15,73;UBERON:0000010,9.29e-12,11;UBERON:0002346,2.19e-11,64;UBERON:0003075,2.19e-11,64;UBERON:0007284,2.19e-11,64;UBERON:0000073,1.93e-10,54;UBERON:0002410,4.08e-10,9;UBERON:0010314,5.80e-10,92;UBERON:0001049,1.80e-09,52;UBERON:0005068,1.80e-09,52;UBERON:0006241,1.80e-09,52;UBERON:0007135,1.80e-09,52;UBERON:0000955,3.59e-07,47;UBERON:0006238,3.59e-07,47;UBERON:0002616,9.99e-07,46|phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,10.5690864229407,34.8972294703549,0.122490799214954,0,0,2.20231761998777,8.17198963745201,9.21639199537461,0.131886287730194,0,0,9.77140496504833,7.31591393041184,7.33431589328689,19.7401152267357,23.0642122894547,0.559198337475902,12.2676433199758,10.4288752947364,0,0,0,0,0,0,1.96622188184453,0,0,0,137.88570796137,0,0,0,0,0,0,0.45673551887624,0,1.03909497345377,0.173485326766136,0.608930956624282,1.38369298353635,1.3565037649736,5.52666923537813,0.376999773989026,0,0.433798070759735,0,5.82360659810673,1.98757366614354,3.87900202508178,0,23.4224637609238,28.2753054198164,0,0,0,0,9.13722900369418,8.6925114535539,0.125654352112864,4.34560800480691,4.09144731728529,14.9607392082883,13.6282660976916,0,1.24406970610093,0,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.340182495756639,3.84341160854549,4.02917415606834,3.88055056108524,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,3.2925141825271,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,1.3413670069981,0.233530684734339,0.329119699826961,0.492502392237286,0.648550476366846,1.16959989940266,1.53685080703735,0.268412837520744,5.25724871410318,0.102904612379284,0,0.264450566663544,0,0,0,0.80673409849337,0,0,0,0.658795818896044,1.50801125280162,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0.952174563544055,0.585400943573396,0.945810864637146,0.664394068946325,2.55127629851979,1.14704320301017,1.20879487306127,0,0,0,0,0.275936746304732,13.9679013289379,25.3177243039159,0,8.33154059774431,14.8288863125641,14.8366722832723,39.637905182835,48.5106659843681,52.1348897352802,45.8583979877909,17.4068601720205,15.4895604692995,16.602086673754,3.53453448063988,0,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,1.22974059177571,1.03371317267288,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0,1.07021290561242,1.97458824722545,2.74018454203139,0,0,1.10264199027481,2.63818004706368,4.03661066739764,4.82503399425247,3.81991500810037,3.93938159388147,0.291480836629851,15.9465759729038,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.48350781023303,1.73572257023205,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,1.11063094942962,0.685861259894999,0.604957110821043,0,0,0.116876902181569,3.40095575422817,0,0,0,1.15913756419314,0,0.183151624267265,1.2862102744744,0,6.21227026878773,4.14292712856459,2.86447756719698,1.89038500578056,1.37016503954128,2.2661816921691,2.02506750069542,2.2516060161211,3.17199686288943,2.07104124700728,0,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.551530525350042,1.33348036680969,1.64828045791115,1.28367683836726,0.505394423527595,1.77435509923168,1.50901073108861,0.936415074698824,1.79270426733634,1.26358031702349,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,0,1.02860775715625,1.06485483695602,1.66905332963125,1.16277133305863,1.2234219453993,1.35383372626682,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.949080144993393,1.0835493061312,0.818462086339379,0.929621047115796,1.35034627686799,0.999242311751784,3.04111090979031,3.00819475667618,10.1382815996487,22.2797333310711,21.7955765483196|short_description=p2@Gjc3}}
|EntrezGene=118446
|HGNC=
|MCL_coexpression_id=2357
|UniProt=Q921C1
|association_with_transcript=27bp_to_ENSMUST00000077119,NM_080450,uc009aeg.1_5end
|description=CAGE_peak_2_at_Gjc3_5end
|id=chr5:138404139..138404159,-
|ontology_enrichment_celltype=CL:0000107!9.47e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000107,4.08e-10,9;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0002319,5.49e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.91e-18!102;UBERON:0000924!1.91e-18!102;UBERON:0006601!1.91e-18!102;UBERON:0000073!7.59e-15!75;UBERON:0001016!7.59e-15!75;UBERON:0001017!9.69e-14!73;UBERON:0005743!9.69e-14!73;UBERON:0002346!2.09e-10!71;UBERON:0003075!2.09e-10!71;UBERON:0007284!2.09e-10!71;UBERON:0000010!6.09e-09!11;UBERON:0000033!8.48e-08!63;UBERON:0002410!9.47e-08!9;UBERON:0001049!1.62e-07!52;UBERON:0005068!1.62e-07!52;UBERON:0006241!1.62e-07!52;UBERON:0007135!1.62e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0001016,2.02e-19,75;UBERON:0001017,6.59e-18,73;UBERON:0010371,7.86e-15,73;UBERON:0000010,9.29e-12,11;UBERON:0002346,2.19e-11,64;UBERON:0003075,2.19e-11,64;UBERON:0007284,2.19e-11,64;UBERON:0000073,1.93e-10,54;UBERON:0002410,4.08e-10,9;UBERON:0010314,5.80e-10,92;UBERON:0001049,1.80e-09,52;UBERON:0005068,1.80e-09,52;UBERON:0006241,1.80e-09,52;UBERON:0007135,1.80e-09,52;UBERON:0000955,3.59e-07,47;UBERON:0006238,3.59e-07,47;UBERON:0002616,9.99e-07,46
|phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,10.5690864229407,34.8972294703549,0.122490799214954,0,0,2.20231761998777,8.17198963745201,9.21639199537461,0.131886287730194,0,0,9.77140496504833,7.31591393041184,7.33431589328689,19.7401152267357,23.0642122894547,0.559198337475902,12.2676433199758,10.4288752947364,0,0,0,0,0,0,1.96622188184453,0,0,0,137.88570796137,0,0,0,0,0,0,0.45673551887624,0,1.03909497345377,0.173485326766136,0.608930956624282,1.38369298353635,1.3565037649736,5.52666923537813,0.376999773989026,0,0.433798070759735,0,5.82360659810673,1.98757366614354,3.87900202508178,0,23.4224637609238,28.2753054198164,0,0,0,0,9.13722900369418,8.6925114535539,0.125654352112864,4.34560800480691,4.09144731728529,14.9607392082883,13.6282660976916,0,1.24406970610093,0,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.340182495756639,3.84341160854549,4.02917415606834,3.88055056108524,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,3.2925141825271,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,1.3413670069981,0.233530684734339,0.329119699826961,0.492502392237286,0.648550476366846,1.16959989940266,1.53685080703735,0.268412837520744,5.25724871410318,0.102904612379284,0,0.264450566663544,0,0,0,0.80673409849337,0,0,0,0.658795818896044,1.50801125280162,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0.952174563544055,0.585400943573396,0.945810864637146,0.664394068946325,2.55127629851979,1.14704320301017,1.20879487306127,0,0,0,0,0.275936746304732,13.9679013289379,25.3177243039159,0,8.33154059774431,14.8288863125641,14.8366722832723,39.637905182835,48.5106659843681,52.1348897352802,45.8583979877909,17.4068601720205,15.4895604692995,16.602086673754,3.53453448063988,0,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,1.22974059177571,1.03371317267288,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0,1.07021290561242,1.97458824722545,2.74018454203139,0,0,1.10264199027481,2.63818004706368,4.03661066739764,4.82503399425247,3.81991500810037,3.93938159388147,0.291480836629851,15.9465759729038,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.48350781023303,1.73572257023205,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,1.11063094942962,0.685861259894999,0.604957110821043,0,0,0.116876902181569,3.40095575422817,0,0,0,1.15913756419314,0,0.183151624267265,1.2862102744744,0,6.21227026878773,4.14292712856459,2.86447756719698,1.89038500578056,1.37016503954128,2.2661816921691,2.02506750069542,2.2516060161211,3.17199686288943,2.07104124700728,0,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.551530525350042,1.33348036680969,1.64828045791115,1.28367683836726,0.505394423527595,1.77435509923168,1.50901073108861,0.936415074698824,1.79270426733634,1.26358031702349,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,0,1.02860775715625,1.06485483695602,1.66905332963125,1.16277133305863,1.2234219453993,1.35383372626682,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.949080144993393,1.0835493061312,0.818462086339379,0.929621047115796,1.35034627686799,0.999242311751784,3.04111090979031,3.00819475667618,10.1382815996487,22.2797333310711,21.7955765483196
|short_description=p2@Gjc3
}}

Revision as of 06:48, 14 September 2013

Short description:p2@Gjc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gjc3_5end
Coexpression cluster:MCL_coexpression_mm9:2357
Association with transcript: 27bp_to_ENSMUST00000077119, NM_080450, uc009aeg.1_5end
EntrezGene:Gjc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gjc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D534.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D912.27
Mouse Schwann, donor2.CNhs12573.11746-123F910.43
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6137.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B223.42
cerebellum, neonate N30.CNhs11135.1395-42I228.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F214.96
diencephalon, neonate N30.CNhs11201.1388-42B213.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A325.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E339.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D852.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D945.86
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H34.83
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D122.28
whole body, neonate N10.CNhs10518.761-6B421.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron4.08e-109
ectodermal cell1.08e-0844
neurectodermal cell1.08e-0844
neuron1.62e-0833
neuronal stem cell1.62e-0833
neuroblast1.62e-0833
electrically signaling cell1.62e-0833
neural cell5.49e-0843







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:138404139..138404159,-&oldid=3019356"