FFCP PHASE1:Mm9::chr5:137538522..137538532,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=214|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:137538522..137538532,-|id=chr5:137538522..137538532,-|ontology_enrichment_celltype=CL:0000680!1.30e-16!6;CL:0000183!1.30e-16!6;CL:0000187!1.30e-16!6;CL:0000056!1.30e-16!6;CL:0000222!3.25e-14!7;CL:0002494!7.86e-13!3;CL:0000737!7.86e-13!3;CL:0000746!7.86e-13!3;CL:0000513!7.86e-13!3;CL:0000355!5.21e-11!9;CL:0002604!1.35e-08!2;CL:0002605!1.35e-08!2;CL:0000325!2.28e-08!2;CL:0000217!2.28e-08!2;CL:0000328!2.28e-08!2;CL:0002573!2.28e-08!2;CL:0002376!2.28e-08!2;CL:0000218!2.28e-08!2;CL:0000692!2.28e-08!2;CL:0002377!2.28e-08!2;CL:0002375!2.28e-08!2|ontology_enrichment_celltype_v019_2=CL:0002494,8.02e-16,3;CL:0000737,8.02e-16,3;CL:0000746,8.02e-16,3;CL:0000513,8.02e-16,3;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.41e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.38e-13!3;UBERON:0000478!2.38e-13!3;UBERON:0000158!2.38e-13!3;UBERON:0001134!5.21e-11!9;UBERON:0002036!5.21e-11!9;UBERON:0002385!5.21e-11!9;UBERON:0000486!5.21e-11!9;UBERON:0001015!5.21e-11!9;UBERON:0004290!5.21e-11!9;UBERON:0003082!5.21e-11!9;UBERON:0000383!6.92e-10!10;UBERON:0001987!1.66e-09!2;UBERON:0003124!1.66e-09!2;UBERON:0004340!1.66e-09!2;UBERON:0002329!5.77e-09!11;UBERON:0003077!5.77e-09!11;UBERON:0003059!5.77e-09!11;UBERON:0007282!5.77e-09!11;UBERON:0009618!5.77e-09!11;UBERON:0007285!5.77e-09!11|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.50e-23,2;UBERON:0003124,9.50e-23,2;UBERON:0004340,9.50e-23,2;UBERON:0005631,1.12e-15,3;UBERON:0000478,1.12e-15,3;UBERON:0000158,1.12e-15,3;UBERON:0005795,4.02e-12,4;UBERON:0000995,4.02e-12,4;UBERON:0003975,5.59e-10,5;UBERON:0003134,9.78e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,6.17422646486273,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.151143120213571,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.503653849092235,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:137538522..137538532,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:137538522..137538532,- | |||
|id=chr5:137538522..137538532,- | |||
|ontology_enrichment_celltype=CL:0000680!1.30e-16!6;CL:0000183!1.30e-16!6;CL:0000187!1.30e-16!6;CL:0000056!1.30e-16!6;CL:0000222!3.25e-14!7;CL:0002494!7.86e-13!3;CL:0000737!7.86e-13!3;CL:0000746!7.86e-13!3;CL:0000513!7.86e-13!3;CL:0000355!5.21e-11!9;CL:0002604!1.35e-08!2;CL:0002605!1.35e-08!2;CL:0000325!2.28e-08!2;CL:0000217!2.28e-08!2;CL:0000328!2.28e-08!2;CL:0002573!2.28e-08!2;CL:0002376!2.28e-08!2;CL:0000218!2.28e-08!2;CL:0000692!2.28e-08!2;CL:0002377!2.28e-08!2;CL:0002375!2.28e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,8.02e-16,3;CL:0000737,8.02e-16,3;CL:0000746,8.02e-16,3;CL:0000513,8.02e-16,3;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.41e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.38e-13!3;UBERON:0000478!2.38e-13!3;UBERON:0000158!2.38e-13!3;UBERON:0001134!5.21e-11!9;UBERON:0002036!5.21e-11!9;UBERON:0002385!5.21e-11!9;UBERON:0000486!5.21e-11!9;UBERON:0001015!5.21e-11!9;UBERON:0004290!5.21e-11!9;UBERON:0003082!5.21e-11!9;UBERON:0000383!6.92e-10!10;UBERON:0001987!1.66e-09!2;UBERON:0003124!1.66e-09!2;UBERON:0004340!1.66e-09!2;UBERON:0002329!5.77e-09!11;UBERON:0003077!5.77e-09!11;UBERON:0003059!5.77e-09!11;UBERON:0007282!5.77e-09!11;UBERON:0009618!5.77e-09!11;UBERON:0007285!5.77e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,9.50e-23,2;UBERON:0003124,9.50e-23,2;UBERON:0004340,9.50e-23,2;UBERON:0005631,1.12e-15,3;UBERON:0000478,1.12e-15,3;UBERON:0000158,1.12e-15,3;UBERON:0005795,4.02e-12,4;UBERON:0000995,4.02e-12,4;UBERON:0003975,5.59e-10,5;UBERON:0003134,9.78e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,6.17422646486273,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.151143120213571,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.503653849092235,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:137538522..137538532,- | |||
}} |
Revision as of 06:44, 14 September 2013
Short description: | p@chr5:137538522..137538532, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137538522..137538532, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 8.02e-16 | 3 |
striated muscle cell | 8.02e-16 | 3 |
cardiac muscle cell | 8.02e-16 | 3 |
cardiac muscle myoblast | 8.02e-16 | 3 |
muscle precursor cell | 1.29e-08 | 6 |
muscle cell | 1.29e-08 | 6 |
myoblast | 1.29e-08 | 6 |
mesodermal cell | 1.41e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
placenta | 9.50e-23 | 2 |
chorion | 9.50e-23 | 2 |
allantois | 9.50e-23 | 2 |
extraembryonic membrane | 1.12e-15 | 3 |
extraembryonic structure | 1.12e-15 | 3 |
membranous layer | 1.12e-15 | 3 |
embryonic uterus | 4.02e-12 | 4 |
uterus | 4.02e-12 | 4 |
internal female genitalia | 5.59e-10 | 5 |
female reproductive organ | 9.78e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.