FFCP PHASE1:Mm9::chr5:134790355..134790369,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14886|HGNC=|MCL_coexpression_id=3504|UniProt=G3UWV2|association_with_transcript=-107bp_to_ENSMUST00000174867_5end|description=CAGE_peak_4_at_Gtf2i_5end|id=chr5:134790355..134790369,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!5.10e-09!86;UBERON:0000153!2.76e-08!94;UBERON:0000033!1.47e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.34e-09,92|phase1_expression=5.76535849577258,0.348975407639361,0,0.30246421130683,0,1.6787927191189,1.40167584357315,2.06597317506522,2.67498572088167,2.57470978954193,3.5955773327356,3.43020283679947,2.56801094896809,2.01066925563694,1.33243904726265,0.404950534779652,0,1.73504190947031,2.4680598049033,2.54633791078818,6.4632900514813,3.57447424323187,2.35079810225042,1.11994695955385,0.22940928106717,1.14846392823004,0,0.215471232685889,0.760093677825496,1.00812051903972,1.10865255327652,1.90509202037889,5.53558308826113,0,1.44425809875637,0.831173226792462,0.816677425049476,0.837063261473815,1.5626706890476,1.0470474879476,0,0,0.485510353031154,1.25896817975577,1.72340783073175,0.734187008646726,2.34717403304412,5.01457859675027,4.61340983742391,5.44403717407994,3.21968769738334,4.31257693094915,2.01339127269284,7.25362142011344,7.39406358113421,2.05807548828758,2.0057340795713,4.12537673821954,3.43937983461316,2.64495489636016,1.90149421051854,2.03306719241479,1.77858959222228,1.7997994345628,0.988866362566974,0,2.39680088414724,3.45796474789399,2.48855069540346,2.56511282830212,3.57552434297349,4.57041575046086,3.09215957332259,0.979926393719632,3.1629005436018,1.83843757322004,9.91042928994498,5.2351808614927,5.68344173048101,2.90149833006426,4.39140689291566,4.68822033501084,7.53794097303729,3.93933827022176,6.57032465440283,3.53554302568401,2.27794689278565,3.16879057903011,0.984440513331393,1.43585964202892,3.18850937571846,0.860423876981386,0.679971333707751,3.77792234146472,2.59910566979068,2.24013443548668,2.66844398250329,1.02258193546835,0.519572009205738,0.35333957451034,5.7745802108439,0,2.54805239706646,0,1.29894624606728,2.28023878927589,0.505524445014783,3.08296475241462,2.33044095282455,4.00793775475027,2.77576522825817,2.13125834818499,2.99800146432876,3.46662073271032,3.99801604261396,4.02133092254962,1.73036477414062,1.87979163995885,3.5384422077995,6.79420769779119,3.5334642953663,5.81850303762267,0,5.85561594023094,6.49284791121711,0.766371165625774,1.91704199209472,3.59941638596045,1.52484272487678,7.33974133083631,6.40500843946077,0.628271760564322,7.47444576826789,5.11430914660661,5.61027720310812,5.19172041816825,2.54598409625791,3.73220911830279,9.85618757891331,4.20883711772948,5.20481771850815,4.82794419310293,4.68161537493908,5.27466862425003,4.69451844144162,4.61209393025459,3.93547243150861,7.76110112217047,4.52692785158969,3.40390944302075,4.22282697993477,2.19195732427575,3.89266148915837,2.78601733217733,3.49829631893504,2.38841120182192,1.40442637462647,1.80143534980301,1.13665399758237,5.17814431338755,5.62862543954631,6.48223421259654,4.02466050494857,6.09969118416952,5.09081472528348,9.06882384526591,8.58474884478781,7.23945122676451,10.0381508447223,9.19337798842933,8.51222500231485,7.89479932096795,5.48875288227627,8.32079796314305,3.78521907415429,1.44066457330998,0.330418782983798,0.793351699990633,5.11891801284562,3.71578674976702,3.22168653305233,5.24377164020691,4.22518283305254,3.61428689613862,4.2707615539006,2.63518327558417,3.51869292320377,3.78017296878187,3.31438948102504,1.79763881730844,1.08069024937347,0.597423819763102,4.74169752382704,4.11294645395024,3.38123207019241,5.49858585182348,3.87904974335251,4.83937157243198,4.86921335856781,4.72352473534727,2.82597710114475,4.07210640941942,3.55743152504579,3.83743743147016,2.94838492669805,3.14806957338795,2.02860121388503,1.68824011826692,2.80088436959562,3.16465751195892,2.59416362840057,2.74561413188081,8.62609239164127,2.60498663367952,4.36852742360385,1.76805214562978,1.25578189465339,1.4473305640901,2.03228509183265,3.60033682363921,3.42226450528254,2.8856664581782,3.28566347603903,5.19269398069629,7.37935286746643,5.26860849216057,5.99013547603526,3.10050565508285,5.10255259703959,2.78567635016755,3.7990696010497,3.03763023021174,0,0,3.44234991113325,9.10591262805617,4.33486592967038,6.44664276257117,0.983609672260053,6.05930225290495,3.47059041357882,2.34263246577983,4.52389135238878,3.58453196928828,3.11918143715352,4.24614796183249,4.04810701674894,3.50707029493574,3.95287777946523,4.81981974632711,3.54850213020672,4.27357448801413,3.58351310577867,3.13443233647817,5.30980553359851,3.64170954232472,4.53485335447127,4.33791683438566,5.90603785761546,3.3817866273832,4.39328098385976,4.72593848320757,4.27796854061666,6.0046984007805,3.16255825724996,4.12542172992747,6.80879211507576,5.04171063287669,6.33857550535497,5.35842587578981,5.14286677562593,4.63758925765383,3.1264313914403,7.30715877875038,1.1733585403185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| ||
|EntrezGene=14886 | |||
|HGNC= | |||
|MCL_coexpression_id=3504 | |||
|UniProt=G3UWV2 | |||
|association_with_transcript=-107bp_to_ENSMUST00000174867_5end | |||
|description=CAGE_peak_4_at_Gtf2i_5end | |||
|id=chr5:134790355..134790369,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!5.10e-09!86;UBERON:0000153!2.76e-08!94;UBERON:0000033!1.47e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.34e-09,92 | |||
|phase1_expression=5.76535849577258,0.348975407639361,0,0.30246421130683,0,1.6787927191189,1.40167584357315,2.06597317506522,2.67498572088167,2.57470978954193,3.5955773327356,3.43020283679947,2.56801094896809,2.01066925563694,1.33243904726265,0.404950534779652,0,1.73504190947031,2.4680598049033,2.54633791078818,6.4632900514813,3.57447424323187,2.35079810225042,1.11994695955385,0.22940928106717,1.14846392823004,0,0.215471232685889,0.760093677825496,1.00812051903972,1.10865255327652,1.90509202037889,5.53558308826113,0,1.44425809875637,0.831173226792462,0.816677425049476,0.837063261473815,1.5626706890476,1.0470474879476,0,0,0.485510353031154,1.25896817975577,1.72340783073175,0.734187008646726,2.34717403304412,5.01457859675027,4.61340983742391,5.44403717407994,3.21968769738334,4.31257693094915,2.01339127269284,7.25362142011344,7.39406358113421,2.05807548828758,2.0057340795713,4.12537673821954,3.43937983461316,2.64495489636016,1.90149421051854,2.03306719241479,1.77858959222228,1.7997994345628,0.988866362566974,0,2.39680088414724,3.45796474789399,2.48855069540346,2.56511282830212,3.57552434297349,4.57041575046086,3.09215957332259,0.979926393719632,3.1629005436018,1.83843757322004,9.91042928994498,5.2351808614927,5.68344173048101,2.90149833006426,4.39140689291566,4.68822033501084,7.53794097303729,3.93933827022176,6.57032465440283,3.53554302568401,2.27794689278565,3.16879057903011,0.984440513331393,1.43585964202892,3.18850937571846,0.860423876981386,0.679971333707751,3.77792234146472,2.59910566979068,2.24013443548668,2.66844398250329,1.02258193546835,0.519572009205738,0.35333957451034,5.7745802108439,0,2.54805239706646,0,1.29894624606728,2.28023878927589,0.505524445014783,3.08296475241462,2.33044095282455,4.00793775475027,2.77576522825817,2.13125834818499,2.99800146432876,3.46662073271032,3.99801604261396,4.02133092254962,1.73036477414062,1.87979163995885,3.5384422077995,6.79420769779119,3.5334642953663,5.81850303762267,0,5.85561594023094,6.49284791121711,0.766371165625774,1.91704199209472,3.59941638596045,1.52484272487678,7.33974133083631,6.40500843946077,0.628271760564322,7.47444576826789,5.11430914660661,5.61027720310812,5.19172041816825,2.54598409625791,3.73220911830279,9.85618757891331,4.20883711772948,5.20481771850815,4.82794419310293,4.68161537493908,5.27466862425003,4.69451844144162,4.61209393025459,3.93547243150861,7.76110112217047,4.52692785158969,3.40390944302075,4.22282697993477,2.19195732427575,3.89266148915837,2.78601733217733,3.49829631893504,2.38841120182192,1.40442637462647,1.80143534980301,1.13665399758237,5.17814431338755,5.62862543954631,6.48223421259654,4.02466050494857,6.09969118416952,5.09081472528348,9.06882384526591,8.58474884478781,7.23945122676451,10.0381508447223,9.19337798842933,8.51222500231485,7.89479932096795,5.48875288227627,8.32079796314305,3.78521907415429,1.44066457330998,0.330418782983798,0.793351699990633,5.11891801284562,3.71578674976702,3.22168653305233,5.24377164020691,4.22518283305254,3.61428689613862,4.2707615539006,2.63518327558417,3.51869292320377,3.78017296878187,3.31438948102504,1.79763881730844,1.08069024937347,0.597423819763102,4.74169752382704,4.11294645395024,3.38123207019241,5.49858585182348,3.87904974335251,4.83937157243198,4.86921335856781,4.72352473534727,2.82597710114475,4.07210640941942,3.55743152504579,3.83743743147016,2.94838492669805,3.14806957338795,2.02860121388503,1.68824011826692,2.80088436959562,3.16465751195892,2.59416362840057,2.74561413188081,8.62609239164127,2.60498663367952,4.36852742360385,1.76805214562978,1.25578189465339,1.4473305640901,2.03228509183265,3.60033682363921,3.42226450528254,2.8856664581782,3.28566347603903,5.19269398069629,7.37935286746643,5.26860849216057,5.99013547603526,3.10050565508285,5.10255259703959,2.78567635016755,3.7990696010497,3.03763023021174,0,0,3.44234991113325,9.10591262805617,4.33486592967038,6.44664276257117,0.983609672260053,6.05930225290495,3.47059041357882,2.34263246577983,4.52389135238878,3.58453196928828,3.11918143715352,4.24614796183249,4.04810701674894,3.50707029493574,3.95287777946523,4.81981974632711,3.54850213020672,4.27357448801413,3.58351310577867,3.13443233647817,5.30980553359851,3.64170954232472,4.53485335447127,4.33791683438566,5.90603785761546,3.3817866273832,4.39328098385976,4.72593848320757,4.27796854061666,6.0046984007805,3.16255825724996,4.12542172992747,6.80879211507576,5.04171063287669,6.33857550535497,5.35842587578981,5.14286677562593,4.63758925765383,3.1264313914403,7.30715877875038,1.17335854031855,0.63549621259146,8.15955072803359,3.95727007059552,5.48979050766079,2.95533332147964,3.10368094408155,2.9545361954111,4.66369338607761,6.30446026835733,1.36696704638282,2.27025554759545,2.96311243791539,1.88368457004691,1.91371918809435,1.37266903923914,2.37969801991397,4.47844647435706,4.69879910935041,2.86401185404534,2.53068794864908,3.65975040828328,3.88819226958485,3.55450103224597,2.83871332870031,2.96701562046606,2.81021749466142,1.30877970992015,1.42576470620972,7.45607175704311,38.3311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| |||
|short_description=p4@Gtf2i | |||
}} | |||
Revision as of 06:36, 14 September 2013
| Short description: | p4@Gtf2i |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Gtf2i_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3504 |
| Association with transcript: | -107bp_to_ENSMUST00000174867_5end |
| EntrezGene: | Gtf2i |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 2.34e-09 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
