FFCP PHASE1:Hg19::chr9:100199913..100199937,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1259|description=CAGE_peak_at_chr9:100199913..100199937,-|id=chr9:100199913..100199937,-|ontology_enrichment_celltype=CL:0000242!4.65e-44!2;CL:0000540!5.37e-34!6;CL:0000031!5.37e-34!6;CL:0000404!5.37e-34!6;CL:0000047!1.03e-25!8;CL:0002319!1.36e-20!25;CL:0000312!2.52e-18!5;CL:0000240!1.89e-15!6;CL:0000311!1.89e-15!6;CL:0000079!1.89e-15!6;CL:0000237!1.89e-15!6;CL:0000036!1.89e-15!6;CL:0000357!1.89e-15!6;CL:0000114!1.89e-15!6;CL:0000362!7.68e-12!8;CL:0000133!3.14e-09!59;CL:0000221!9.91e-08!71;CL:0002159!1.20e-07!13|ontology_enrichment_celltype_v019=CL:0000540;3.84e-50;6!CL:0000404;3.84e-50;6!CL:0002319;7.71e-12;25|ontology_enrichment_celltype_v019_2=CL:0000540,3.84e-50,6;CL:0000031,3.84e-50,6;CL:0000404,3.84e-50,6;CL:0000047,7.14e-38,8;CL:0002319,7.72e-12,25|ontology_enrichment_development_v019=CL:0000031;3.84e-50;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!4.04e-10!20;UBERON:0001017!1.64e-09!82;UBERON:0002619!2.70e-09!22;UBERON:0005743!4.47e-09!86;UBERON:0000956!2.72e-08!25;UBERON:0000203!2.72e-08!25;UBERON:0000073!3.16e-08!94;UBERON:0001016!3.16e-08!94;UBERON:0004121!5.54e-08!169;UBERON:0000924!8.57e-08!173;UBERON:0006601!8.57e-08!173;UBERON:0001003!3.66e-07!14;UBERON:0007376!3.66e-07!14;UBERON:0007383!3.66e-07!14|ontology_enrichment_uberon_v019=UBERON:0001950;8.28e-15;20!UBERON:0002619;1.36e-13;22!UBERON:0000956;4.09e-12;25!UBERON:0000203;4.09e-12;25!UBERON:0002791;3.13e-09;32!UBERON:0001869;5.08e-09;32!UBERON:0003528;1.05e-08;34!UBERON:0002020;1.05e-08;34!UBERON:0001872;7.01e-08;5!UBERON:0002021;7.01e-08;5!UBERON:0000922;7.33e-08;49!UBERON:0001893;1.93e-07;34!UBERON:0002780;2.47e-07;41!UBERON:0001890;2.47e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.28e-15,20;UBERON:0001017,9.81e-15,81;UBERON:0002619,1.36e-13,22;UBERON:0001016,2.44e-13,89;UBERON:0000956,4.09e-12,25;UBERON:0000203,4.09e-12,25;UBERON:0002791,1.05e-09,32;UBERON:0001869,1.05e-09,32;UBERON:0003528,3.43e-09,34;UBERON:0002020,3.43e-09,34;UBERON:0001893,3.43e-09,34;UBERON:0002021,6.55e-08,5;UBERON:0001872,7.01e-08,5;UBERON:0002780,8.93e-08,41;UBERON:0001890,8.93e-08,41;UBERON:0003080,8.93e-08,41;UBERON:0006240,8.93e-08,41;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73288812777695,30.4879602908515,9.56908127479745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:100199913..100199937,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1259 | |||
|description=CAGE_peak_at_chr9:100199913..100199937,- | |||
|id=chr9:100199913..100199937,- | |||
|ontology_enrichment_celltype=CL:0000242!4.65e-44!2;CL:0000540!5.37e-34!6;CL:0000031!5.37e-34!6;CL:0000404!5.37e-34!6;CL:0000047!1.03e-25!8;CL:0002319!1.36e-20!25;CL:0000312!2.52e-18!5;CL:0000240!1.89e-15!6;CL:0000311!1.89e-15!6;CL:0000079!1.89e-15!6;CL:0000237!1.89e-15!6;CL:0000036!1.89e-15!6;CL:0000357!1.89e-15!6;CL:0000114!1.89e-15!6;CL:0000362!7.68e-12!8;CL:0000133!3.14e-09!59;CL:0000221!9.91e-08!71;CL:0002159!1.20e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.84e-50;6!CL:0000404;3.84e-50;6!CL:0002319;7.71e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.84e-50,6;CL:0000031,3.84e-50,6;CL:0000404,3.84e-50,6;CL:0000047,7.14e-38,8;CL:0002319,7.72e-12,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.84e-50;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!4.04e-10!20;UBERON:0001017!1.64e-09!82;UBERON:0002619!2.70e-09!22;UBERON:0005743!4.47e-09!86;UBERON:0000956!2.72e-08!25;UBERON:0000203!2.72e-08!25;UBERON:0000073!3.16e-08!94;UBERON:0001016!3.16e-08!94;UBERON:0004121!5.54e-08!169;UBERON:0000924!8.57e-08!173;UBERON:0006601!8.57e-08!173;UBERON:0001003!3.66e-07!14;UBERON:0007376!3.66e-07!14;UBERON:0007383!3.66e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.28e-15;20!UBERON:0002619;1.36e-13;22!UBERON:0000956;4.09e-12;25!UBERON:0000203;4.09e-12;25!UBERON:0002791;3.13e-09;32!UBERON:0001869;5.08e-09;32!UBERON:0003528;1.05e-08;34!UBERON:0002020;1.05e-08;34!UBERON:0001872;7.01e-08;5!UBERON:0002021;7.01e-08;5!UBERON:0000922;7.33e-08;49!UBERON:0001893;1.93e-07;34!UBERON:0002780;2.47e-07;41!UBERON:0001890;2.47e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.28e-15,20;UBERON:0001017,9.81e-15,81;UBERON:0002619,1.36e-13,22;UBERON:0001016,2.44e-13,89;UBERON:0000956,4.09e-12,25;UBERON:0000203,4.09e-12,25;UBERON:0002791,1.05e-09,32;UBERON:0001869,1.05e-09,32;UBERON:0003528,3.43e-09,34;UBERON:0002020,3.43e-09,34;UBERON:0001893,3.43e-09,34;UBERON:0002021,6.55e-08,5;UBERON:0001872,7.01e-08,5;UBERON:0002780,8.93e-08,41;UBERON:0001890,8.93e-08,41;UBERON:0003080,8.93e-08,41;UBERON:0006240,8.93e-08,41;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73288812777695,30.4879602908515,9.56908127479745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7727886584389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:100199913..100199937,- | |||
}} |
Revision as of 06:34, 14 September 2013
Short description: | p@chr9:100199913..100199937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:100199913..100199937, - |
Coexpression cluster: | C1259_Neurons_parietal_occipital_temporal_brain_duodenum_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.84e-50 | 6 |
neuroblast | 3.84e-50 | 6 |
electrically signaling cell | 3.84e-50 | 6 |
neuronal stem cell | 7.14e-38 | 8 |
neural cell | 7.72e-12 | 25 |
Ontology term | p-value | n |
---|---|---|
neocortex | 8.28e-15 | 20 |
central nervous system | 9.81e-15 | 81 |
regional part of cerebral cortex | 1.36e-13 | 22 |
nervous system | 2.44e-13 | 89 |
cerebral cortex | 4.09e-12 | 25 |
pallium | 4.09e-12 | 25 |
regional part of telencephalon | 1.05e-09 | 32 |
cerebral hemisphere | 1.05e-09 | 32 |
brain grey matter | 3.43e-09 | 34 |
gray matter | 3.43e-09 | 34 |
telencephalon | 3.43e-09 | 34 |
occipital lobe | 6.55e-08 | 5 |
parietal lobe | 7.01e-08 | 5 |
regional part of forebrain | 8.93e-08 | 41 |
forebrain | 8.93e-08 | 41 |
anterior neural tube | 8.93e-08 | 41 |
future forebrain | 8.93e-08 | 41 |
ectoderm-derived structure | 3.21e-07 | 171 |
ectoderm | 3.21e-07 | 171 |
presumptive ectoderm | 3.21e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.