FFCP PHASE1:Mm9::chr5:125869585..125869592,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22190|HGNC=|MCL_coexpression_id=0|UniProt=E9Q5F6|association_with_transcript=-29bp_to_ENSMUST00000108707_5end|description=CAGE_peak_13_at_Ubc_5end|id=chr5:125869585..125869592,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.41e-12,14;UBERON:0003135,2.49e-11,15;UBERON:0003101,1.13e-10,16;UBERON:0000079,1.13e-10,16;UBERON:0004176,4.31e-10,17;UBERON:0009196,4.31e-10,17;UBERON:0009117,4.31e-10,17;UBERON:0000991,1.42e-09,18;UBERON:0005564,1.42e-09,18;UBERON:0003133,2.29e-07,24;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,40.5858915852617,0,0,0,0,0,0,0,0,2.89900944991207,17.8578603879877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@Ubc}} | ||
|EntrezGene=22190 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=E9Q5F6 | |||
|association_with_transcript=-29bp_to_ENSMUST00000108707_5end | |||
|description=CAGE_peak_13_at_Ubc_5end | |||
|id=chr5:125869585..125869592,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.41e-12,14;UBERON:0003135,2.49e-11,15;UBERON:0003101,1.13e-10,16;UBERON:0000079,1.13e-10,16;UBERON:0004176,4.31e-10,17;UBERON:0009196,4.31e-10,17;UBERON:0009117,4.31e-10,17;UBERON:0000991,1.42e-09,18;UBERON:0005564,1.42e-09,18;UBERON:0003133,2.29e-07,24;UBERON:0005156,7.46e-07,26;UBERON:0000990,7.46e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,40.5858915852617,0,0,0,0,0,0,0,0,2.89900944991207,17.8578603879877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@Ubc | |||
}} |
Revision as of 06:29, 14 September 2013
Short description: | p13@Ubc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Ubc_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -29bp_to_ENSMUST00000108707_5end |
EntrezGene: | Ubc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 4.41e-12 | 14 |
male reproductive organ | 2.49e-11 | 15 |
male organism | 1.13e-10 | 16 |
male reproductive system | 1.13e-10 | 16 |
external genitalia | 4.31e-10 | 17 |
indifferent external genitalia | 4.31e-10 | 17 |
indifferent gonad | 4.31e-10 | 17 |
gonad | 1.42e-09 | 18 |
gonad primordium | 1.42e-09 | 18 |
reproductive organ | 2.29e-07 | 24 |
reproductive structure | 7.46e-07 | 26 |
reproductive system | 7.46e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.