FFCP PHASE1:Mm9::chr5:116009514..116009528,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11837|HGNC=|MCL_coexpression_id=81|UniProt=|association_with_transcript=-17bp_to_ENSMUST00000156359_5end|description=CAGE_peak_1_at_Rplp0_5end|id=chr5:116009514..116009528,+|ontology_enrichment_celltype=CL:0000063!2.41e-26!66;CL:0000144!4.20e-18!121;CL:0000012!4.20e-18!121;CL:0000219!4.75e-17!54;CL:0002371!9.03e-17!118;CL:0000988!1.22e-16!32;CL:0002032!1.22e-16!32;CL:0000037!1.22e-16!32;CL:0000566!1.22e-16!32;CL:0000837!1.22e-16!32;CL:0002320!2.39e-16!46;CL:0000134!2.39e-16!46;CL:0000548!5.61e-16!115;CL:0000004!5.61e-16!115;CL:0000255!5.61e-16!115;CL:0002031!1.00e-13!25;CL:0000034!4.36e-10!97;CL:0000066!2.71e-09!25;CL:0000049!3.66e-09!19;CL:0000542!1.10e-08!13;CL:0000051!1.10e-08!13;CL:0000838!1.13e-08!12;CL:0000738!1.27e-08!17;CL:0002087!1.27e-08!17;CL:0002076!4.01e-08!15;CL:0000084!4.55e-08!11;CL:0000827!4.55e-08!11;CL:0000723!7.35e-08!91;CL:0000048!7.35e-08!91;CL:0000763!8.99e-08!16;CL:0000223!1.82e-07!20;CL:0000791!2.80e-07!9;CL:0000789!2.80e-07!9;CL:0002420!2.80e-07!9;CL:0002419!2.80e-07!9;CL:0000790!2.80e-07!9|ontology_enrichment_celltype_v019_2=CL:0000219,4.75e-17,54;CL:0000988,1.22e-16,32;CL:0002032,1.22e-16,32;CL:0000037,1.22e-16,32;CL:0000837,1.22e-16,32;CL:0002320,2.39e-16,46;CL:0000134,2.39e-16,46;CL:0002031,1.00e-13,25;CL:0000034,4.36e-10,97;CL:0000066,2.71e-09,25;CL:0000049,3.66e-09,19;CL:0000542,1.10e-08,13;CL:0000051,1.10e-08,13;CL:0000838,1.13e-08,12;CL:0000738,1.27e-08,17;CL:0002087,1.27e-08,17;CL:0002076,4.01e-08,15;CL:0000084,4.55e-08,11;CL:0000827,4.55e-08,11;CL:0000723,7.35e-08,91;CL:0000048,7.35e-08,91;CL:0000763,8.99e-08,16;CL:0000223,1.82e-07,20;CL:0000791,2.80e-07,9;CL:0000789,2.80e-07,9;CL:0002420,2.80e-07,9;CL:0002419,2.80e-07,9;CL:0000790,2.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.39e-16!46;UBERON:0002193!7.01e-10!48;UBERON:0002390!1.64e-09!45;UBERON:0003061!1.64e-09!45;UBERON:0002405!8.69e-09!70;UBERON:0000490!3.25e-08!66;UBERON:0003929!2.07e-07!55;UBERON:0000072!6.01e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.39e-16,46;UBERON:0002193,7.01e-10,48;UBERON:0002405,7.01e-10,48;UBERON:0002390,1.64e-09,45;UBERON:0003061,1.64e-09,45;UBERON:0000490,3.25e-08,66;UBERON:0003929,2.07e-07,55;UBERON:0000072,6.01e-07,27|phase1_expression=24.0223270657191,22.6834014965585,25.0249581664245,38.7154190472742,54.0967388342055,47.3419546791529,94.8467320817834,94.2600261123507,295.797105240652,301.475109902728,196.215791586429,101.789274878049,156.13506569726,104.991903305216,28.647439516147,99.4153562884045,122.423328672426,98.266464509091,84.7367199683466,96.7608406099509,7.22867966284093,19.9574811913779,156.197473905083,61.1171055070813,63.7757801366733,36.7508457033613,44.7992476005438,33.1825698336269,55.4868384812612,28.4794046628722,44.1243716204056,185.428956650212,120.552698366576,142.633512913895,57.4814723305036,55.1899022590195,62.4758230162849,14.6486070757918,25.0027310247616,16.2292360631877,12.9410927366823,13.6609096991689,15.0508209439658,8.3091899863881,9.7321853970734,12.8482726513177,20.342174953049,13.7355848519681,8.78744730937887,9.52706505463989,13.9986421625363,28.7505128729943,107.380867876951,250.975301135925,220.813626036599,13.3774906738692,14.6132054368766,12.3761302146586,7.48570905180512,9.52183762689659,15.2119536841483,20.3306719241479,39.1289710288901,15.2982951937838,2.96659908770092,23.4458437932213,9.58720353658895,13.0634223809329,13.0648911508682,7.69533848490637,7.57169860864975,5.42736870367227,6.18431914664518,6.61450315760752,11.6931474642248,10.1114066527102,0,5.61824287574826,4.45458946443106,6.59431438650969,7.50198677539759,8.33461392890816,8.09630697104005,6.19038871034848,5.65353516774197,7.36571463684169,5.83723891276322,8.01517617048792,85.6463246598312,65.520542612583,77.1039539946463,66.2526385275668,27.19885334831,7.55584468292944,10.3964226791627,13.4408066129201,7.44355426698285,5.79463096765396,69.362863228966,104.23517448055,28.0278405355594,47.4807966432976,38.2207859559969,35.5533351576666,92.8746565938109,114.77201906022,121.325866803548,5.02409070763864,8.54495016035667,7.42210695324124,17.6955033301459,9.13396434936424,11.992005857315,9.49552635481522,7.4080885495494,4.90099706185734,10.6293836125781,7.08536848907567,19.4614321428972,9.70601099684455,10.8212344045593,13.5765070877862,3.72783522436244,6.73395833126558,8.58731497935166,7.66371165625774,41.2164028300366,99.5838533449057,44.6016497026457,3.2953940669061,5.49000723382352,7.16229807043327,2.08589184230732,3.3243009452943,3.53239675751252,4.05603157669394,11.5078481150857,9.33052279575698,10.6143558542143,3.15662783829711,10.4096354370163,14.7137346837423,8.46292010085141,10.8507468841715,6.53150391852747,7.55870949680614,8.33945348581587,5.43277078551933,12.0718076042392,12.2918952109083,11.9646764431485,12.9325482132269,9.73165372289593,12.8853301613202,10.906453229621,11.9420560091096,50.5593494865529,117.607993551425,20.7439354558783,13.6703009873431,8.911990279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| ||
|EntrezGene=11837 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENSMUST00000156359_5end | |||
|description=CAGE_peak_1_at_Rplp0_5end | |||
|id=chr5:116009514..116009528,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.41e-26!66;CL:0000144!4.20e-18!121;CL:0000012!4.20e-18!121;CL:0000219!4.75e-17!54;CL:0002371!9.03e-17!118;CL:0000988!1.22e-16!32;CL:0002032!1.22e-16!32;CL:0000037!1.22e-16!32;CL:0000566!1.22e-16!32;CL:0000837!1.22e-16!32;CL:0002320!2.39e-16!46;CL:0000134!2.39e-16!46;CL:0000548!5.61e-16!115;CL:0000004!5.61e-16!115;CL:0000255!5.61e-16!115;CL:0002031!1.00e-13!25;CL:0000034!4.36e-10!97;CL:0000066!2.71e-09!25;CL:0000049!3.66e-09!19;CL:0000542!1.10e-08!13;CL:0000051!1.10e-08!13;CL:0000838!1.13e-08!12;CL:0000738!1.27e-08!17;CL:0002087!1.27e-08!17;CL:0002076!4.01e-08!15;CL:0000084!4.55e-08!11;CL:0000827!4.55e-08!11;CL:0000723!7.35e-08!91;CL:0000048!7.35e-08!91;CL:0000763!8.99e-08!16;CL:0000223!1.82e-07!20;CL:0000791!2.80e-07!9;CL:0000789!2.80e-07!9;CL:0002420!2.80e-07!9;CL:0002419!2.80e-07!9;CL:0000790!2.80e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.75e-17,54;CL:0000988,1.22e-16,32;CL:0002032,1.22e-16,32;CL:0000037,1.22e-16,32;CL:0000837,1.22e-16,32;CL:0002320,2.39e-16,46;CL:0000134,2.39e-16,46;CL:0002031,1.00e-13,25;CL:0000034,4.36e-10,97;CL:0000066,2.71e-09,25;CL:0000049,3.66e-09,19;CL:0000542,1.10e-08,13;CL:0000051,1.10e-08,13;CL:0000838,1.13e-08,12;CL:0000738,1.27e-08,17;CL:0002087,1.27e-08,17;CL:0002076,4.01e-08,15;CL:0000084,4.55e-08,11;CL:0000827,4.55e-08,11;CL:0000723,7.35e-08,91;CL:0000048,7.35e-08,91;CL:0000763,8.99e-08,16;CL:0000223,1.82e-07,20;CL:0000791,2.80e-07,9;CL:0000789,2.80e-07,9;CL:0002420,2.80e-07,9;CL:0002419,2.80e-07,9;CL:0000790,2.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.39e-16!46;UBERON:0002193!7.01e-10!48;UBERON:0002390!1.64e-09!45;UBERON:0003061!1.64e-09!45;UBERON:0002405!8.69e-09!70;UBERON:0000490!3.25e-08!66;UBERON:0003929!2.07e-07!55;UBERON:0000072!6.01e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.39e-16,46;UBERON:0002193,7.01e-10,48;UBERON:0002405,7.01e-10,48;UBERON:0002390,1.64e-09,45;UBERON:0003061,1.64e-09,45;UBERON:0000490,3.25e-08,66;UBERON:0003929,2.07e-07,55;UBERON:0000072,6.01e-07,27 | |||
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| |||
|short_description=p1@Rplp0 | |||
}} |
Revision as of 06:08, 14 September 2013
Short description: | p1@Rplp0 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rplp0_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -17bp_to_ENSMUST00000156359_5end |
EntrezGene: | Rplp0 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.75e-17 | 54 |
hematopoietic cell | 1.22e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.22e-16 | 32 |
hematopoietic stem cell | 1.22e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.22e-16 | 32 |
connective tissue cell | 2.39e-16 | 46 |
mesenchymal cell | 2.39e-16 | 46 |
hematopoietic lineage restricted progenitor cell | 1.00e-13 | 25 |
stem cell | 4.36e-10 | 97 |
epithelial cell | 2.71e-09 | 25 |
common myeloid progenitor | 3.66e-09 | 19 |
lymphocyte | 1.10e-08 | 13 |
common lymphoid progenitor | 1.10e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 12 |
leukocyte | 1.27e-08 | 17 |
nongranular leukocyte | 1.27e-08 | 17 |
endo-epithelial cell | 4.01e-08 | 15 |
T cell | 4.55e-08 | 11 |
pro-T cell | 4.55e-08 | 11 |
somatic stem cell | 7.35e-08 | 91 |
multi fate stem cell | 7.35e-08 | 91 |
myeloid cell | 8.99e-08 | 16 |
endodermal cell | 1.82e-07 | 20 |
mature alpha-beta T cell | 2.80e-07 | 9 |
alpha-beta T cell | 2.80e-07 | 9 |
immature T cell | 2.80e-07 | 9 |
mature T cell | 2.80e-07 | 9 |
immature alpha-beta T cell | 2.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.39e-16 | 46 |
hemolymphoid system | 7.01e-10 | 48 |
immune system | 7.01e-10 | 48 |
hematopoietic system | 1.64e-09 | 45 |
blood island | 1.64e-09 | 45 |
unilaminar epithelium | 3.25e-08 | 66 |
gut epithelium | 2.07e-07 | 55 |
segment of respiratory tract | 6.01e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.