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FFCP PHASE1:Mm9::chr5:104522083..104522126,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:104522083..104522126,-|id=chr5:104522083..104522126,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.99e-11!73;UBERON:0005743!2.99e-11!73;UBERON:0000073!1.24e-10!75;UBERON:0001016!1.24e-10!75;UBERON:0001049!1.99e-09!52;UBERON:0005068!1.99e-09!52;UBERON:0006241!1.99e-09!52;UBERON:0007135!1.99e-09!52;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0002616!2.71e-08!49;UBERON:0002346!3.27e-08!71;UBERON:0003075!3.27e-08!71;UBERON:0007284!3.27e-08!71;UBERON:0002021!5.07e-08!10;UBERON:0000411!5.07e-08!10;UBERON:0001950!5.07e-08!10;UBERON:0000468!6.59e-08!333;UBERON:0004121!6.61e-08!102;UBERON:0000924!6.61e-08!102;UBERON:0006601!6.61e-08!102;UBERON:0000033!1.28e-07!63;UBERON:0004111!1.34e-07!122;UBERON:0002020!2.60e-07!34;UBERON:0000025!4.78e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-11,54;UBERON:0001017,2.63e-11,73;UBERON:0001016,1.57e-10,75;UBERON:0001049,2.86e-10,52;UBERON:0005068,2.86e-10,52;UBERON:0006241,2.86e-10,52;UBERON:0007135,2.86e-10,52;UBERON:0010314,1.35e-09,92;UBERON:0002021,1.78e-09,10;UBERON:0000411,1.78e-09,10;UBERON:0001950,1.78e-09,10;UBERON:0004111,1.78e-09,122;UBERON:0000025,9.10e-09,114;UBERON:0002346,2.04e-08,64;UBERON:0003075,2.04e-08,64;UBERON:0007284,2.04e-08,64;UBERON:0002020,4.33e-08,34;UBERON:0000955,1.36e-07,47;UBERON:0006238,1.36e-07,47;UBERON:0002616,3.66e-07,46|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.777719596297134,1.1198913730029,2.87505128729943,0,0,0,0.514518872071894,2.0057340795713,2.06268836910977,1.61853168687678,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0.810035629990144,0,11.9973413449598,11.0434270475807,0.367472397644862,0.287536413054709,0,30.8324466798288,40.6045735110897,43.9314685112856,0,0.274462930807229,0,20.1011759280994,23.0732670112989,33.1572197675678,40.0694876244188,30.3251680102089,2.79599168737951,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0.779358013808606,0.70667914902068,1.26759077799012,0,2.54805239706646,0,0,0,0,1.1418387971906,0,0.148442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0.904335843315735,1.17588707135705,0.502666365318702,0,0.144599356919912,0,1.61766849947409,0.883366073841574,2.42437626567611,0,8.78342391034641,7.12118803165747,0.510914110417183,0,0,0,12.4326230706003,8.6925114535539,1.13088916901578,9.38651329038293,11.7629110371952,11.0127663616567,13.9527486238272,5.09196819251581,0.497627882440372,0,0.420883711772948,0.390361328888111,0,0.360124259610698,1.50704817835715,0.748401490664606,0.896796041993948,0.655912071918102,3.10444044886819,0.215567992932842,0,0.175951124163949,0.219195732427575,1.39023624612799,1.0447564995665,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,2.55793501271625,2.77680803197281,5.8133486187602,2.41446061259657,2.33530684734339,1.31647879930784,15.2675741593559,4.13450928683864,1.31579988682799,3.29325172936576,1.47627060636409,3.99550902271842,2.98423375899925,0,0.793351699990633,1.49301775374664,3.0190767341857,0.515469845288373,1.00841762311671,0.667134131534611,0.951128130562796,3.32170343081158,2.14108641141214,3.77002813200404,0.994782360205754,2.9244613067868,2.69645822596266,4.32276099749388,3.18626037206988,0,0.456994050438915,0,1.62921062276251,1.55161989734101,0.701358198903186,0.69560190836683,1.03327103585722,1.72698600625512,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0,15.814502718009,0.744281895337007,0.624075346229121,0.252578877947112,0,0,1.10851914099963,0.189491411770485,0.651859905768103,4.07388205860452,7.51008794523207,2.01007508930179,4.76087281772027,8.19561321002755,4.09851374676097,6.2010113101657,5.89982644032702,9.66793556822854,9.84304396635605,6.219909519005,0,0,0,0.275936746304732,11.559642479121,11.1351102262593,0,0.757412781613119,1.26203287766503,2.34263246577983,1.07711698866399,0.716906393857656,0.222798674082394,0,0.809621403349789,1.16902343164525,0.395287777946524,5.78378369559253,1.98716119291576,2.13678724400706,3.4206261464251,4.78413356620353,2.65490276679926,1.69946445308487,2.11626489875326,2.07465587731488,0.885905678642318,1.53717573971964,1.29214146584111,1.45413491791002,2.13898427030833,1.26414703174326,0,2.06271086496374,0.340439605753788,2.16073312837572,0.388076051348264,1.28602221018955,0.532020700926821,1.24858172321449,1.81003922662333,0.608929898229199,0.469343416127421,0.42366414172764,0.441056796109924,0.49465875882444,0.968786560175433,0.361877549568935,0.716234064018819,0.656563598980245,3.20628920292836,14.6485988588303,0.170870880797853,0.82554747185289,1.66675074632741,0.753473828018764,0.683471138605126,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,3.88819226958485,7.10900206449194,5.02233896616208,6.47348862647139,2.81021749466142,2.6175594198403,3.49960427887841,0,0,0,0.165458490457098,0.583353565032143,0.774958940866387,2.87225413334323,2.8165737274981,1.5624526181274,0.524296722128554,1.20792060413003,1.15212002503146,0.632022241256357,0.405450430580328,1.02710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,1.00966449948148,0.228620419965,0.201652370273681,0.584747284438515,0.192423683280659,0.233753804363138,1.36038230169127,0,0,0,3.86379188064381,3.37828455812128,4.57879060668163,3.21552568618599,1.00314420807073,39.5326289831947,34.0640675015311,38.3839994004396,22.3409137046794,16.4419804744954,33.2373314851468,21.6007200074178,27.4695933966774,34.4388230827996,25.888015587591,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.888986911206461,0.206035057238894,1.60459604795908,0.505394423527595,1.77435509923168,1.50901073108861,1.40462261204824,0.512201219238954,0.574354689556133,0.952587382566147,0.927074607558844,0,2.06042950401653,2.50238164228475,3.42869252385415,1.77475806159337,0.953744759789284,1.45346416632329,1.50575008664529,1.18460451048347,1.64635175585495,2.63069711437843,1.49384525230448,0.561142271657738,1.06771516311757,1.67457620038458,1.63692417267876,1.23949472948773,0.385813221962283,0,0.467863216890817,0.214871054048298,1.14772999241306,0.220591419119515,0.927471342481686|short_description=p@chr5:104522083..104522126,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=138
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr5:104522083..104522126,-
|id=chr5:104522083..104522126,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.99e-11!73;UBERON:0005743!2.99e-11!73;UBERON:0000073!1.24e-10!75;UBERON:0001016!1.24e-10!75;UBERON:0001049!1.99e-09!52;UBERON:0005068!1.99e-09!52;UBERON:0006241!1.99e-09!52;UBERON:0007135!1.99e-09!52;UBERON:0000955!1.09e-08!50;UBERON:0006238!1.09e-08!50;UBERON:0002616!2.71e-08!49;UBERON:0002346!3.27e-08!71;UBERON:0003075!3.27e-08!71;UBERON:0007284!3.27e-08!71;UBERON:0002021!5.07e-08!10;UBERON:0000411!5.07e-08!10;UBERON:0001950!5.07e-08!10;UBERON:0000468!6.59e-08!333;UBERON:0004121!6.61e-08!102;UBERON:0000924!6.61e-08!102;UBERON:0006601!6.61e-08!102;UBERON:0000033!1.28e-07!63;UBERON:0004111!1.34e-07!122;UBERON:0002020!2.60e-07!34;UBERON:0000025!4.78e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-11,54;UBERON:0001017,2.63e-11,73;UBERON:0001016,1.57e-10,75;UBERON:0001049,2.86e-10,52;UBERON:0005068,2.86e-10,52;UBERON:0006241,2.86e-10,52;UBERON:0007135,2.86e-10,52;UBERON:0010314,1.35e-09,92;UBERON:0002021,1.78e-09,10;UBERON:0000411,1.78e-09,10;UBERON:0001950,1.78e-09,10;UBERON:0004111,1.78e-09,122;UBERON:0000025,9.10e-09,114;UBERON:0002346,2.04e-08,64;UBERON:0003075,2.04e-08,64;UBERON:0007284,2.04e-08,64;UBERON:0002020,4.33e-08,34;UBERON:0000955,1.36e-07,47;UBERON:0006238,1.36e-07,47;UBERON:0002616,3.66e-07,46
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.777719596297134,1.1198913730029,2.87505128729943,0,0,0,0.514518872071894,2.0057340795713,2.06268836910977,1.61853168687678,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0.810035629990144,0,11.9973413449598,11.0434270475807,0.367472397644862,0.287536413054709,0,30.8324466798288,40.6045735110897,43.9314685112856,0,0.274462930807229,0,20.1011759280994,23.0732670112989,33.1572197675678,40.0694876244188,30.3251680102089,2.79599168737951,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0.779358013808606,0.70667914902068,1.26759077799012,0,2.54805239706646,0,0,0,0,1.1418387971906,0,0.148442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0.904335843315735,1.17588707135705,0.502666365318702,0,0.144599356919912,0,1.61766849947409,0.883366073841574,2.42437626567611,0,8.78342391034641,7.12118803165747,0.510914110417183,0,0,0,12.4326230706003,8.6925114535539,1.13088916901578,9.38651329038293,11.7629110371952,11.0127663616567,13.9527486238272,5.09196819251581,0.497627882440372,0,0.420883711772948,0.390361328888111,0,0.360124259610698,1.50704817835715,0.748401490664606,0.896796041993948,0.655912071918102,3.10444044886819,0.215567992932842,0,0.175951124163949,0.219195732427575,1.39023624612799,1.0447564995665,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,2.55793501271625,2.77680803197281,5.8133486187602,2.41446061259657,2.33530684734339,1.31647879930784,15.2675741593559,4.13450928683864,1.31579988682799,3.29325172936576,1.47627060636409,3.99550902271842,2.98423375899925,0,0.793351699990633,1.49301775374664,3.0190767341857,0.515469845288373,1.00841762311671,0.667134131534611,0.951128130562796,3.32170343081158,2.14108641141214,3.77002813200404,0.994782360205754,2.9244613067868,2.69645822596266,4.32276099749388,3.18626037206988,0,0.456994050438915,0,1.62921062276251,1.55161989734101,0.701358198903186,0.69560190836683,1.03327103585722,1.72698600625512,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0,15.814502718009,0.744281895337007,0.624075346229121,0.252578877947112,0,0,1.10851914099963,0.189491411770485,0.651859905768103,4.07388205860452,7.51008794523207,2.01007508930179,4.76087281772027,8.19561321002755,4.09851374676097,6.2010113101657,5.89982644032702,9.66793556822854,9.84304396635605,6.219909519005,0,0,0,0.275936746304732,11.559642479121,11.1351102262593,0,0.757412781613119,1.26203287766503,2.34263246577983,1.07711698866399,0.716906393857656,0.222798674082394,0,0.809621403349789,1.16902343164525,0.395287777946524,5.78378369559253,1.98716119291576,2.13678724400706,3.4206261464251,4.78413356620353,2.65490276679926,1.69946445308487,2.11626489875326,2.07465587731488,0.885905678642318,1.53717573971964,1.29214146584111,1.45413491791002,2.13898427030833,1.26414703174326,0,2.06271086496374,0.340439605753788,2.16073312837572,0.388076051348264,1.28602221018955,0.532020700926821,1.24858172321449,1.81003922662333,0.608929898229199,0.469343416127421,0.42366414172764,0.441056796109924,0.49465875882444,0.968786560175433,0.361877549568935,0.716234064018819,0.656563598980245,3.20628920292836,14.6485988588303,0.170870880797853,0.82554747185289,1.66675074632741,0.753473828018764,0.683471138605126,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,3.88819226958485,7.10900206449194,5.02233896616208,6.47348862647139,2.81021749466142,2.6175594198403,3.49960427887841,0,0,0,0.165458490457098,0.583353565032143,0.774958940866387,2.87225413334323,2.8165737274981,1.5624526181274,0.524296722128554,1.20792060413003,1.15212002503146,0.632022241256357,0.405450430580328,1.02710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.590758108698309,1.00966449948148,0.228620419965,0.201652370273681,0.584747284438515,0.192423683280659,0.233753804363138,1.36038230169127,0,0,0,3.86379188064381,3.37828455812128,4.57879060668163,3.21552568618599,1.00314420807073,39.5326289831947,34.0640675015311,38.3839994004396,22.3409137046794,16.4419804744954,33.2373314851468,21.6007200074178,27.4695933966774,34.4388230827996,25.888015587591,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.888986911206461,0.206035057238894,1.60459604795908,0.505394423527595,1.77435509923168,1.50901073108861,1.40462261204824,0.512201219238954,0.574354689556133,0.952587382566147,0.927074607558844,0,2.06042950401653,2.50238164228475,3.42869252385415,1.77475806159337,0.953744759789284,1.45346416632329,1.50575008664529,1.18460451048347,1.64635175585495,2.63069711437843,1.49384525230448,0.561142271657738,1.06771516311757,1.67457620038458,1.63692417267876,1.23949472948773,0.385813221962283,0,0.467863216890817,0.214871054048298,1.14772999241306,0.22059141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|short_description=p@chr5:104522083..104522126,-
}}

Revision as of 05:47, 14 September 2013

Short description:p@chr5:104522083..104522126, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:104522083..104522126, -
Coexpression cluster:MCL_coexpression_mm9:138
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr5:104522083..104522126-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.43
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B213.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G115.27
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A49.67
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H26.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A311.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A139.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.89
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.17e-1154
central nervous system2.63e-1173
nervous system1.57e-1075
neural tube2.86e-1052
neural rod2.86e-1052
future spinal cord2.86e-1052
neural keel2.86e-1052
structure with developmental contribution from neural crest1.35e-0992
occipital lobe1.78e-0910
visual cortex1.78e-0910
neocortex1.78e-0910
anatomical conduit1.78e-09122
tube9.10e-09114
neurectoderm2.04e-0864
neural plate2.04e-0864
presumptive neural plate2.04e-0864
gray matter4.33e-0834
brain1.36e-0747
future brain1.36e-0747
regional part of brain3.66e-0746







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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