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FFCP PHASE1:Mm9::chr4:97444297..97444323,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18027|HGNC=|MCL_coexpression_id=1809|UniProt=Q02780,F8WH09,E9Q7H3,Q05B39,B1AUB7,Q3UFE1|association_with_transcript=0bp_to_ENSMUST00000075448,ENSMUST00000092532,ENSMUST00000097969,ENSMUST00000172094,NM_001122953,NM_010905,uc008ttt.2,uc008ttu.2,uc008ttv.2,uc008ttw.2_5end|description=CAGE_peak_2_at_Nfia_5end|id=chr4:97444297..97444323,+|ontology_enrichment_celltype=CL:0002319!9.76e-09!43;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0000055!2.44e-08!50;CL:0000393!4.35e-07!39;CL:0000211!4.35e-07!39;CL:0000540!5.72e-07!33;CL:0000047!5.72e-07!33;CL:0000031!5.72e-07!33;CL:0000404!5.72e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.05e-08,43;CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0000393,4.28e-07,39;CL:0000211,4.28e-07,39;CL:0000540,5.63e-07,33;CL:0000047,5.63e-07,33;CL:0000031,5.63e-07,33;CL:0000404,5.63e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.45e-13!333;UBERON:0000922!3.06e-10!328;UBERON:0001017!3.82e-09!73;UBERON:0005743!3.82e-09!73;UBERON:0000073!3.16e-08!75;UBERON:0001016!3.16e-08!75;UBERON:0004121!4.60e-08!102;UBERON:0000924!4.60e-08!102;UBERON:0006601!4.60e-08!102;UBERON:0004111!7.26e-08!122;UBERON:0000479!2.94e-07!349;UBERON:0000025!8.00e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.42e-09,92;UBERON:0001017,3.73e-09,73;UBERON:0000922,1.11e-08,320;UBERON:0004121,2.22e-08,95;UBERON:0000924,2.22e-08,95;UBERON:0006601,2.22e-08,95;UBERON:0001016,3.32e-08,75;UBERON:0004111,7.71e-08,122;UBERON:0000479,1.58e-07,349;UBERON:0000025,8.47e-07,114|phase1_expression=17.7765220286321,0.697950815278722,0,1.20985684522732,1.00179145989269,2.18243053485457,3.03696432774183,0,0,0.234064526321993,0,0,0.171200729931206,0,20.9859149943868,14.5782192520675,11.1929900500503,0.946386496074713,0.959801035240171,0.42438965179803,13.7770130044733,0,0,2.07990149631429,2.06468352960453,0,1.29228598847722,1.72376986148711,1.90023419456374,2.26827116783938,0.886922042621219,0,0.61506478758457,0,4.62162591602039,1.99481574430191,3.47087905646027,0,0,0,0,0,0.485510353031154,11.2048167998264,11.1514624341466,10.8292583775392,21.1245662973971,21.8025156380447,29.2182623036848,26.8313260722511,26.3174472655682,44.5632949531412,0,0,0,19.551717138732,48.4241513496499,21.6582278756526,16.9945827122062,13.7537654610729,10.1413024560989,9.14880236586657,10.6715375533337,0,1.97773272513395,0.7104801149461,24.2676089519908,46.8746332492297,114.991780050102,78.0334323557172,96.5391572602843,23.9946826899195,20.5407743085001,28.1728838194394,24.4405951096503,25.7381260250806,20.9220173898839,16.2162919368188,18.5863905240055,11.6059933202571,9.69769022185542,18.7528813400434,22.8930059181132,13.5063026407603,22.0029476798607,23.8649154233671,22.4947255662583,20.8767379324337,0.605809546665472,4.08086424576642,36.5229255764114,2.58127163094416,0.679971333707751,3.77792234146472,9.74664626171504,5.37632264516803,7.02222100658759,3.06774580640504,2.59786004602869,3.88673531961374,12.9575946194546,5.13305909657271,12.7402619853323,7.11066703153331,1.08245520505607,2.28023878927589,1.51657333504435,7.65031994117702,23.8222852955398,15.7348667408714,13.7053408145247,9.43842982767638,10.6083128737787,8.59119051149949,16.9327738275415,20.3579877954074,2.96633961281249,49.4529800666098,5.30766331169925,21.353224193058,10.1587098491781,11.6370060752453,5.59175283654366,44.7954619427667,55.5033773055656,4.59822699375465,0,0,0,16.926342252745,13.2675174817402,11.3088916901578,11.298580812498,12.5300574091862,14.3373750746096,12.3303359931496,27.4966282395854,12.9383249434497,8.08712826987759,32.6184876624035,8.45782879257574,8.73627996847197,11.1638520479317,13.7141384230501,11.4981683565744,11.5302348256365,11.7127155699661,13.4525752784288,16.1675994699632,37.2538977930604,49.9701192625615,35.9481001181223,44.2095126268701,35.521720985261,26.3401134602168,23.8841120182192,0,0,0,14.2916783049496,15.9477720787145,19.0865785148676,19.8865577891577,17.1184881620241,20.5175260140213,21.1605889722871,22.534965717568,27.9069168257535,30.9372517837343,34.47516745661,41.9936433447533,31.2867973090211,30.297915910165,25.633425983231,20.8187049078486,60.3021028542607,0.991256348951394,4.7601101999438,8.10495352033889,12.5407802804637,15.3352278973291,10.6892268050372,9.33987784148455,5.1360919050391,4.2707615539006,6.91735609840846,10.8074139784116,11.1415624343044,9.16331209459865,9.88701349519644,5.61958929674205,5.97423819763102,7.58671603812327,11.3106027483632,11.270773567308,9.57161240872977,8.33995694820791,10.5203729835478,11.6355228308633,8.85660887877613,8.79192875911699,5.18268088471562,5.92905254174298,4.33797274861845,3.73462090715086,2.69834534861824,4.26006254915856,2.894125917029,3.31013607315846,7.48009957372108,10.7009249671523,5.49122826376163,23.0029130443767,9.67566463938109,9.36113019343682,10.1031551178845,6.45830688678884,3.37710464954357,19.7685913478267,19.5176154123599,17.9261474086228,13.4098617762399,14.5507953938871,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|EntrezGene=18027
|HGNC=
|MCL_coexpression_id=1809
|UniProt=Q02780,F8WH09,E9Q7H3,Q05B39,B1AUB7,Q3UFE1
|association_with_transcript=0bp_to_ENSMUST00000075448,ENSMUST00000092532,ENSMUST00000097969,ENSMUST00000172094,NM_001122953,NM_010905,uc008ttt.2,uc008ttu.2,uc008ttv.2,uc008ttw.2_5end
|description=CAGE_peak_2_at_Nfia_5end
|id=chr4:97444297..97444323,+
|ontology_enrichment_celltype=CL:0002319!9.76e-09!43;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0000055!2.44e-08!50;CL:0000393!4.35e-07!39;CL:0000211!4.35e-07!39;CL:0000540!5.72e-07!33;CL:0000047!5.72e-07!33;CL:0000031!5.72e-07!33;CL:0000404!5.72e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002319,1.05e-08,43;CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0000393,4.28e-07,39;CL:0000211,4.28e-07,39;CL:0000540,5.63e-07,33;CL:0000047,5.63e-07,33;CL:0000031,5.63e-07,33;CL:0000404,5.63e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.45e-13!333;UBERON:0000922!3.06e-10!328;UBERON:0001017!3.82e-09!73;UBERON:0005743!3.82e-09!73;UBERON:0000073!3.16e-08!75;UBERON:0001016!3.16e-08!75;UBERON:0004121!4.60e-08!102;UBERON:0000924!4.60e-08!102;UBERON:0006601!4.60e-08!102;UBERON:0004111!7.26e-08!122;UBERON:0000479!2.94e-07!349;UBERON:0000025!8.00e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.42e-09,92;UBERON:0001017,3.73e-09,73;UBERON:0000922,1.11e-08,320;UBERON:0004121,2.22e-08,95;UBERON:0000924,2.22e-08,95;UBERON:0006601,2.22e-08,95;UBERON:0001016,3.32e-08,75;UBERON:0004111,7.71e-08,122;UBERON:0000479,1.58e-07,349;UBERON:0000025,8.47e-07,114
|phase1_expression=17.7765220286321,0.697950815278722,0,1.20985684522732,1.00179145989269,2.18243053485457,3.03696432774183,0,0,0.234064526321993,0,0,0.171200729931206,0,20.9859149943868,14.5782192520675,11.1929900500503,0.946386496074713,0.959801035240171,0.42438965179803,13.7770130044733,0,0,2.07990149631429,2.06468352960453,0,1.29228598847722,1.72376986148711,1.90023419456374,2.26827116783938,0.886922042621219,0,0.61506478758457,0,4.62162591602039,1.99481574430191,3.47087905646027,0,0,0,0,0,0.485510353031154,11.2048167998264,11.1514624341466,10.8292583775392,21.1245662973971,21.8025156380447,29.2182623036848,26.8313260722511,26.3174472655682,44.5632949531412,0,0,0,19.551717138732,48.4241513496499,21.6582278756526,16.9945827122062,13.7537654610729,10.1413024560989,9.14880236586657,10.6715375533337,0,1.97773272513395,0.7104801149461,24.2676089519908,46.8746332492297,114.991780050102,78.0334323557172,96.5391572602843,23.9946826899195,20.5407743085001,28.1728838194394,24.4405951096503,25.7381260250806,20.9220173898839,16.2162919368188,18.5863905240055,11.6059933202571,9.69769022185542,18.7528813400434,22.8930059181132,13.5063026407603,22.0029476798607,23.8649154233671,22.4947255662583,20.8767379324337,0.605809546665472,4.08086424576642,36.5229255764114,2.58127163094416,0.679971333707751,3.77792234146472,9.74664626171504,5.37632264516803,7.02222100658759,3.06774580640504,2.59786004602869,3.88673531961374,12.9575946194546,5.13305909657271,12.7402619853323,7.11066703153331,1.08245520505607,2.28023878927589,1.51657333504435,7.65031994117702,23.8222852955398,15.7348667408714,13.7053408145247,9.43842982767638,10.6083128737787,8.59119051149949,16.9327738275415,20.3579877954074,2.96633961281249,49.4529800666098,5.30766331169925,21.353224193058,10.1587098491781,11.6370060752453,5.59175283654366,44.7954619427667,55.5033773055656,4.59822699375465,0,0,0,16.926342252745,13.2675174817402,11.3088916901578,11.298580812498,12.5300574091862,14.3373750746096,12.3303359931496,27.4966282395854,12.9383249434497,8.08712826987759,32.6184876624035,8.45782879257574,8.73627996847197,11.1638520479317,13.7141384230501,11.4981683565744,11.5302348256365,11.7127155699661,13.4525752784288,16.1675994699632,37.2538977930604,49.9701192625615,35.9481001181223,44.2095126268701,35.521720985261,26.3401134602168,23.8841120182192,0,0,0,14.2916783049496,15.9477720787145,19.0865785148676,19.8865577891577,17.1184881620241,20.5175260140213,21.1605889722871,22.534965717568,27.9069168257535,30.9372517837343,34.47516745661,41.9936433447533,31.2867973090211,30.297915910165,25.633425983231,20.8187049078486,60.3021028542607,0.991256348951394,4.7601101999438,8.10495352033889,12.5407802804637,15.3352278973291,10.6892268050372,9.33987784148455,5.1360919050391,4.2707615539006,6.91735609840846,10.8074139784116,11.1415624343044,9.16331209459865,9.88701349519644,5.61958929674205,5.97423819763102,7.58671603812327,11.3106027483632,11.270773567308,9.57161240872977,8.33995694820791,10.5203729835478,11.6355228308633,8.85660887877613,8.79192875911699,5.18268088471562,5.92905254174298,4.33797274861845,3.73462090715086,2.69834534861824,4.26006254915856,2.894125917029,3.31013607315846,7.48009957372108,10.7009249671523,5.49122826376163,23.0029130443767,9.67566463938109,9.36113019343682,10.1031551178845,6.45830688678884,3.37710464954357,19.7685913478267,19.5176154123599,17.9261474086228,13.4098617762399,14.5507953938871,20.1007508930179,20.9478403979692,14.8301572371927,22.3841904630791,19.9318220683897,22.9614866866781,19.1720078217413,21.2402527695052,19.238324791341,0,0,14.7529281905711,13.7968373152366,22.4770825982909,14.8858841972098,9.83609672260053,17.6729649043061,21.1390507008892,22.2550084249084,20.6806461823487,23.1799734013975,20.7202766896627,28.3076530788832,19.8357243820698,22.2114452012597,33.5994611254545,10.9249247583414,33.9236803647762,20.1214132143998,27.5278961307544,34.1488154553148,17.2568679841952,8.25454162926937,8.76738315197778,7.35559811048003,6.79194353625777,8.30074899448604,8.26970538138308,13.0872142611902,13.5469003786194,13.5895805912401,6.32511651449993,7.21948802737308,18.7241783164583,12.6042765821917,7.76152102696527,17.1469628025274,23.2315706071378,19.6205699362278,20.404078554663,16.4411072521884,1.17335854031855,1.0591603543191,29.9918621354748,32.8123643353545,31.9699564857893,22.2554692984895,14.2053089363732,9.84845398470368,10.4933101186746,26.3303928854924,16.5744754373917,19.1939787205797,16.8527019906438,11.6788443342908,16.266613098802,8.92234875505438,0.849892149969277,0.279902904647316,0,1.90934123603023,13.6024477239888,22.1618219168265,19.548966688746,19.2361232333311,14.1935666435015,17.8020937227963,19.67152246263,14.1348208671376,5.96228877142247,23.6108938973032,1.12738587736838,21.081832992201,15.3876396125101,23.7230449779738,18.0823752868824,20.7816034353657,27.1095221271692,32.1604830564557,20.657290851865,4.59009829569411,8.3528701814781,6.63623353319174,15.2043911467623,16.5364641035372,9.74406172333463,11.8157619140538,8.74197961037565,5.88957702647847,3.83992770653901,4.74542314756294,3.81034033274999,2.62148081355785,2.53390489923356,2.50150788264857,2.33753804363138,18.8186218400625,0.665957860122194,0.62799699626633,0.839423081820392,23.375940877895,17.4544702169599,21.0624367907355,12.6477343656649,19.0597399533438,10.7302850097243,11.0478056761722,15.4681788628637,12.8889886757766,11.6464028361009,9.82012066606611,10.1253375034771,10.3573876741571,6.34399372577886,3.62432218226274,7.5764763736449,30.7249152518794,25.7807744688743,26.0124187263075,26.8304848163817,20.5904729464016,26.002867152789,22.6638562962784,25.994455976937,21.4792629999228,22.3061783903411,24.710050721576,22.6612448077115,26.8265388576402,26.0757029058484,30.0065025508336,21.3227159738534,22.1845603533261,24.3130681473951,27.2318002248635,17.8292011240416,18.1025322282524,21.9361294751535,20.4938447451583,21.4569387346954,22.8459441307527,24.8782043106971,22.8870648950923,22.1360705568755,16.8342681497322,25.6251639148216,24.7246250762664,19.6430900721451,22.930652495523,22.7629800957747,24.4814366379187,17.3109390249602,19.9830080264917,20.0852748672286,21.6179590737125,21.5637087126992
|short_description=p2@Nfia
}}

Revision as of 05:39, 14 September 2013

Short description:p2@Nfia
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nfia_5end
Coexpression cluster:MCL_coexpression_mm9:1809
Association with transcript: 0bp_to_ENSMUST00000075448, ENSMUST00000092532, ENSMUST00000097969, ENSMUST00000172094, NM_001122953, NM_010905, uc008ttt.2, uc008ttu.2, uc008ttv.2, uc008ttw.2_5end
EntrezGene:Nfia
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nfia

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.83
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C326.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C444.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E148.42
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C824.27
Mouse Microglia, donor2.CNhs12634.11736-123E846.87
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5114.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F578.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D996.54
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.49
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F94.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G336.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.65
accessory axillary lymph node, adult.CNhs10475.1063-29H923.82
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C513.71
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C116.93
adrenal gland, neonate N25.CNhs11223.1377-27I320.36
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H149.45
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F521.35
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B244.80
cerebellum, neonate N30.CNhs11135.1395-42I255.50
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.93
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F111.31
cortex, adult.CNhs10473.12-14D511.30
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F214.34
diencephalon, neonate N30.CNhs11201.1388-42B212.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.94
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G432.62
eyeball, embryo E12.CNhs11016.345-16C68.46
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C911.16
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C611.50
eyeball, neonate N01.CNhs11140.1532-43E711.53
eyeball, neonate N02.CNhs11205.1551-44G811.71
eyeball, neonate N16.CNhs11188.777-19A213.45
forelimb, embryo E11.CNhs10596.335-25E216.17
forelimb, embryo E12.CNhs10600.359-14H237.25
forelimb, embryo E13.CNhs10589.384-1E249.97
forelimb, embryo E14.CNhs10577.413-26A835.95
forelimb, embryo E15.CNhs11007.437-20E744.21
forelimb, embryo E17.CNhs10598.1517-43C435.52
forelimb, embryo E18.CNhs11008.1520-43B526.34
gonad, embryo E13.CNhs11044.1564-45I623.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E914.29
heart, embryo E12.CNhs11015.353-12F515.95
heart, embryo E13.CNhs11013.376-3I919.09
heart, embryo E14.CNhs10597.403-26D419.89
heart, embryo E15.CNhs11017.431-16C817.12
heart, embryo E16.CNhs11021.457-17C620.52
heart, embryo E17.CNhs11025.479-18E521.16
heart, embryo E18.CNhs11030.1283-20G322.53
heart, neonate N00.CNhs11213.639-21E327.91
heart, neonate N03.CNhs11221.1349-25I230.94
heart, neonate N10.CNhs11118.749-24G134.48
heart, neonate N16.CNhs11209.782-15G141.99
heart, neonate N20.CNhs11127.821-26I631.29
heart, neonate N25.CNhs11196.1351-25D330.30
heart, neonate N30.CNhs11202.1390-42D225.63
hippocampus, adult.CNhs10478.13-16E820.82
hippocampus, neonate N00.CNhs11228.627-43G160.30
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D815.34
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F211.14
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I29.57
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G710.52
kidney, neonate N10.CNhs11206.758-6D511.64
kidney, neonate N20.CNhs11113.832-19I18.86
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H15.18
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F410.70
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G219.52
lung, embryo E14.CNhs10604.404-26F817.93
lung, embryo E15.CNhs11020.432-17C513.41
lung, embryo E16.CNhs10998.458-17B614.55
lung, embryo E17.CNhs10605.480-44A620.10
lung, embryo E18.CNhs10583.1287-20I620.95
lung, neonate N00.CNhs11224.640-42C614.83
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A319.93
lung, neonate N10.CNhs11219.750-23E622.96
lung, neonate N20.CNhs11109.822-18A419.17
lung, neonate N25.CNhs11119.1359-25C721.24
lung, neonate N30.CNhs11133.1394-42H219.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H213.80
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.67
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.18
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.31
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.60
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I733.92
ovary, embryo E18.CNhs11040.505-44H720.12
ovary, neonate N00.CNhs11217.1299-22I427.53
oviduct, adult pregnant day01.CNhs10500.988-6G634.15
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D813.55
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E612.60
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B923.23
pituitary gland, embryo E16.CNhs11036.449-43F619.62
pituitary gland, embryo E17.CNhs11039.1265-44F520.40
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F829.99
skin, adult.CNhs10492.30-1C332.81
skin, neonate N00.CNhs11124.650-25G431.97
skin, neonate N03.CNhs11215.662-22H322.26
skin, neonate N06.CNhs11097.693-20I514.21
skin, neonate N10.CNhs11108.762-6C49.85
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C926.33
spleen, adult.CNhs10465.25-2G216.57
spleen, embryo E16.CNhs11035.461-43C119.19
spleen, embryo E18.CNhs11011.1271-21F216.85
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H116.27
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G822.16
stomach, embryo E16.CNhs11022.459-17D419.55
stomach, embryo E17.CNhs11006.1035-18D519.24
stomach, embryo E18.CNhs10999.1286-20C614.19
stomach, neonate N03.CNhs11193.1340-24B817.80
stomach, neonate N07.CNhs11210.718-18A919.67
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F521.08
testis, embryo E15.CNhs11034.443-27C515.39
testis, embryo E16.CNhs11033.470-26G523.72
testis, embryo E17.CNhs11029.486-18I518.08
testis, embryo E18.CNhs11027.503-18G520.78
testis, neonate N00.CNhs11189.1300-22B727.11
testis, neonate N07.CNhs11222.726-26I432.16
testis, neonate N10.CNhs11204.763-44D920.66
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I415.20
thymus, embryo E15.CNhs11005.430-45I216.54
thymus, embryo E16.CNhs11002.456-26C59.74
thymus, embryo E17.CNhs10581.478-18C111.82
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D33.81
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B418.82
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E423.38
uterus, adult pregnant day19.CNhs10497.590-15F517.45
uterus, adult.CNhs10509.92-27E521.06
vagina, adult.CNhs10502.89-27D512.65
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I87.58
whole body, embryo E12.CNhs10587.857-27C930.72
whole body, embryo E13.CNhs10512.372-23H225.78
whole body, embryo E14.5.CNhs10578.420-27D226.01
whole body, embryo E14.CNhs10519.395-14B126.83
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G527.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.93
whole body, embryo E17.5.CNhs10513.490-9F922.76
whole body, embryo E17.CNhs10517.475-3I524.48
whole body, embryo E18.CNhs10516.493-3B317.31
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C620.09
whole body, neonate N06.CNhs10515.692-21D121.62
whole body, neonate N10.CNhs10518.761-6B421.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.05e-0843
ectodermal cell1.47e-0844
neurectodermal cell1.47e-0844
electrically responsive cell4.28e-0739
electrically active cell4.28e-0739
neuron5.63e-0733
neuronal stem cell5.63e-0733
neuroblast5.63e-0733
electrically signaling cell5.63e-0733

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.42e-0992
central nervous system3.73e-0973
embryo1.11e-08320
ectoderm-derived structure2.22e-0895
ectoderm2.22e-0895
presumptive ectoderm2.22e-0895
nervous system3.32e-0875
anatomical conduit7.71e-08122
tissue1.58e-07349
tube8.47e-07114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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