FFCP PHASE1:Mm9::chr4:83063619..83063662,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77634|HGNC=|MCL_coexpression_id=585|UniProt=Q9D2C9,Q9CQB0,E0CY59|association_with_transcript=0bp_to_ENSMUST00000030206,ENSMUST00000071544,ENSMUST00000123262,ENSMUST00000124856,ENSMUST00000137512,ENSMUST00000143533,NM_029949,uc008tkt.1,uc008tku.1,uc008tkv.1,uc012dgp.1_5end|description=CAGE_peak_1_at_Snapc3_5end|id=chr4:83063619..83063662,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.87e-12!94;UBERON:0007811!1.44e-10!86;UBERON:0001004!1.83e-07!42;UBERON:0000065!1.90e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.25e-08,43;UBERON:0001004,1.83e-07,42;UBERON:0000065,1.90e-07,41;UBERON:0007811,3.05e-07,36|phase1_expression=31.2290251854348,22.6834014965585,23.2049612088663,22.9872800593191,26.5474736871564,27.8679591373737,22.1932008565749,45.9679031452011,29.987997818305,32.3009046324351,33.216285835748,29.7550153052605,52.9010255487426,48.2560621352866,21.3190247562024,32.598518049762,18.1886088313318,55.5213411030498,60.878808520948,50.0779789121676,28.9997619415148,24.3262830442169,32.6499736423669,22.7189240366637,16.2880589557691,10.9104073181854,15.0766698655676,19.1769397090441,14.4417798786844,20.4144405105544,20.399206980288,22.2260735710871,15.9916844771988,0,25.4189425381122,17.4546377626417,25.1128308202714,32.2269355667419,18.7520482685712,25.6526634547161,34.1174263057988,32.1031377930469,33.9857247121808,22.5355304176283,25.4456097360982,35.7916166715279,17.9950009200049,14.6076854774899,11.4236815021925,17.3042610176112,11.6188729949051,14.3752564364972,25.1673909086605,40.6202799526353,36.2981303073861,27.0122407837744,28.3668105539369,33.5186859980338,43.2957226239539,26.4495489636016,36.7622214033584,11.5207140903505,12.450127145556,7.64914759689189,2.96659908770092,4.2628806896766,7.49000276296012,5.76327457982332,59.9325959143001,45.6320071561114,46.4818164586554,16.8534080798244,17.4486147351775,58.1831296271032,46.6767443858811,50.5570332635512,27.5289702498472,31.283397830871,31.0285197177612,37.4557057153751,37.6014215205904,39.068502791757,24.8472869111229,36.5795696520592,32.5460267764606,28.8736013764194,30.8946547334053,38.9574841774878,35.8184894465961,31.8156268049567,38.8418414860248,19.7897491705719,8.83962733820076,12.9528765993076,18.1937396885347,14.7848872742121,23.0328849016073,19.0881961287425,19.4839503452152,17.666978725517,33.3798904870733,37.2146784501522,66.2493623237279,49.7746692207332,23.1645413881999,25.0826266820348,19.2099289105618,18.0410529956115,90.8871971601573,29.3915435348353,26.0227990149204,20.0947215686013,22.3697032338377,25.7735715344985,31.1610073909618,19.1013218821107,26.6970565153124,36.4390379438177,24.7690954545965,30.5739346400603,35.1138014352026,29.0925151881133,20.5030937339934,62.3623097634595,59.6923114418347,21.4583926375217,21.087461913042,26.3957201637099,19.4417447421789,39.0953568846587,43.4625572677695,47.4973450986627,38.5889990826854,43.9830586608169,38.8563643326377,37.3154905055843,32.8941145236522,29.6088590052021,24.5141075680664,33.4602550859494,41.1180599762144,35.8647282916218,38.8934200379554,43.4029875366859,44.2237244483631,46.3771667431156,43.0090915729155,43.9795730256327,38.3711027420459,47.8438382824583,40.6447096818722,30.2490110750053,43.6534181284189,40.3972513165713,41.7737736908125,33.8358253591438,18.2575428701441,21.3598762905214,18.4706274607135,34.5900040134288,30.9574399175047,28.0896815879183,35.985199808952,43.0913667526814,35.1729017383222,42.0886439998238,30.8514411609562,33.1613572322761,31.4309313334748,37.5943492741128,40.5344047729279,39.3277966174144,31.6152166019113,35.6989073902589,48.9975580154416,46.1012663459194,28.0855965536228,27.7673094996721,34.1261200856374,37.8545775132515,38.7891058579501,28.235693447268,26.2406091736947,29.8654232996718,27.5226855695817,16.3051965176771,25.6361912976275,32.2309484706664,31.7791462004166,32.357498711552,22.6944952368429,22.9012464242522,23.329151817229,33.9318082450895,54.0997131230786,29.5294425375706,32.0021603826582,33.8054651871335,42.3684798732524,30.5553006317776,29.5157608341785,21.7179008502369,26.9771890649305,19.520877368783,19.2627815210939,20.012728002252,18.0545508035768,20.5000585789554,17.0599320693551,20.4264257590076,15.2407113168533,14.5517548989683,14.3768206527355,20.8398930694362,20.9065240986756,18.185679212192,16.5045620440159,16.8855232477179,38.0591571743206,36.761333883474,38.7856643932022,37.5136639563166,40.1320324573339,45.8967145390575,42.1337244368244,39.6121305151332,51.0737866904059,47.6149082744866,48.3147949032186,45.3901381762594,43.8619853939375,41.5142798128938,19.6028669121054,11.4220193601929,25.5717421969899,31.1808523324348,34.5183768473753,25.7865710502847,16.0656246469142,23.4797962300067,36.5989534522858,37.0916807081807,36.8374010123086,32.9776941174522,36.5389825495126,41.0460969643807,39.6714487641396,36.531982238914,47.8298211315293,46.2702695647402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| ||
|EntrezGene=77634 | |||
|HGNC= | |||
|MCL_coexpression_id=585 | |||
|UniProt=Q9D2C9,Q9CQB0,E0CY59 | |||
|association_with_transcript=0bp_to_ENSMUST00000030206,ENSMUST00000071544,ENSMUST00000123262,ENSMUST00000124856,ENSMUST00000137512,ENSMUST00000143533,NM_029949,uc008tkt.1,uc008tku.1,uc008tkv.1,uc012dgp.1_5end | |||
|description=CAGE_peak_1_at_Snapc3_5end | |||
|id=chr4:83063619..83063662,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.87e-12!94;UBERON:0007811!1.44e-10!86;UBERON:0001004!1.83e-07!42;UBERON:0000065!1.90e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.25e-08,43;UBERON:0001004,1.83e-07,42;UBERON:0000065,1.90e-07,41;UBERON:0007811,3.05e-07,36 | |||
|phase1_expression=31.2290251854348,22.6834014965585,23.2049612088663,22.9872800593191,26.5474736871564,27.8679591373737,22.1932008565749,45.9679031452011,29.987997818305,32.3009046324351,33.216285835748,29.7550153052605,52.9010255487426,48.2560621352866,21.3190247562024,32.598518049762,18.1886088313318,55.5213411030498,60.878808520948,50.0779789121676,28.9997619415148,24.3262830442169,32.6499736423669,22.7189240366637,16.2880589557691,10.9104073181854,15.0766698655676,19.1769397090441,14.4417798786844,20.4144405105544,20.399206980288,22.2260735710871,15.9916844771988,0,25.4189425381122,17.4546377626417,25.1128308202714,32.2269355667419,18.7520482685712,25.6526634547161,34.1174263057988,32.1031377930469,33.9857247121808,22.5355304176283,25.4456097360982,35.7916166715279,17.9950009200049,14.6076854774899,11.4236815021925,17.3042610176112,11.6188729949051,14.3752564364972,25.1673909086605,40.6202799526353,36.2981303073861,27.0122407837744,28.3668105539369,33.5186859980338,43.2957226239539,26.4495489636016,36.7622214033584,11.5207140903505,12.450127145556,7.64914759689189,2.96659908770092,4.2628806896766,7.49000276296012,5.76327457982332,59.9325959143001,45.6320071561114,46.4818164586554,16.8534080798244,17.4486147351775,58.1831296271032,46.6767443858811,50.5570332635512,27.5289702498472,31.283397830871,31.0285197177612,37.4557057153751,37.6014215205904,39.068502791757,24.8472869111229,36.5795696520592,32.5460267764606,28.8736013764194,30.8946547334053,38.9574841774878,35.8184894465961,31.8156268049567,38.8418414860248,19.7897491705719,8.83962733820076,12.9528765993076,18.1937396885347,14.7848872742121,23.0328849016073,19.0881961287425,19.4839503452152,17.666978725517,33.3798904870733,37.2146784501522,66.2493623237279,49.7746692207332,23.1645413881999,25.0826266820348,19.2099289105618,18.0410529956115,90.8871971601573,29.3915435348353,26.0227990149204,20.0947215686013,22.3697032338377,25.7735715344985,31.1610073909618,19.1013218821107,26.6970565153124,36.4390379438177,24.7690954545965,30.5739346400603,35.1138014352026,29.0925151881133,20.5030937339934,62.3623097634595,59.6923114418347,21.4583926375217,21.087461913042,26.3957201637099,19.4417447421789,39.0953568846587,43.4625572677695,47.4973450986627,38.5889990826854,43.9830586608169,38.8563643326377,37.3154905055843,32.8941145236522,29.6088590052021,24.5141075680664,33.4602550859494,41.1180599762144,35.8647282916218,38.8934200379554,43.4029875366859,44.2237244483631,46.3771667431156,43.0090915729155,43.9795730256327,38.3711027420459,47.8438382824583,40.6447096818722,30.2490110750053,43.6534181284189,40.3972513165713,41.7737736908125,33.8358253591438,18.2575428701441,21.3598762905214,18.4706274607135,34.5900040134288,30.9574399175047,28.0896815879183,35.985199808952,43.0913667526814,35.1729017383222,42.0886439998238,30.8514411609562,33.1613572322761,31.4309313334748,37.5943492741128,40.5344047729279,39.3277966174144,31.6152166019113,35.6989073902589,48.9975580154416,46.1012663459194,28.0855965536228,27.7673094996721,34.1261200856374,37.8545775132515,38.7891058579501,28.235693447268,26.2406091736947,29.8654232996718,27.5226855695817,16.3051965176771,25.6361912976275,32.2309484706664,31.7791462004166,32.357498711552,22.6944952368429,22.9012464242522,23.329151817229,33.9318082450895,54.0997131230786,29.5294425375706,32.0021603826582,33.8054651871335,42.3684798732524,30.5553006317776,29.5157608341785,21.7179008502369,26.9771890649305,19.520877368783,19.2627815210939,20.012728002252,18.0545508035768,20.5000585789554,17.0599320693551,20.4264257590076,15.2407113168533,14.5517548989683,14.3768206527355,20.8398930694362,20.9065240986756,18.185679212192,16.5045620440159,16.8855232477179,38.0591571743206,36.761333883474,38.7856643932022,37.5136639563166,40.1320324573339,45.8967145390575,42.1337244368244,39.6121305151332,51.0737866904059,47.6149082744866,48.3147949032186,45.3901381762594,43.8619853939375,41.5142798128938,19.6028669121054,11.4220193601929,25.5717421969899,31.1808523324348,34.5183768473753,25.7865710502847,16.0656246469142,23.4797962300067,36.5989534522858,37.0916807081807,36.8374010123086,32.9776941174522,36.5389825495126,41.0460969643807,39.6714487641396,36.531982238914,47.8298211315293,46.2702695647402,41.730385051231,21.5459380437379,34.6949223423117,51.9655887363487,27.8764790513922,25.0064055239631,19.0463840887793,23.5756349694873,17.4228116799656,29.2063390546731,34.8878195777099,44.7146487257332,32.0847640546249,28.4433082142234,25.3004660579997,20.6271086496374,46.2997863825152,41.0539294391387,21.60290019172,31.5075441496441,46.6404814479179,25.6851097346982,38.9981178827027,17.6589670486468,26.2832313031356,22.6660315824288,26.2428793685405,64.6354111530602,44.402717341374,41.1334148010023,37.602288360988,49.7346926227536,24.4843902769075,32.4494278518392,28.1936953316457,27.4494534391086,29.0755407970447,26.183215523652,30.2094243263466,31.3426097292936,26.3466566490476,26.590775941495,30.8185941583865,14.3200592702267,34.006119309972,36.597504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| |||
|short_description=p1@Snapc3 | |||
}} |
Revision as of 05:30, 14 September 2013
Short description: | p1@Snapc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snapc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:585 |
Association with transcript: | 0bp_to_ENSMUST00000030206, ENSMUST00000071544, ENSMUST00000123262, ENSMUST00000124856, ENSMUST00000137512, ENSMUST00000143533, NM_029949, uc008tkt.1, uc008tku.1, uc008tkv.1, uc012dgp.1_5end |
EntrezGene: | Snapc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 2.25e-08 | 43 |
respiratory system | 1.83e-07 | 42 |
respiratory tract | 1.90e-07 | 41 |
craniocervical region | 3.05e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.