FFCP PHASE1:Mm9::chr4:77857853..77857903,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19266|HGNC=|MCL_coexpression_id=2|UniProt=Q8BNN7|association_with_transcript=0bp_to_ENSMUST00000105150,ENSMUST00000140422_5end|description=CAGE_peak_3_at_Ptprd_5end|id=chr4:77857853..77857903,-|ontology_enrichment_celltype=CL:0000117!2.16e-16!23;CL:0000337!2.16e-16!23;CL:0000540!1.33e-15!33;CL:0000047!1.33e-15!33;CL:0000031!1.33e-15!33;CL:0000404!1.33e-15!33;CL:0000393!7.09e-12!39;CL:0000211!7.09e-12!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!2.16e-09!43;CL:0000055!5.97e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-21,23;CL:0000337,1.08e-21,23;CL:0000540,1.73e-13,33;CL:0000047,1.73e-13,33;CL:0000031,1.73e-13,33;CL:0000404,1.73e-13,33;CL:0000393,3.74e-10,39;CL:0000211,3.74e-10,39;CL:0000221,7.97e-09,44;CL:0000133,7.97e-09,44;CL:0002319,1.73e-08,43;CL:0002609,5.86e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.17e-26!73;UBERON:0005743!2.17e-26!73;UBERON:0002346!2.69e-26!71;UBERON:0003075!2.69e-26!71;UBERON:0007284!2.69e-26!71;UBERON:0000073!1.39e-25!75;UBERON:0001016!1.39e-25!75;UBERON:0003056!2.25e-24!49;UBERON:0001049!2.70e-24!52;UBERON:0005068!2.70e-24!52;UBERON:0006241!2.70e-24!52;UBERON:0007135!2.70e-24!52;UBERON:0000033!7.67e-24!63;UBERON:0004121!1.04e-23!102;UBERON:0000924!1.04e-23!102;UBERON:0006601!1.04e-23!102;UBERON:0000955!7.62e-23!50;UBERON:0006238!7.62e-23!50;UBERON:0002616!2.62e-22!49;UBERON:0003080!2.77e-22!40;UBERON:0002020!5.08e-22!34;UBERON:0002780!1.39e-21!39;UBERON:0001890!1.39e-21!39;UBERON:0006240!1.39e-21!39;UBERON:0002791!1.63e-18!29;UBERON:0003528!1.63e-18!29;UBERON:0001893!1.63e-18!29;UBERON:0000956!2.66e-13!21;UBERON:0001869!2.66e-13!21;UBERON:0000203!2.66e-13!21;UBERON:0007811!1.13e-11!86;UBERON:0000153!8.91e-11!94;UBERON:0002619!2.15e-10!17;UBERON:0002021!1.16e-09!10;UBERON:0000411!1.16e-09!10;UBERON:0001950!1.16e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.67e-33,54;UBERON:0002346,5.99e-31,64;UBERON:0003075,5.99e-31,64;UBERON:0007284,5.99e-31,64;UBERON:0001049,1.20e-30,52;UBERON:0005068,1.20e-30,52;UBERON:0006241,1.20e-30,52;UBERON:0007135,1.20e-30,52;UBERON:0002020,5.10e-30,34;UBERON:0003056,5.77e-29,49;UBERON:0003080,5.88e-28,40;UBERON:0001017,1.21e-27,73;UBERON:0002780,5.14e-27,39;UBERON:0001890,5.14e-27,39;UBERON:0006240,5.14e-27,39;UBERON:0001016,2.05e-26,75;UBERON:0000955,4.50e-26,47;UBERON:0006238,4.50e-26,47;UBERON:0010371,5.77e-26,73;UBERON:0002616,2.29e-25,46;UBERON:0003528,3.11e-25,29;UBERON:0002791,3.11e-25,29;UBERON:0001893,3.11e-25,29;UBERON:0004121,5.76e-24,95;UBERON:0000924,5.76e-24,95;UBERON:0006601,5.76e-24,95;UBERON:0000956,3.94e-18,21;UBERON:0001869,3.94e-18,21;UBERON:0000203,3.94e-18,21;UBERON:0010314,9.56e-18,92;UBERON:0002619,3.69e-14,17;UBERON:0002021,1.50e-12,10;UBERON:0000411,1.50e-12,10;UBERON:0001950,1.50e-12,10;UBERON:0002420,3.59e-08,8;UBERON:0007245,3.59e-08,8;UBERON:0010009,3.59e-08,8;UBERON:0010011,3.59e-08,8;UBERON:0000454,3.59e-08,8|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,21.4455448511174,19.5726662330652,18.3811107016792,0,0,0,0.988866362566974,0.7104801149461,0,0,24.4707485048007,20.3858966880853,19.5602214056785,13.139945282575,10.3808214247258,17.3936934885235,12.172374819316,18.3843757322004,12.1127469099328,15.1947932321373,11.6740965274745,20.1786020227197,17.7486028588675,21.3574481928272,6.14202597803038,16.3201156909187,13.2934475565825,27.6950870345248,28.7590795214188,13.7935589910722,0.151452386666368,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.5709193985953,0,1.63286352971307,0.173485326766136,0.304465478312141,0,0.452167921657868,0.705532242814229,0.628332956648377,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,15.7280171375064,11.8950156732843,25.6334878310243,32.3313235557634,39.3801804288709,7.2725815595846,15.412919991437,0,0,0,0.420883711772948,0.260240885925407,1.83921683546778,1.62055916824814,2.26057226753573,3.33378845841506,2.94661556655154,2.52994656311268,2.84573707812917,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0.696504333044333,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,16.4026159880019,14.5095503454791,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0.500535317148282,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33486592967038,6.91548950893999,0,0,0,0.390438744296638,1.29254038639679,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,7.06906896127976,0,0,0,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,7.83011093233712,0.540183282093931,0.646793418913773,1.71469628025274,2.12808280370728,1.96205699362278,2.46823530903181,1.522324745573,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.387479470433193,0,0.234714477291508,0.911430693907651,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,58.7341916321749,53.8580526713397,52.1334917229851,46.9159187798267,53.4364365421101,61.9422995859554,49.2766425169218,53.5882231836822,60.2679403948992,60.0601961632111,0.415149390336707,7.18244772121856,2.90247129782028,3.16038732188782,1.46729213839588,2.20612210140017,7.55638874525492,9.06554251851134,8.98573786857083,5.30664144703975,6.33698249725599,5.65879024158229,6.74218853783153,6.6586158501064,7.46661096422972,6.19181798667996,7.18482820858104,6.36600427530227,7.82963211526283,5.5935589651071,6.17164654293748,7.27650805253284,6.91464950847231,5.52316383202848,6.30532848782715,6.76916863133412,7.68297486065645,7.3659519202596,6.3827933507555,6.17256498823512,6.64356101495375,6.79680928391388,4.50154147486658,7.2820315357404,4.82266527452853,11.4912865851455,4.21076895201735,5.15690529715916,1.53030665655075,0.882365676478062,0.695603506861264|short_description=p3@Ptprd}} | ||
|EntrezGene=19266 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q8BNN7 | |||
|association_with_transcript=0bp_to_ENSMUST00000105150,ENSMUST00000140422_5end | |||
|description=CAGE_peak_3_at_Ptprd_5end | |||
|id=chr4:77857853..77857903,- | |||
|ontology_enrichment_celltype=CL:0000117!2.16e-16!23;CL:0000337!2.16e-16!23;CL:0000540!1.33e-15!33;CL:0000047!1.33e-15!33;CL:0000031!1.33e-15!33;CL:0000404!1.33e-15!33;CL:0000393!7.09e-12!39;CL:0000211!7.09e-12!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!2.16e-09!43;CL:0000055!5.97e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-21,23;CL:0000337,1.08e-21,23;CL:0000540,1.73e-13,33;CL:0000047,1.73e-13,33;CL:0000031,1.73e-13,33;CL:0000404,1.73e-13,33;CL:0000393,3.74e-10,39;CL:0000211,3.74e-10,39;CL:0000221,7.97e-09,44;CL:0000133,7.97e-09,44;CL:0002319,1.73e-08,43;CL:0002609,5.86e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.17e-26!73;UBERON:0005743!2.17e-26!73;UBERON:0002346!2.69e-26!71;UBERON:0003075!2.69e-26!71;UBERON:0007284!2.69e-26!71;UBERON:0000073!1.39e-25!75;UBERON:0001016!1.39e-25!75;UBERON:0003056!2.25e-24!49;UBERON:0001049!2.70e-24!52;UBERON:0005068!2.70e-24!52;UBERON:0006241!2.70e-24!52;UBERON:0007135!2.70e-24!52;UBERON:0000033!7.67e-24!63;UBERON:0004121!1.04e-23!102;UBERON:0000924!1.04e-23!102;UBERON:0006601!1.04e-23!102;UBERON:0000955!7.62e-23!50;UBERON:0006238!7.62e-23!50;UBERON:0002616!2.62e-22!49;UBERON:0003080!2.77e-22!40;UBERON:0002020!5.08e-22!34;UBERON:0002780!1.39e-21!39;UBERON:0001890!1.39e-21!39;UBERON:0006240!1.39e-21!39;UBERON:0002791!1.63e-18!29;UBERON:0003528!1.63e-18!29;UBERON:0001893!1.63e-18!29;UBERON:0000956!2.66e-13!21;UBERON:0001869!2.66e-13!21;UBERON:0000203!2.66e-13!21;UBERON:0007811!1.13e-11!86;UBERON:0000153!8.91e-11!94;UBERON:0002619!2.15e-10!17;UBERON:0002021!1.16e-09!10;UBERON:0000411!1.16e-09!10;UBERON:0001950!1.16e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.67e-33,54;UBERON:0002346,5.99e-31,64;UBERON:0003075,5.99e-31,64;UBERON:0007284,5.99e-31,64;UBERON:0001049,1.20e-30,52;UBERON:0005068,1.20e-30,52;UBERON:0006241,1.20e-30,52;UBERON:0007135,1.20e-30,52;UBERON:0002020,5.10e-30,34;UBERON:0003056,5.77e-29,49;UBERON:0003080,5.88e-28,40;UBERON:0001017,1.21e-27,73;UBERON:0002780,5.14e-27,39;UBERON:0001890,5.14e-27,39;UBERON:0006240,5.14e-27,39;UBERON:0001016,2.05e-26,75;UBERON:0000955,4.50e-26,47;UBERON:0006238,4.50e-26,47;UBERON:0010371,5.77e-26,73;UBERON:0002616,2.29e-25,46;UBERON:0003528,3.11e-25,29;UBERON:0002791,3.11e-25,29;UBERON:0001893,3.11e-25,29;UBERON:0004121,5.76e-24,95;UBERON:0000924,5.76e-24,95;UBERON:0006601,5.76e-24,95;UBERON:0000956,3.94e-18,21;UBERON:0001869,3.94e-18,21;UBERON:0000203,3.94e-18,21;UBERON:0010314,9.56e-18,92;UBERON:0002619,3.69e-14,17;UBERON:0002021,1.50e-12,10;UBERON:0000411,1.50e-12,10;UBERON:0001950,1.50e-12,10;UBERON:0002420,3.59e-08,8;UBERON:0007245,3.59e-08,8;UBERON:0010009,3.59e-08,8;UBERON:0010011,3.59e-08,8;UBERON:0000454,3.59e-08,8 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,21.4455448511174,19.5726662330652,18.3811107016792,0,0,0,0.988866362566974,0.7104801149461,0,0,24.4707485048007,20.3858966880853,19.5602214056785,13.139945282575,10.3808214247258,17.3936934885235,12.172374819316,18.3843757322004,12.1127469099328,15.1947932321373,11.6740965274745,20.1786020227197,17.7486028588675,21.3574481928272,6.14202597803038,16.3201156909187,13.2934475565825,27.6950870345248,28.7590795214188,13.7935589910722,0.151452386666368,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.5709193985953,0,1.63286352971307,0.173485326766136,0.304465478312141,0,0.452167921657868,0.705532242814229,0.628332956648377,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,15.7280171375064,11.8950156732843,25.6334878310243,32.3313235557634,39.3801804288709,7.2725815595846,15.412919991437,0,0,0,0.420883711772948,0.260240885925407,1.83921683546778,1.62055916824814,2.26057226753573,3.33378845841506,2.94661556655154,2.52994656311268,2.84573707812917,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0.696504333044333,0,0,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,16.4026159880019,14.5095503454791,0,0,0.426576501070468,0.928946687441754,0.128867461322093,0,0,0.380451252225118,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.610953983535943,0,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0.500535317148282,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33486592967038,6.91548950893999,0,0,0,0.390438744296638,1.29254038639679,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.584511715822624,0.790575555893047,7.06906896127976,0,0,0,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,7.83011093233712,0.540183282093931,0.646793418913773,1.71469628025274,2.12808280370728,1.96205699362278,2.46823530903181,1.522324745573,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.655087691238533,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.387479470433193,0,0.234714477291508,0.911430693907651,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,58.7341916321749,53.8580526713397,52.1334917229851,46.9159187798267,53.4364365421101,61.9422995859554,49.2766425169218,53.5882231836822,60.2679403948992,60.0601961632111,0.415149390336707,7.18244772121856,2.90247129782028,3.16038732188782,1.46729213839588,2.20612210140017,7.55638874525492,9.06554251851134,8.98573786857083,5.30664144703975,6.33698249725599,5.65879024158229,6.74218853783153,6.6586158501064,7.46661096422972,6.19181798667996,7.18482820858104,6.36600427530227,7.82963211526283,5.5935589651071,6.17164654293748,7.27650805253284,6.91464950847231,5.52316383202848,6.30532848782715,6.76916863133412,7.68297486065645,7.3659519202596,6.3827933507555,6.17256498823512,6.64356101495375,6.79680928391388,4.50154147486658,7.2820315357404,4.82266527452853,11.4912865851455,4.21076895201735,5.15690529715916,1.53030665655075,0.882365676478062,0.695603506861264 | |||
|short_description=p3@Ptprd | |||
}} |
Revision as of 05:28, 14 September 2013
Short description: | p3@Ptprd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptprd_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000105150, ENSMUST00000140422_5end |
EntrezGene: | Ptprd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-21 | 23 |
neuron | 1.73e-13 | 33 |
neuronal stem cell | 1.73e-13 | 33 |
neuroblast | 1.73e-13 | 33 |
electrically signaling cell | 1.73e-13 | 33 |
electrically responsive cell | 3.74e-10 | 39 |
electrically active cell | 3.74e-10 | 39 |
ectodermal cell | 7.97e-09 | 44 |
neurectodermal cell | 7.97e-09 | 44 |
neural cell | 1.73e-08 | 43 |
neuron of cerebral cortex | 5.86e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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