FFCP PHASE1:Hg19::chr8:48572027..48572044,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3574|description=CAGE_peak_at_chr8:48572027..48572044,-|id=chr8:48572027..48572044,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;3.82e-07;13|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0001049!3.50e-20!57;UBERON:0005068!3.50e-20!57;UBERON:0006241!3.50e-20!57;UBERON:0007135!3.50e-20!57;UBERON:0003075!2.76e-16!86;UBERON:0007284!2.76e-16!86;UBERON:0002616!5.97e-16!59;UBERON:0002346!3.69e-15!90;UBERON:0002020!9.31e-13!34;UBERON:0003528!9.31e-13!34;UBERON:0001017!1.66e-12!82;UBERON:0003080!2.14e-12!42;UBERON:0000955!2.39e-12!69;UBERON:0006238!2.39e-12!69;UBERON:0002298!2.84e-12!8;UBERON:0005743!1.40e-11!86;UBERON:0002780!3.49e-11!41;UBERON:0001890!3.49e-11!41;UBERON:0006240!3.49e-11!41;UBERON:0002791!6.18e-10!33;UBERON:0000073!8.57e-10!94;UBERON:0001016!8.57e-10!94;UBERON:0003076!1.25e-09!15;UBERON:0003057!1.25e-09!15;UBERON:0001893!1.53e-09!34;UBERON:0000477!3.90e-09!286;UBERON:0003056!6.85e-09!61;UBERON:0001869!9.49e-09!32;UBERON:0002308!3.87e-08!9;UBERON:0000125!3.87e-08!9;UBERON:0000033!8.76e-08!123;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0000475!1.40e-07!365;UBERON:0006331!1.83e-07!3;UBERON:0004733!2.18e-07!12;UBERON:0002028!2.18e-07!12;UBERON:0007277!2.18e-07!12;UBERON:0004111!2.52e-07!241;UBERON:0000956!3.95e-07!25;UBERON:0000203!3.95e-07!25;UBERON:0000025!5.95e-07!194;UBERON:0005174!6.31e-07!5;UBERON:0001137!6.31e-07!5;UBERON:0002619!7.42e-07!22;UBERON:0000988!9.12e-07!3;UBERON:0002771!9.31e-07!3;UBERON:0004732!9.90e-07!13|ontology_enrichment_uberon_v019=UBERON:0002038;5.71e-21;1!UBERON:0009661;5.71e-21;1!UBERON:0002950;5.71e-21;1!UBERON:0001891;5.71e-21;1!UBERON:0001954;3.52e-11;2!UBERON:0002148;3.52e-11;2!UBERON:0006331;3.52e-11;2!UBERON:0009662;3.52e-11;2!UBERON:0003022;3.52e-11;2!UBERON:0002421;3.52e-11;2!UBERON:0002600;3.52e-11;2!UBERON:0000125;1.01e-09;9!UBERON:0002308;1.01e-09;9!UBERON:0000988;7.02e-08;3!UBERON:0003528;4.31e-07;34!UBERON:0002020;4.31e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.45e-21,1;UBERON:0009661,3.45e-21,1;UBERON:0002950,3.45e-21,1;UBERON:0001891,3.45e-21,1;UBERON:0009616,3.45e-21,1;UBERON:0010286,3.45e-21,1;UBERON:0001954,3.02e-11,2;UBERON:0003022,3.02e-11,2;UBERON:0002421,3.02e-11,2;UBERON:0002600,3.02e-11,2;UBERON:0002148,3.70e-11,2;UBERON:0006331,3.70e-11,2;UBERON:0009662,3.70e-11,2;UBERON:0000125,9.24e-10,9;UBERON:0002308,9.24e-10,9;UBERON:0003528,2.18e-09,34;UBERON:0002020,2.18e-09,34;UBERON:0000988,7.26e-08,3|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.308097234229289,0,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60042028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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3574 | |||
|description=CAGE_peak_at_chr8:48572027..48572044,- | |||
|id=chr8:48572027..48572044,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0001049!3.50e-20!57;UBERON:0005068!3.50e-20!57;UBERON:0006241!3.50e-20!57;UBERON:0007135!3.50e-20!57;UBERON:0003075!2.76e-16!86;UBERON:0007284!2.76e-16!86;UBERON:0002616!5.97e-16!59;UBERON:0002346!3.69e-15!90;UBERON:0002020!9.31e-13!34;UBERON:0003528!9.31e-13!34;UBERON:0001017!1.66e-12!82;UBERON:0003080!2.14e-12!42;UBERON:0000955!2.39e-12!69;UBERON:0006238!2.39e-12!69;UBERON:0002298!2.84e-12!8;UBERON:0005743!1.40e-11!86;UBERON:0002780!3.49e-11!41;UBERON:0001890!3.49e-11!41;UBERON:0006240!3.49e-11!41;UBERON:0002791!6.18e-10!33;UBERON:0000073!8.57e-10!94;UBERON:0001016!8.57e-10!94;UBERON:0003076!1.25e-09!15;UBERON:0003057!1.25e-09!15;UBERON:0001893!1.53e-09!34;UBERON:0000477!3.90e-09!286;UBERON:0003056!6.85e-09!61;UBERON:0001869!9.49e-09!32;UBERON:0002308!3.87e-08!9;UBERON:0000125!3.87e-08!9;UBERON:0000033!8.76e-08!123;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0000475!1.40e-07!365;UBERON:0006331!1.83e-07!3;UBERON:0004733!2.18e-07!12;UBERON:0002028!2.18e-07!12;UBERON:0007277!2.18e-07!12;UBERON:0004111!2.52e-07!241;UBERON:0000956!3.95e-07!25;UBERON:0000203!3.95e-07!25;UBERON:0000025!5.95e-07!194;UBERON:0005174!6.31e-07!5;UBERON:0001137!6.31e-07!5;UBERON:0002619!7.42e-07!22;UBERON:0000988!9.12e-07!3;UBERON:0002771!9.31e-07!3;UBERON:0004732!9.90e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.71e-21;1!UBERON:0009661;5.71e-21;1!UBERON:0002950;5.71e-21;1!UBERON:0001891;5.71e-21;1!UBERON:0001954;3.52e-11;2!UBERON:0002148;3.52e-11;2!UBERON:0006331;3.52e-11;2!UBERON:0009662;3.52e-11;2!UBERON:0003022;3.52e-11;2!UBERON:0002421;3.52e-11;2!UBERON:0002600;3.52e-11;2!UBERON:0000125;1.01e-09;9!UBERON:0002308;1.01e-09;9!UBERON:0000988;7.02e-08;3!UBERON:0003528;4.31e-07;34!UBERON:0002020;4.31e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.45e-21,1;UBERON:0009661,3.45e-21,1;UBERON:0002950,3.45e-21,1;UBERON:0001891,3.45e-21,1;UBERON:0009616,3.45e-21,1;UBERON:0010286,3.45e-21,1;UBERON:0001954,3.02e-11,2;UBERON:0003022,3.02e-11,2;UBERON:0002421,3.02e-11,2;UBERON:0002600,3.02e-11,2;UBERON:0002148,3.70e-11,2;UBERON:0006331,3.70e-11,2;UBERON:0009662,3.70e-11,2;UBERON:0000125,9.24e-10,9;UBERON:0002308,9.24e-10,9;UBERON:0003528,2.18e-09,34;UBERON:0002020,2.18e-09,34;UBERON:0000988,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.308097234229289,0,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.258565912723101,1.45455861916959,0,0,0.106787412567695,0.628817220398664,0,0.496166021811951,0,0,0,0.544017803369474,4.2617281983859,2.75711019087115,0.983617892129413,0,0,0.122026264901963,0.3755727921195,0,0.998361463831671,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43670473151436,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.620060389503552,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,1.86341458096887,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0.25458863311266,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p@chr8:48572027..48572044,- | |||
}} |
Revision as of 05:26, 14 September 2013
Short description: | p@chr8:48572027..48572044, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:48572027..48572044, - |
Coexpression cluster: | C3574_Mesenchymal_mature_breast_skeletal_medulla_heart_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.45e-21 | 1 |
midbrain nucleus | 3.45e-21 | 1 |
regional part of midbrain | 3.45e-21 | 1 |
midbrain | 3.45e-21 | 1 |
presumptive midbrain | 3.45e-21 | 1 |
midbrain neural tube | 3.45e-21 | 1 |
Ammon's horn | 3.02e-11 | 2 |
lobe parts of cerebral cortex | 3.02e-11 | 2 |
hippocampal formation | 3.02e-11 | 2 |
limbic lobe | 3.02e-11 | 2 |
locus ceruleus | 3.70e-11 | 2 |
brainstem nucleus | 3.70e-11 | 2 |
hindbrain nucleus | 3.70e-11 | 2 |
neural nucleus | 9.24e-10 | 9 |
nucleus of brain | 9.24e-10 | 9 |
brain grey matter | 2.18e-09 | 34 |
gray matter | 2.18e-09 | 34 |
pons | 7.26e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.