FFCP PHASE1:Hg19::chr8:48173514..48173554,+: Difference between revisions
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{{FFCP | 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69436420886,11.0703855805403,13.7023360101584,19.7623288546464,50.1118349213363,49.4180707562914,16.1195187117824,16.3599316893057,16.0893699835758,18.7508975222338,22.3895432559792,16.9064132103342,16.9341650613723,19.0550963941681,16.6317804623575,19.369024648642,18.3191282238258,22.9399587203438,18.7868177820274,13.6853048587482,14.8871360152477,13.0436265452933,16.3780793806968,12.947377213739,14.6473463953678,19.2759578754713,14.1781935296085,31.5542956717376,18.3124108801363,22.8015825857998,25.0678864783439,20.878468303487,27.7606776103032,14.8317269413624,33.8817714372383,15.6596575179127,16.7762384879082,11.113078767544,15.173675679401,8.95444205407437,25.3217186671997,33.3311755359635,30.3905331026915,17.7480915209242,13.5153952522458,16.3994571896286,9.67204956847356,9.11579868532147,49.7730370146231,10.3275963684876,13.0207543507096,17.0108010026078,19.6565909307848,30.9673865029686,28.1045124066974,12.7991933347155,32.8610527457954,11.3661886576138,19.8630583748393,10.4940391643549,11.4701196329944,12.4415452006595,16.3704795268674,31.161370493641,17.7710514297163,20.6406216182906,23.2533566037015,35.0748618167777,28.8770330723475,56.9817816332709,17.490239285938,60.4869584159613,22.4159809519932,19.3971769029876,16.843501254426,40.2074949103837,63.7634593465132,63.8535436228605,30.3572219076317,34.5338223823754,43.7073835573857,36.1705446215346,35.6923550647886,23.8498955957492,44.4745857020981,15.408002275821,28.4193138729832,12.5856091504165,40.0408757114858,47.5409770857897,32.7164928319269,18.9602764581309,33.605102483023,17.8096552247367,17.3598232560703,24.9876785706807,42.6837534788254,44.5214516209893,57.4589294273292,46.2301256313581,42.6640351034211,19.7372796068586,27.7878259898005,24.094360477268,13.5428173297971,46.0703578855327,55.486814166106,46.129385921984,74.4455365718743,21.0224617285454,17.5155661084784,30.1818896609857,42.820931775404,39.9898463262122,25.1752881082852,17.3520986951628,36.5777812683395,26.5525346958043,51.850350213051,51.1368883485318,20.513121165769,22.9320810185784,40.0983412831042,40.451484603578,18.3661452081638,30.4251976529514,36.0770114128614,24.6587235354014,23.900586793153,38.7105410615891,39.5809170114655,22.1280841366157,21.6442048088261,29.2137064631741,25.2017555398455,18.3021767541949,19.1107787795487,27.2927253586613,20.8078495264315,14.7520689228546,23.9548669759521,11.0875831404747,24.3561030581022,31.0855035557849,40.2375877154822,57.8946755719582,45.5463947678088,64.0404285160903,26.9354266026301,20.5309467250676,20.0652811080656,17.4847648403166,31.511258856222,38.978583158871,10.1340915253699,36.5133748833798,43.3687744477546,30.8538681135882,15.9731487806548,31.5785964412308,47.5054634365264,22.8865247068087,22.3192423257072,14.8215846120591,24.1526513734396,64.2696021656935,33.4872376885315,23.507691636838,40.3895199214553,31.0041195270571,35.3444059175706,38.0899325171088,15.6237907630036,24.4953083174652,13.4114234258375,21.4482922219634,18.6844128057919,14.9504231193496,24.7832856273016,18.4380009633237,22.6980401851067,12.033961886034,23.415617749436,34.8353369203032,26.5334220626809,30.4093007833972,35.1836070136618,40.7090177802996,20.0225620491619,38.3621734348402,27.9208337825727,40.92512277286,42.444609681226,20.0299408065204,12.3203988390701,46.8096768451383,40.1644350198988,36.9252995766075,39.3177787391007,44.3985758851296,54.0602390403432,23.0850769413928,23.4640942403454,59.7760662054217,45.9792681496784,48.6002445155424,27.5745097219706,15.0667191382519|short_description=p1@KIAA0146}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23514 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28971 | |||
|TSSclassifier=S | |||
|UniProt=E5RGV8,B4E0Y6,E7EVI9,E5RHG3,E5RIU7,B4DMX9,E5RG05,B4DFV2 | |||
|association_with_transcript=0bp_to_ENST00000517824,ENST00000518074,ENST00000519661,ENST00000521550,ENST00000522117,ENST00000522222,ENST00000522900,ENST00000524033,ENST00000524126,ENST00000524141,ENST00000541342,uc003xqd.2,uc003xqe.2,uc010lxs.2,uc011lcz.1,uc011lda.1,uc011ldb.1,uc011ldc.1,uc011ldd.1_5end | |||
|description=CAGE_peak_1_at_KIAA0146_5end | |||
|id=chr8:48173514..48173554,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.03e-07!172;CL:0000566!1.03e-07!172;CL:0002032!9.91e-07!165;CL:0000837!9.91e-07!165 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.34e-08,168;CL:0002032,2.49e-07,161;CL:0000837,2.49e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.08e-08;82 | |||
|ontology_enrichment_disease=DOID:8692!3.98e-08!31;DOID:1240!4.93e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.98e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.98e-08,31;DOID:1240,4.93e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-21!115;UBERON:0000955!6.45e-19!69;UBERON:0006238!6.45e-19!69;UBERON:0001049!7.90e-19!57;UBERON:0005068!7.90e-19!57;UBERON:0006241!7.90e-19!57;UBERON:0007135!7.90e-19!57;UBERON:0001017!2.68e-18!82;UBERON:0002616!3.49e-18!59;UBERON:0005743!3.01e-17!86;UBERON:0000073!5.76e-17!94;UBERON:0001016!5.76e-17!94;UBERON:0003080!9.46e-16!42;UBERON:0002780!1.70e-15!41;UBERON:0001890!1.70e-15!41;UBERON:0006240!1.70e-15!41;UBERON:0002020!1.07e-13!34;UBERON:0003528!1.07e-13!34;UBERON:0001869!1.26e-13!32;UBERON:0001893!1.31e-13!34;UBERON:0002791!3.87e-13!33;UBERON:0002346!5.19e-12!90;UBERON:0002619!1.05e-11!22;UBERON:0003075!1.46e-11!86;UBERON:0007284!1.46e-11!86;UBERON:0000956!3.43e-11!25;UBERON:0000203!3.43e-11!25;UBERON:0001950!9.89e-11!20;UBERON:0000153!1.39e-10!129;UBERON:0007811!1.39e-10!129;UBERON:0000033!1.64e-09!123;UBERON:0000924!1.11e-08!173;UBERON:0006601!1.11e-08!173;UBERON:0003056!2.66e-08!61;UBERON:0004121!2.87e-08!169 | |||
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| |||
|short_description=p1@KIAA0146 | |||
}} |
Revision as of 05:24, 14 September 2013
Short description: | p1@KIAA0146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KIAA0146_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517824, ENST00000518074, ENST00000519661, ENST00000521550, ENST00000522117, ENST00000522222, ENST00000522900, ENST00000524033, ENST00000524126, ENST00000524141, ENST00000541342, uc003xqd.2, uc003xqe.2, uc010lxs.2, uc011lcz.1, uc011lda.1, uc011ldb.1, uc011ldc.1, uc011ldd.1_5end |
EntrezGene: | KIAA0146 |
HGNC: | 28971 |
UniProt: | E5RGV8B4E0Y6E7EVI9E5RHG3E5RIU7B4DMX9E5RG05B4DFV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.34e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.49e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-20 | 114 |
brain | 1.20e-18 | 68 |
future brain | 1.20e-18 | 68 |
neural tube | 1.45e-18 | 56 |
neural rod | 1.45e-18 | 56 |
future spinal cord | 1.45e-18 | 56 |
neural keel | 1.45e-18 | 56 |
central nervous system | 4.99e-18 | 81 |
nervous system | 1.21e-17 | 89 |
regional part of nervous system | 1.56e-17 | 53 |
regional part of brain | 1.56e-17 | 53 |
regional part of forebrain | 1.70e-15 | 41 |
forebrain | 1.70e-15 | 41 |
anterior neural tube | 1.70e-15 | 41 |
future forebrain | 1.70e-15 | 41 |
brain grey matter | 1.07e-13 | 34 |
gray matter | 1.07e-13 | 34 |
cerebral hemisphere | 1.26e-13 | 32 |
telencephalon | 1.31e-13 | 34 |
regional part of telencephalon | 5.48e-13 | 32 |
regional part of cerebral cortex | 1.05e-11 | 22 |
neurectoderm | 2.62e-11 | 86 |
cerebral cortex | 3.43e-11 | 25 |
pallium | 3.43e-11 | 25 |
neural plate | 7.29e-11 | 82 |
presumptive neural plate | 7.29e-11 | 82 |
neocortex | 9.89e-11 | 20 |
organ system subdivision | 1.32e-08 | 223 |
pre-chordal neural plate | 2.40e-08 | 61 |
ectoderm-derived structure | 5.70e-08 | 171 |
ectoderm | 5.70e-08 | 171 |
presumptive ectoderm | 5.70e-08 | 171 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.98e-08 | 31 |
leukemia | 4.93e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.