FFCP PHASE1:Mm9::chr4:57747589..57747608,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=847|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:57747589..57747608,+|id=chr4:57747589..57747608,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.24e-07!18;UBERON:0000948!1.24e-07!18;UBERON:0005498!1.24e-07!18;UBERON:0004140!1.24e-07!18;UBERON:0009881!1.24e-07!18;UBERON:0004141!1.24e-07!18;UBERON:0003084!1.24e-07!18;UBERON:0007005!1.24e-07!18;UBERON:0004139!1.24e-07!18;UBERON:0004291!1.24e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.86e-18,18;UBERON:0000948,2.86e-18,18;UBERON:0005498,2.86e-18,18;UBERON:0004140,2.86e-18,18;UBERON:0009881,2.86e-18,18;UBERON:0004141,2.86e-18,18;UBERON:0003084,2.86e-18,18;UBERON:0007005,2.86e-18,18;UBERON:0004139,2.86e-18,18;UBERON:0004291,2.86e-18,18;UBERON:0004535,8.36e-14,23;UBERON:0001009,8.36e-14,23;UBERON:0004872,1.26e-10,33;UBERON:0000025,1.22e-08,114;UBERON:0003914,5.50e-08,47;UBERON:0004111,9.42e-08,122;UBERON:0003103,1.39e-07,43;UBERON:0002048,5.88e-07,14;UBERON:0000117,5.88e-07,14;UBERON:0000171,5.88e-07,14;UBERON:0000170,5.88e-07,14;UBERON:0005597,5.88e-07,14;UBERON:0000118,5.88e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0,1.80867168663147,2.70454026412121,1.38233250462643,0,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,1.1356888414743,1.32391173005411,0,0,0,0.650602214813519,0,0,0.90422890701429,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.527853372491847,0,1.66828349535359,0.696504333044333,0,0,0,0,0,1.03562886267751,2.11073453982987,2.52086886045421,2.3674473558521,2.55793501271625,4.01094493507183,3.0229412817553,1.3413670069981,2.91913355917924,2.46839774870221,2.46251196118643,0.405344047729279,0.146199987425332,0.878200461164203,0.134206418760372,0,0.205809224758569,0,0,0.426576501070468,1.16118335930219,0.257734922644187,0.201683524623343,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0,0,0.432276099749388,0,0,0.456994050438915,0,0.407302655690628,0.387904974335251,0.420814919341911,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,2.03694102930226,2.11221223459652,1.50755631697634,0.476087281772027,1.36593553500459,0.945810864637146,2.87904096543407,2.07291199254733,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0.484393280087717,0.180938774784468,0.238744688006273,0,0,0.556275906031529,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0.813277868507395,0.540026704109006,0.209088296014469,0.436725127492355,0.674321731924103,0.165306911450672,0.523511883968059,0,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,1.68956125490778,0.704143431874524,1.69265700297135,0.734015410979976,0,0.288030006257865,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0,0,0,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.229741875822453,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,1.31534855718921,0.135804113845862,1.12228454331548,0.237270036248348,0.689531376628944,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0|short_description=p@chr4:57747589..57747608,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=847 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:57747589..57747608,+ | |||
|id=chr4:57747589..57747608,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.24e-07!18;UBERON:0000948!1.24e-07!18;UBERON:0005498!1.24e-07!18;UBERON:0004140!1.24e-07!18;UBERON:0009881!1.24e-07!18;UBERON:0004141!1.24e-07!18;UBERON:0003084!1.24e-07!18;UBERON:0007005!1.24e-07!18;UBERON:0004139!1.24e-07!18;UBERON:0004291!1.24e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.86e-18,18;UBERON:0000948,2.86e-18,18;UBERON:0005498,2.86e-18,18;UBERON:0004140,2.86e-18,18;UBERON:0009881,2.86e-18,18;UBERON:0004141,2.86e-18,18;UBERON:0003084,2.86e-18,18;UBERON:0007005,2.86e-18,18;UBERON:0004139,2.86e-18,18;UBERON:0004291,2.86e-18,18;UBERON:0004535,8.36e-14,23;UBERON:0001009,8.36e-14,23;UBERON:0004872,1.26e-10,33;UBERON:0000025,1.22e-08,114;UBERON:0003914,5.50e-08,47;UBERON:0004111,9.42e-08,122;UBERON:0003103,1.39e-07,43;UBERON:0002048,5.88e-07,14;UBERON:0000117,5.88e-07,14;UBERON:0000171,5.88e-07,14;UBERON:0000170,5.88e-07,14;UBERON:0005597,5.88e-07,14;UBERON:0000118,5.88e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779358013808606,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.608930956624282,0,1.80867168663147,2.70454026412121,1.38233250462643,0,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,1.1356888414743,1.32391173005411,0,0,0,0.650602214813519,0,0,0.90422890701429,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0.527853372491847,0,1.66828349535359,0.696504333044333,0,0,0,0,0,1.03562886267751,2.11073453982987,2.52086886045421,2.3674473558521,2.55793501271625,4.01094493507183,3.0229412817553,1.3413670069981,2.91913355917924,2.46839774870221,2.46251196118643,0.405344047729279,0.146199987425332,0.878200461164203,0.134206418760372,0,0.205809224758569,0,0,0.426576501070468,1.16118335930219,0.257734922644187,0.201683524623343,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0,0,0.432276099749388,0,0,0.456994050438915,0,0.407302655690628,0.387904974335251,0.420814919341911,0.189709611372772,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,2.03694102930226,2.11221223459652,1.50755631697634,0.476087281772027,1.36593553500459,0.945810864637146,2.87904096543407,2.07291199254733,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0.484393280087717,0.180938774784468,0.238744688006273,0,0,0.556275906031529,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0.813277868507395,0.540026704109006,0.209088296014469,0.436725127492355,0.674321731924103,0.165306911450672,0.523511883968059,0,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,1.68956125490778,0.704143431874524,1.69265700297135,0.734015410979976,0,0.288030006257865,0,0,0.308132871494482,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0,0,0,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.320125762024346,0.229741875822453,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.338458431566706,0.365855945745545,1.31534855718921,0.135804113845862,1.12228454331548,0.237270036248348,0.689531376628944,0.818462086339379,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr4:57747589..57747608,+ | |||
}} |
Revision as of 05:16, 14 September 2013
Short description: | p@chr4:57747589..57747608, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:57747589..57747608, + |
Coexpression cluster: | MCL_coexpression_mm9:847 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.86e-18 | 18 |
heart | 2.86e-18 | 18 |
primitive heart tube | 2.86e-18 | 18 |
primary heart field | 2.86e-18 | 18 |
anterior lateral plate mesoderm | 2.86e-18 | 18 |
heart tube | 2.86e-18 | 18 |
heart primordium | 2.86e-18 | 18 |
cardiac mesoderm | 2.86e-18 | 18 |
cardiogenic plate | 2.86e-18 | 18 |
heart rudiment | 2.86e-18 | 18 |
cardiovascular system | 8.36e-14 | 23 |
circulatory system | 8.36e-14 | 23 |
splanchnic layer of lateral plate mesoderm | 1.26e-10 | 33 |
tube | 1.22e-08 | 114 |
epithelial tube | 5.50e-08 | 47 |
anatomical conduit | 9.42e-08 | 122 |
compound organ | 1.39e-07 | 43 |
lung | 5.88e-07 | 14 |
respiratory tube | 5.88e-07 | 14 |
respiration organ | 5.88e-07 | 14 |
pair of lungs | 5.88e-07 | 14 |
lung primordium | 5.88e-07 | 14 |
lung bud | 5.88e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.