FFCP PHASE1:Mm9::chr4:49420914..49420917,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=120|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:49420914..49420917,-|id=chr4:49420914..49420917,-|ontology_enrichment_celltype=CL:0000181!3.16e-13!5;CL:0000417!3.16e-13!5;CL:0000668!3.16e-13!5;CL:0000412!3.16e-13!5;CL:0000182!3.16e-13!5|ontology_enrichment_celltype_v019_2=CL:0000182,9.46e-13,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.62e-15!22;UBERON:0007499!5.62e-15!22;UBERON:0006925!5.62e-15!22;UBERON:0009497!5.62e-15!22;UBERON:0000015!5.62e-15!22;UBERON:0002423!5.62e-15!22;UBERON:0006235!5.62e-15!22;UBERON:0008835!5.62e-15!22;UBERON:0003894!5.62e-15!22;UBERON:0004161!5.62e-15!22;UBERON:0008836!5.62e-15!22;UBERON:0009854!2.64e-14!23;UBERON:0009856!2.64e-14!23;UBERON:0002365!4.01e-13!25;UBERON:0002330!4.01e-13!25;UBERON:0005172!5.11e-13!49;UBERON:0005173!5.11e-13!49;UBERON:0002417!5.11e-13!49;UBERON:0000916!5.11e-13!49;UBERON:0009569!2.12e-09!66;UBERON:0005177!4.72e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.19e-11,22;UBERON:0007499,3.19e-11,22;UBERON:0006925,3.19e-11,22;UBERON:0009497,3.19e-11,22;UBERON:0000015,3.19e-11,22;UBERON:0002423,3.19e-11,22;UBERON:0006235,3.19e-11,22;UBERON:0008835,3.19e-11,22;UBERON:0003894,3.19e-11,22;UBERON:0004161,3.19e-11,22;UBERON:0008836,3.19e-11,22;UBERON:0009854,9.29e-11,23;UBERON:0009856,9.29e-11,23;UBERON:0002365,6.10e-10,25;UBERON:0002330,6.10e-10,25;UBERON:0005172,7.37e-08,49;UBERON:0005173,7.37e-08,49;UBERON:0002417,7.37e-08,49;UBERON:0000916,7.37e-08,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,7.14754059192436,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.31399745568275,1.1105744752962,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,1.51547326768267,0.538192240565737,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:49420914..49420917,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:49420914..49420917,- | |||
|id=chr4:49420914..49420917,- | |||
|ontology_enrichment_celltype=CL:0000181!3.16e-13!5;CL:0000417!3.16e-13!5;CL:0000668!3.16e-13!5;CL:0000412!3.16e-13!5;CL:0000182!3.16e-13!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.46e-13,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.62e-15!22;UBERON:0007499!5.62e-15!22;UBERON:0006925!5.62e-15!22;UBERON:0009497!5.62e-15!22;UBERON:0000015!5.62e-15!22;UBERON:0002423!5.62e-15!22;UBERON:0006235!5.62e-15!22;UBERON:0008835!5.62e-15!22;UBERON:0003894!5.62e-15!22;UBERON:0004161!5.62e-15!22;UBERON:0008836!5.62e-15!22;UBERON:0009854!2.64e-14!23;UBERON:0009856!2.64e-14!23;UBERON:0002365!4.01e-13!25;UBERON:0002330!4.01e-13!25;UBERON:0005172!5.11e-13!49;UBERON:0005173!5.11e-13!49;UBERON:0002417!5.11e-13!49;UBERON:0000916!5.11e-13!49;UBERON:0009569!2.12e-09!66;UBERON:0005177!4.72e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.19e-11,22;UBERON:0007499,3.19e-11,22;UBERON:0006925,3.19e-11,22;UBERON:0009497,3.19e-11,22;UBERON:0000015,3.19e-11,22;UBERON:0002423,3.19e-11,22;UBERON:0006235,3.19e-11,22;UBERON:0008835,3.19e-11,22;UBERON:0003894,3.19e-11,22;UBERON:0004161,3.19e-11,22;UBERON:0008836,3.19e-11,22;UBERON:0009854,9.29e-11,23;UBERON:0009856,9.29e-11,23;UBERON:0002365,6.10e-10,25;UBERON:0002330,6.10e-10,25;UBERON:0005172,7.37e-08,49;UBERON:0005173,7.37e-08,49;UBERON:0002417,7.37e-08,49;UBERON:0000916,7.37e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,7.14754059192436,0.896053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.31399745568275,1.1105744752962,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0,0,1.51547326768267,0.538192240565737,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:49420914..49420917,- | |||
}} |
Revision as of 05:11, 14 September 2013
Short description: | p@chr4:49420914..49420917, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:49420914..49420917, - |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.46e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.19e-11 | 22 |
epithelial sac | 3.19e-11 | 22 |
digestive gland | 3.19e-11 | 22 |
epithelium of foregut-midgut junction | 3.19e-11 | 22 |
anatomical boundary | 3.19e-11 | 22 |
hepatobiliary system | 3.19e-11 | 22 |
foregut-midgut junction | 3.19e-11 | 22 |
hepatic diverticulum | 3.19e-11 | 22 |
liver primordium | 3.19e-11 | 22 |
septum transversum | 3.19e-11 | 22 |
liver bud | 3.19e-11 | 22 |
digestive tract diverticulum | 9.29e-11 | 23 |
sac | 9.29e-11 | 23 |
exocrine gland | 6.10e-10 | 25 |
exocrine system | 6.10e-10 | 25 |
abdomen element | 7.37e-08 | 49 |
abdominal segment element | 7.37e-08 | 49 |
abdominal segment of trunk | 7.37e-08 | 49 |
abdomen | 7.37e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.