FFCP PHASE1:Mm9::chr4:48137775..48137810,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67727|HGNC=|UniProt=Q9D0I4,Q9D614,B1AVI2|association_with_transcript=0bp_to_ENSMUST00000064765,ENSMUST00000077450,ENSMUST00000107720,ENSMUST00000107721,ENSMUST00000153502,NM_026343,uc008sux.1,uc012ddx.1_5end|description=CAGE_peak_1_at_Stx17_5end|id=chr4:48137775..48137810,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!2.96e-07!47;UBERON:0007023!3.11e-07!51;UBERON:0009569!6.42e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.07e-07,45;UBERON:0007023,3.11e-07,51;UBERON:0009569,6.42e-07,66|phase1_expression=19.8584570409945,4.88565570695105,8.64498554840118,22.0798874253986,22.0394121176393,27.0285627778143,39.2469236200483,15.3656754895476,3.51971805379167,3.97909694747389,5.13653904676515,5.2649624936922,25.6801094896809,24.1280310676433,25.649451659806,31.5861417128128,27.9824751251259,31.5462165358238,38.9404991440298,32.6780031884483,20.750562796861,13.8014422169231,18.5451850288644,24.3188482645978,17.2056960800378,6.31655160526522,15.5074318617267,13.3592164265251,36.2944731161674,23.9428623271934,24.1686256614282,19.0509202037889,25.2176562909674,31.6963362030877,19.0642069035841,13.2987716286794,16.5377178572519,51.8979222113766,30.4720784364282,48.1641844455894,66.4701581475046,47.8131839470912,41.7538903606792,18.5068322424099,18.4506014819517,17.4369414553597,6.25913075478431,8.93903141159831,4.39372365468944,10.4992145500113,10.7789544651529,1.43752564364972,26.8452169692378,12.3311564141929,20.1656279485478,17.4936416504444,23.7822755149168,19.5955395065428,10.3181395038395,18.5146842745212,12.6766280701236,5.42151251310611,8.89294796111139,3.1496490104849,5.93319817540185,5.6838409195688,2.09720077362883,5.76327457982332,8.29516898467821,6.21027316325777,7.99234853135252,9.71213346972932,12.589506834242,8.69684674426174,8.53024692062304,8.27296907949019,14.3150645299205,23.7498448838449,19.0472101237742,13.4524013484798,14.1805847583735,15.6274011167028,17.0301629390842,20.2594539611405,18.7941844765476,16.4992007865254,21.7828671622628,16.9623495701024,14.3122505399718,18.1371744256285,28.1168554040627,40.4399222181252,7.47968467078526,24.8263468153396,25.9910566979068,28.6737207742295,23.0328849016073,16.0204503223374,13.5088722393492,15.9002808529653,20.9856695467254,16.6824420638613,7.64415719119937,14.2213340630666,11.9070072556168,16.7217511213565,14.1546844604139,23.2935114626882,40.1353719653116,64.7207726322636,20.471268558404,28.9242204396534,28.1350906652391,45.3675148063394,52.56215208966,42.60097446076,14.0901131608593,41.6446147929346,23.8844849026466,24.7503280419536,28.4885558813908,32.9715172131951,59.6453635897991,21.0802173848314,14.4518227701284,26.8229907969021,8.74650408893218,7.7987355029143,7.87835407853001,27.2618963716777,21.9600289352941,14.0732874366408,21.9018643442268,28.8958466783273,24.103413168909,27.7432559845866,20.3678727700633,30.728521740693,30.0740082536073,41.6674874655218,19.6481868873683,20.0014830857121,21.0672691872259,24.5648853072216,18.4378912700098,19.2170580427275,18.4592397382666,31.3031078594209,9.91612767491074,24.5837904218165,25.5129130037726,17.3164628617784,27.5266776733342,34.4769644856945,35.6003095985742,26.8696260204966,15.4486901208912,11.3233079130475,7.38825098428541,17.6056906655177,19.9347150983932,18.0062061461015,21.5437709382541,18.6926020160034,24.065669610431,22.3232586960392,22.534965717568,21.8351190226607,20.7345410890985,28.0726363575253,29.9954595319666,35.8189969192064,37.3235195994786,39.3224806967889,23.5524742391823,15.7444056940305,30.0681092515256,18.5115396664481,24.9547253126224,19.9723537799977,21.3919985794675,19.9666689377109,21.5706702529524,20.1639163679313,18.0321043386914,23.3872515708095,21.8661631656234,25.4664284212673,26.3201517610812,17.0775687644302,27.4495323340862,31.0660386276813,12.8974172648096,17.2515254040691,15.7790829942313,16.0884548997798,20.3650111526007,17.183275873128,22.7651533647326,23.4700135287567,21.351826986427,21.5945036863151,41.799820419288,25.8609913859946,26.142346350056,28.1077640481067,23.3289139596778,23.8765388154893,20.624693994295,25.0295639582205,24.1581487894803,27.4561413188081,27.3159592401974,29.3991348658118,31.8278426576852,36.3713584243841,36.4176749449482,40.5252557945228,37.3201444136541,19.8965982359009,22.3262017725575,21.7273709792241,22.0608833391192,34.3387827755722,40.7054625915084,29.4651808265276,32.157569397663,30.7835918611797,30.45586081358,35.7222026080309,35.9184762281063,39.4891929927527,18.0949540727127,11.4220193601929,20.6540994667995,25.1102439137307,28.0963532478636,25.5521476771003,12.9508606847574,45.9497087511959,14.8288863125641,10.9322848403059,14.2179442503647,14.0991590792006,16.2643032080148,15.8522857241746,15.382806663646,12.2747460322751,17.7879500075936,25.7057053137446,37.3302424097746,20.6556100254016,24.2701569436828,30.5194727499191,21.2392221343941,16.5090832585387,16.0231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| ||
|EntrezGene=67727 | |||
|HGNC= | |||
|UniProt=Q9D0I4,Q9D614,B1AVI2 | |||
|association_with_transcript=0bp_to_ENSMUST00000064765,ENSMUST00000077450,ENSMUST00000107720,ENSMUST00000107721,ENSMUST00000153502,NM_026343,uc008sux.1,uc012ddx.1_5end | |||
|description=CAGE_peak_1_at_Stx17_5end | |||
|id=chr4:48137775..48137810,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.96e-07!47;UBERON:0007023!3.11e-07!51;UBERON:0009569!6.42e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.07e-07,45;UBERON:0007023,3.11e-07,51;UBERON:0009569,6.42e-07,66 | |||
|phase1_expression=19.8584570409945,4.88565570695105,8.64498554840118,22.0798874253986,22.0394121176393,27.0285627778143,39.2469236200483,15.3656754895476,3.51971805379167,3.97909694747389,5.13653904676515,5.2649624936922,25.6801094896809,24.1280310676433,25.649451659806,31.5861417128128,27.9824751251259,31.5462165358238,38.9404991440298,32.6780031884483,20.750562796861,13.8014422169231,18.5451850288644,24.3188482645978,17.2056960800378,6.31655160526522,15.5074318617267,13.3592164265251,36.2944731161674,23.9428623271934,24.1686256614282,19.0509202037889,25.2176562909674,31.6963362030877,19.0642069035841,13.2987716286794,16.5377178572519,51.8979222113766,30.4720784364282,48.1641844455894,66.4701581475046,47.8131839470912,41.7538903606792,18.5068322424099,18.4506014819517,17.4369414553597,6.25913075478431,8.93903141159831,4.39372365468944,10.4992145500113,10.7789544651529,1.43752564364972,26.8452169692378,12.3311564141929,20.1656279485478,17.4936416504444,23.7822755149168,19.5955395065428,10.3181395038395,18.5146842745212,12.6766280701236,5.42151251310611,8.89294796111139,3.1496490104849,5.93319817540185,5.6838409195688,2.09720077362883,5.76327457982332,8.29516898467821,6.21027316325777,7.99234853135252,9.71213346972932,12.589506834242,8.69684674426174,8.53024692062304,8.27296907949019,14.3150645299205,23.7498448838449,19.0472101237742,13.4524013484798,14.1805847583735,15.6274011167028,17.0301629390842,20.2594539611405,18.7941844765476,16.4992007865254,21.7828671622628,16.9623495701024,14.3122505399718,18.1371744256285,28.1168554040627,40.4399222181252,7.47968467078526,24.8263468153396,25.9910566979068,28.6737207742295,23.0328849016073,16.0204503223374,13.5088722393492,15.9002808529653,20.9856695467254,16.6824420638613,7.64415719119937,14.2213340630666,11.9070072556168,16.7217511213565,14.1546844604139,23.2935114626882,40.1353719653116,64.7207726322636,20.471268558404,28.9242204396534,28.1350906652391,45.3675148063394,52.56215208966,42.60097446076,14.0901131608593,41.6446147929346,23.8844849026466,24.7503280419536,28.4885558813908,32.9715172131951,59.6453635897991,21.0802173848314,14.4518227701284,26.8229907969021,8.74650408893218,7.7987355029143,7.87835407853001,27.2618963716777,21.9600289352941,14.0732874366408,21.9018643442268,28.8958466783273,24.103413168909,27.7432559845866,20.3678727700633,30.728521740693,30.0740082536073,41.6674874655218,19.6481868873683,20.0014830857121,21.0672691872259,24.5648853072216,18.4378912700098,19.2170580427275,18.4592397382666,31.3031078594209,9.91612767491074,24.5837904218165,25.5129130037726,17.3164628617784,27.5266776733342,34.4769644856945,35.6003095985742,26.8696260204966,15.4486901208912,11.3233079130475,7.38825098428541,17.6056906655177,19.9347150983932,18.0062061461015,21.5437709382541,18.6926020160034,24.065669610431,22.3232586960392,22.534965717568,21.8351190226607,20.7345410890985,28.0726363575253,29.9954595319666,35.8189969192064,37.3235195994786,39.3224806967889,23.5524742391823,15.7444056940305,30.0681092515256,18.5115396664481,24.9547253126224,19.9723537799977,21.3919985794675,19.9666689377109,21.5706702529524,20.1639163679313,18.0321043386914,23.3872515708095,21.8661631656234,25.4664284212673,26.3201517610812,17.0775687644302,27.4495323340862,31.0660386276813,12.8974172648096,17.2515254040691,15.7790829942313,16.0884548997798,20.3650111526007,17.183275873128,22.7651533647326,23.4700135287567,21.351826986427,21.5945036863151,41.799820419288,25.8609913859946,26.142346350056,28.1077640481067,23.3289139596778,23.8765388154893,20.624693994295,25.0295639582205,24.1581487894803,27.4561413188081,27.3159592401974,29.3991348658118,31.8278426576852,36.3713584243841,36.4176749449482,40.5252557945228,37.3201444136541,19.8965982359009,22.3262017725575,21.7273709792241,22.0608833391192,34.3387827755722,40.7054625915084,29.4651808265276,32.157569397663,30.7835918611797,30.45586081358,35.7222026080309,35.9184762281063,39.4891929927527,18.0949540727127,11.4220193601929,20.6540994667995,25.1102439137307,28.0963532478636,25.5521476771003,12.9508606847574,45.9497087511959,14.8288863125641,10.9322848403059,14.2179442503647,14.0991590792006,16.2643032080148,15.8522857241746,15.382806663646,12.2747460322751,17.7879500075936,25.7057053137446,37.3302424097746,20.6556100254016,24.2701569436828,30.5194727499191,21.2392221343941,16.5090832585387,16.0231485191318,14.1453809816924,15.0603965369194,23.6725063916824,23.5169746783081,22.1755574981278,22.4593348382374,24.3348303610578,7.37930260024991,13.4076206222643,32.0013229408561,24.6683698822895,16.4285528404098,18.4329850127169,29.793159251902,17.4801441250029,21.2268236576736,12.4830629136986,15.7230044402686,20.9713750155182,28.2276349510351,32.1528193235886,47.6320058752921,28.7692651907303,28.7687349047559,37.2599842421289,23.3184669303881,25.4032663754398,26.4849865236672,18.9875918526165,29.2607353244144,31.8342692337928,27.202151316484,26.0807117455436,12.7483822495391,12.3157278044819,14.0963973280512,42.005507192665,20.87817557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| |||
|short_description=p1@Stx17 | |||
}} | |||
Revision as of 05:10, 14 September 2013
| Short description: | p1@Stx17 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Stx17_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000064765, ENSMUST00000077450, ENSMUST00000107720, ENSMUST00000107721, ENSMUST00000153502, NM_026343, uc008sux.1, uc012ddx.1_5end |
| EntrezGene: | Stx17 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk mesenchyme | 1.07e-07 | 45 |
| adult organism | 3.11e-07 | 51 |
| subdivision of trunk | 6.42e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
