FFCP PHASE1:Mm9::chr4:45839818..45839834,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75426|HGNC=|MCL_coexpression_id=1065|UniProt=Q80W15|association_with_transcript=-23bp_to_ENSMUST00000044297_5end|description=CAGE_peak_4_at_Igfbpl1_5end|id=chr4:45839818..45839834,-|ontology_enrichment_celltype=CL:0000221!6.80e-14!44;CL:0000133!6.80e-14!44;CL:0002319!6.56e-13!43;CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0002609!2.40e-11!6;CL:0000055!2.99e-10!50;CL:0000540!6.91e-09!33;CL:0000047!6.91e-09!33;CL:0000031!6.91e-09!33;CL:0000404!6.91e-09!33;CL:0002453!6.75e-07!8;CL:0000393!6.78e-07!39;CL:0000211!6.78e-07!39|ontology_enrichment_celltype_v019_2=CL:0002609,4.95e-36,6;CL:0000117,3.56e-25,23;CL:0000337,3.56e-25,23;CL:0002319,6.97e-22,43;CL:0000221,2.36e-21,44;CL:0000133,2.36e-21,44;CL:0000120,5.95e-19,3;CL:0002608,8.99e-19,3;CL:0000540,3.29e-17,33;CL:0000047,3.29e-17,33;CL:0000031,3.29e-17,33;CL:0000404,3.29e-17,33;CL:0000393,2.21e-14,39;CL:0000211,2.21e-14,39;CL:0002321,7.39e-13,70;CL:0002453,7.20e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.40e-09!73;UBERON:0005743!2.40e-09!73;UBERON:0000073!6.58e-09!75;UBERON:0001016!6.58e-09!75;UBERON:0002791!1.55e-07!29;UBERON:0003528!1.55e-07!29;UBERON:0001893!1.55e-07!29;UBERON:0002020!4.72e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0003528,1.16e-15,29;UBERON:0002791,1.16e-15,29;UBERON:0001893,1.16e-15,29;UBERON:0001954,7.19e-14,7;UBERON:0003022,7.19e-14,7;UBERON:0002421,7.19e-14,7;UBERON:0000349,7.19e-14,7;UBERON:0002600,7.19e-14,7;UBERON:0000956,1.87e-13,21;UBERON:0001869,1.87e-13,21;UBERON:0000203,1.87e-13,21;UBERON:0002020,3.26e-13,34;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0002616,1.07e-11,46;UBERON:0000955,2.02e-11,47;UBERON:0006238,2.02e-11,47;UBERON:0002780,2.18e-11,39;UBERON:0001890,2.18e-11,39;UBERON:0006240,2.18e-11,39;UBERON:0003080,4.45e-11,40;UBERON:0001049,3.31e-10,52;UBERON:0005068,3.31e-10,52;UBERON:0006241,3.31e-10,52;UBERON:0007135,3.31e-10,52;UBERON:0000073,8.78e-10,54;UBERON:0003056,7.54e-09,49;UBERON:0002346,4.66e-08,64;UBERON:0003075,4.66e-08,64;UBERON:0007284,4.66e-08,64;UBERON:0010371,6.60e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,6.87875966922632,4.7609188134483,1.90149421051854,0,0,0,0,0,0.599200221036809,1.15265491596466,3.11068836925433,3.91517221161903,5.8890989178387,0,0,3.91970557487853,3.45043695665651,3.67687514644008,0,0,0,0.923204014111357,0.457438218012048,2.08365348222704,0,0.56276261003168,0,0,0,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,1.88481528169297,0,0,0,0,0,0,0,0,0,0,0.360124259610698,0,0.136072998302656,0,0,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p4@Igfbpl1}} | ||
|EntrezGene=75426 | |||
|HGNC= | |||
|MCL_coexpression_id=1065 | |||
|UniProt=Q80W15 | |||
|association_with_transcript=-23bp_to_ENSMUST00000044297_5end | |||
|description=CAGE_peak_4_at_Igfbpl1_5end | |||
|id=chr4:45839818..45839834,- | |||
|ontology_enrichment_celltype=CL:0000221!6.80e-14!44;CL:0000133!6.80e-14!44;CL:0002319!6.56e-13!43;CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0002609!2.40e-11!6;CL:0000055!2.99e-10!50;CL:0000540!6.91e-09!33;CL:0000047!6.91e-09!33;CL:0000031!6.91e-09!33;CL:0000404!6.91e-09!33;CL:0002453!6.75e-07!8;CL:0000393!6.78e-07!39;CL:0000211!6.78e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.95e-36,6;CL:0000117,3.56e-25,23;CL:0000337,3.56e-25,23;CL:0002319,6.97e-22,43;CL:0000221,2.36e-21,44;CL:0000133,2.36e-21,44;CL:0000120,5.95e-19,3;CL:0002608,8.99e-19,3;CL:0000540,3.29e-17,33;CL:0000047,3.29e-17,33;CL:0000031,3.29e-17,33;CL:0000404,3.29e-17,33;CL:0000393,2.21e-14,39;CL:0000211,2.21e-14,39;CL:0002321,7.39e-13,70;CL:0002453,7.20e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-09!73;UBERON:0005743!2.40e-09!73;UBERON:0000073!6.58e-09!75;UBERON:0001016!6.58e-09!75;UBERON:0002791!1.55e-07!29;UBERON:0003528!1.55e-07!29;UBERON:0001893!1.55e-07!29;UBERON:0002020!4.72e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0003528,1.16e-15,29;UBERON:0002791,1.16e-15,29;UBERON:0001893,1.16e-15,29;UBERON:0001954,7.19e-14,7;UBERON:0003022,7.19e-14,7;UBERON:0002421,7.19e-14,7;UBERON:0000349,7.19e-14,7;UBERON:0002600,7.19e-14,7;UBERON:0000956,1.87e-13,21;UBERON:0001869,1.87e-13,21;UBERON:0000203,1.87e-13,21;UBERON:0002020,3.26e-13,34;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0002616,1.07e-11,46;UBERON:0000955,2.02e-11,47;UBERON:0006238,2.02e-11,47;UBERON:0002780,2.18e-11,39;UBERON:0001890,2.18e-11,39;UBERON:0006240,2.18e-11,39;UBERON:0003080,4.45e-11,40;UBERON:0001049,3.31e-10,52;UBERON:0005068,3.31e-10,52;UBERON:0006241,3.31e-10,52;UBERON:0007135,3.31e-10,52;UBERON:0000073,8.78e-10,54;UBERON:0003056,7.54e-09,49;UBERON:0002346,4.66e-08,64;UBERON:0003075,4.66e-08,64;UBERON:0007284,4.66e-08,64;UBERON:0010371,6.60e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,6.87875966922632,4.7609188134483,1.90149421051854,0,0,0,0,0,0.599200221036809,1.15265491596466,3.11068836925433,3.91517221161903,5.8890989178387,0,0,3.91970557487853,3.45043695665651,3.67687514644008,0,0,0,0.923204014111357,0.457438218012048,2.08365348222704,0,0.56276261003168,0,0,0,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,1.88481528169297,0,0,0,0,0,0,0,0,0,0,0.360124259610698,0,0.136072998302656,0,0,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p4@Igfbpl1 | |||
}} |
Revision as of 05:05, 14 September 2013
Short description: | p4@Igfbpl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Igfbpl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1065 |
Association with transcript: | -23bp_to_ENSMUST00000044297_5end |
EntrezGene: | Igfbpl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.95e-36 | 6 |
CNS neuron (sensu Vertebrata) | 3.56e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.56e-25 | 23 |
neural cell | 6.97e-22 | 43 |
ectodermal cell | 2.36e-21 | 44 |
neurectodermal cell | 2.36e-21 | 44 |
granule cell | 5.95e-19 | 3 |
hippocampal neuron | 8.99e-19 | 3 |
neuron | 3.29e-17 | 33 |
neuronal stem cell | 3.29e-17 | 33 |
neuroblast | 3.29e-17 | 33 |
electrically signaling cell | 3.29e-17 | 33 |
electrically responsive cell | 2.21e-14 | 39 |
electrically active cell | 2.21e-14 | 39 |
embryonic cell | 7.39e-13 | 70 |
oligodendrocyte precursor cell | 7.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.17e-16 | 73 |
nervous system | 3.58e-16 | 75 |
brain grey matter | 1.16e-15 | 29 |
regional part of telencephalon | 1.16e-15 | 29 |
telencephalon | 1.16e-15 | 29 |
Ammon's horn | 7.19e-14 | 7 |
lobe parts of cerebral cortex | 7.19e-14 | 7 |
hippocampal formation | 7.19e-14 | 7 |
limbic system | 7.19e-14 | 7 |
limbic lobe | 7.19e-14 | 7 |
cerebral cortex | 1.87e-13 | 21 |
cerebral hemisphere | 1.87e-13 | 21 |
pallium | 1.87e-13 | 21 |
gray matter | 3.26e-13 | 34 |
ectoderm-derived structure | 2.01e-12 | 95 |
ectoderm | 2.01e-12 | 95 |
presumptive ectoderm | 2.01e-12 | 95 |
regional part of brain | 1.07e-11 | 46 |
brain | 2.02e-11 | 47 |
future brain | 2.02e-11 | 47 |
regional part of forebrain | 2.18e-11 | 39 |
forebrain | 2.18e-11 | 39 |
future forebrain | 2.18e-11 | 39 |
anterior neural tube | 4.45e-11 | 40 |
neural tube | 3.31e-10 | 52 |
neural rod | 3.31e-10 | 52 |
future spinal cord | 3.31e-10 | 52 |
neural keel | 3.31e-10 | 52 |
regional part of nervous system | 8.78e-10 | 54 |
pre-chordal neural plate | 7.54e-09 | 49 |
neurectoderm | 4.66e-08 | 64 |
neural plate | 4.66e-08 | 64 |
presumptive neural plate | 4.66e-08 | 64 |
ecto-epithelium | 6.60e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.