FFCP PHASE1:Mm9::chr4:41516824..41516855,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68922|HGNC=|MCL_coexpression_id=0|UniProt=A2ANP4,Q8C0M8|association_with_transcript=0bp_to_NM_175138,uc008sjc.2_5end|description=CAGE_peak_2_at_Dnaic1_5end|id=chr4:41516824..41516855,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.82e-09!73;UBERON:0005743!2.82e-09!73;UBERON:0000073!5.17e-09!75;UBERON:0001016!5.17e-09!75;UBERON:0001049!1.31e-08!52;UBERON:0005068!1.31e-08!52;UBERON:0006241!1.31e-08!52;UBERON:0007135!1.31e-08!52;UBERON:0000955!1.48e-08!50;UBERON:0006238!1.48e-08!50;UBERON:0002616!3.70e-08!49;UBERON:0000033!2.44e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.89e-12,14;UBERON:0000117,6.89e-12,14;UBERON:0000171,6.89e-12,14;UBERON:0000170,6.89e-12,14;UBERON:0005597,6.89e-12,14;UBERON:0000118,6.89e-12,14;UBERON:0005153,2.28e-09,17;UBERON:0005178,2.28e-09,17;UBERON:0005181,2.28e-09,17;UBERON:0002224,2.28e-09,17;UBERON:0000915,2.28e-09,17;UBERON:0008947,2.28e-09,17;UBERON:0003258,2.28e-09,17;UBERON:0005157,1.29e-07,20;UBERON:0001049,7.34e-07,52;UBERON:0005068,7.34e-07,52;UBERON:0006241,7.34e-07,52;UBERON:0007135,7.34e-07,52|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0321428749265,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.75748946187577,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.90149421051854,0,0,0.449949858640699,0,0,1.49800055259202,4.2264013585371,0.103689612308478,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0.510749352340751,0.768032666281217,0,0.182975287204819,0,1.3959149950069,2.25105044012672,0.61119299110724,1.47314292736834,1.28134512719193,0.186399445825301,0.151452386666368,0,0.869593466105033,0,0,0,0,0,1.82577746171277,0,0,0,0.281686839553361,0,0,0,0,0,0,2.16949371466214,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.988779870937496,0.144599356919912,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,1.49790639404823,1.83000241127451,0.753926112677186,1.21677024134594,0.255715457330331,1.45451631191692,2.10913641988085,0,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,2.10289948564127,1.23485534855141,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0.387904974335251,0,0.126473074248515,0.147610147979602,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9327233116623,0,0,0,0.469380496577004,3.1826188913945,4.99891645860629,1.75620283072019,1.57635144106191,1.55025282754142,2.71073106717728,3.27726629431476,3.7990696010497,4.77341893318988,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0.963963949265421,5.10984306749767,0.178065603667255,0,12.8676695918578,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,1.45413491791002,0.356497378384721,0,0,1.03135543248187,2.38307724027652,0.540183282093931,0,0,1.24138163549592,0.356737635204141,1.31639216481697,0.304464949114599,0.469343416127421,1.69465656691056,0,0,0,0.0603129249281559,0,0.164140899745061,0,1.66882771809459,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0.129614973291793,0,34.9489621984198,0.149516546043979,0,0.194451188344048,1.03327858782185,1.18269287843545,0.234714477291508,0,0.734015410979976,19.0851455452545,23.9064905194028,0,0,0,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0,0.735374033800057,0.666740183404846,0.618105171716683,1.60459604795908,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,1.02440243847791,0.689225627467359,0.952587382566147,0.811190281613988,0.578727661391115,0.824171801606613,1.03039244094078,1.71434626192708,0.532427418478012,0.238436189947321,0.872078499793971,1.12931256498397,0.761531471025089,1.28049581010941,1.8414879800649,0.271608227691724,0,0.237270036248348,0.394017929502254,0.818462086339379,0.77468420592983,0.578719832943424,1.74867404556562,0.467863216890817,0,0,0,0|short_description=p2@Dnaic1}} | ||
|EntrezGene=68922 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=A2ANP4,Q8C0M8 | |||
|association_with_transcript=0bp_to_NM_175138,uc008sjc.2_5end | |||
|description=CAGE_peak_2_at_Dnaic1_5end | |||
|id=chr4:41516824..41516855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.82e-09!73;UBERON:0005743!2.82e-09!73;UBERON:0000073!5.17e-09!75;UBERON:0001016!5.17e-09!75;UBERON:0001049!1.31e-08!52;UBERON:0005068!1.31e-08!52;UBERON:0006241!1.31e-08!52;UBERON:0007135!1.31e-08!52;UBERON:0000955!1.48e-08!50;UBERON:0006238!1.48e-08!50;UBERON:0002616!3.70e-08!49;UBERON:0000033!2.44e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.89e-12,14;UBERON:0000117,6.89e-12,14;UBERON:0000171,6.89e-12,14;UBERON:0000170,6.89e-12,14;UBERON:0005597,6.89e-12,14;UBERON:0000118,6.89e-12,14;UBERON:0005153,2.28e-09,17;UBERON:0005178,2.28e-09,17;UBERON:0005181,2.28e-09,17;UBERON:0002224,2.28e-09,17;UBERON:0000915,2.28e-09,17;UBERON:0008947,2.28e-09,17;UBERON:0003258,2.28e-09,17;UBERON:0005157,1.29e-07,20;UBERON:0001049,7.34e-07,52;UBERON:0005068,7.34e-07,52;UBERON:0006241,7.34e-07,52;UBERON:0007135,7.34e-07,52 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0321428749265,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.75748946187577,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.90149421051854,0,0,0.449949858640699,0,0,1.49800055259202,4.2264013585371,0.103689612308478,0,0,0,0,0.122490799214954,0.383381884072945,0,0,0.510749352340751,0.768032666281217,0,0.182975287204819,0,1.3959149950069,2.25105044012672,0.61119299110724,1.47314292736834,1.28134512719193,0.186399445825301,0.151452386666368,0,0.869593466105033,0,0,0,0,0,1.82577746171277,0,0,0,0.281686839553361,0,0,0,0,0,0,2.16949371466214,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.988779870937496,0.144599356919912,0,0,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,1.49790639404823,1.83000241127451,0.753926112677186,1.21677024134594,0.255715457330331,1.45451631191692,2.10913641988085,0,0.622034853050465,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,2.10289948564127,1.23485534855141,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0.387904974335251,0,0.126473074248515,0.147610147979602,0.156998727841375,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9327233116623,0,0,0,0.469380496577004,3.1826188913945,4.99891645860629,1.75620283072019,1.57635144106191,1.55025282754142,2.71073106717728,3.27726629431476,3.7990696010497,4.77341893318988,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0.963963949265421,5.10984306749767,0.178065603667255,0,12.8676695918578,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0,1.45413491791002,0.356497378384721,0,0,1.03135543248187,2.38307724027652,0.540183282093931,0,0,1.24138163549592,0.356737635204141,1.31639216481697,0.304464949114599,0.469343416127421,1.69465656691056,0,0,0,0.0603129249281559,0,0.164140899745061,0,1.66882771809459,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0.129614973291793,0,34.9489621984198,0.149516546043979,0,0.194451188344048,1.03327858782185,1.18269287843545,0.234714477291508,0,0.734015410979976,19.0851455452545,23.9064905194028,0,0,0,0,0.358053391334963,0.198681354781265,0.120195449519969,0,0,0,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0.564751842617067,0,0,0.68741272937475,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.207574695168353,0.399024873401031,0.170733605754134,0.243106717068294,0,0.735374033800057,0.666740183404846,0.618105171716683,1.60459604795908,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,1.02440243847791,0.689225627467359,0.952587382566147,0.811190281613988,0.578727661391115,0.824171801606613,1.03039244094078,1.71434626192708,0.532427418478012,0.238436189947321,0.872078499793971,1.12931256498397,0.761531471025089,1.28049581010941,1.8414879800649,0.271608227691724,0,0.237270036248348,0.394017929502254,0.818462086339379,0.77468420592983,0.578719832943424,1.74867404556562,0.467863216890817,0,0,0,0 | |||
|short_description=p2@Dnaic1 | |||
}} |
Revision as of 04:58, 14 September 2013
Short description: | p2@Dnaic1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dnaic1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_NM_175138, uc008sjc.2_5end |
EntrezGene: | Dnaic1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 6.89e-12 | 14 |
respiratory tube | 6.89e-12 | 14 |
respiration organ | 6.89e-12 | 14 |
pair of lungs | 6.89e-12 | 14 |
lung primordium | 6.89e-12 | 14 |
lung bud | 6.89e-12 | 14 |
epithelial bud | 2.28e-09 | 17 |
thoracic cavity element | 2.28e-09 | 17 |
thoracic segment organ | 2.28e-09 | 17 |
thoracic cavity | 2.28e-09 | 17 |
thoracic segment of trunk | 2.28e-09 | 17 |
respiratory primordium | 2.28e-09 | 17 |
endoderm of foregut | 2.28e-09 | 17 |
epithelial fold | 1.29e-07 | 20 |
neural tube | 7.34e-07 | 52 |
neural rod | 7.34e-07 | 52 |
future spinal cord | 7.34e-07 | 52 |
neural keel | 7.34e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.