FFCP PHASE1:Mm9::chr4:155079069..155079089,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:155079069..155079089,-|id=chr4:155079069..155079089,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,5.87e-07,9;CL:0002251,5.87e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.16e-07!59;UBERON:0004119!5.75e-07!130;UBERON:0000925!5.75e-07!130;UBERON:0006595!5.75e-07!130;UBERON:0001007!7.62e-07!128;UBERON:0001555!7.62e-07!128;UBERON:0007026!7.62e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.24e-09,15;UBERON:0001242,7.98e-08,13;UBERON:0001262,7.98e-08,13;UBERON:0004786,7.98e-08,13;UBERON:0003350,5.87e-07,9;UBERON:0004808,5.87e-07,9;UBERON:0001277,5.87e-07,9|phase1_expression=0.480446541314382,2.44282785347553,1.81999695755814,4.53696316960245,2.50447864973174,1.00727563147134,0.233612640595526,2.58246646883153,1.40788722151667,1.87251621057595,1.36974374580404,1.7549874978974,2.39681021903688,1.92324885321794,0.333109761815663,0.202475267389826,0.699561878128147,0.315462165358238,0.411343300817216,0.84877930359606,0.17008658030214,0.297872853602656,2.61199789138935,1.27993938234725,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,0.635030673459631,1.23012957516914,0,2.02196133825892,2.49351968037739,1.42918549383658,6.27797446105362,5.4693474116666,10.9939986234498,37.6468152339849,7.5135003345429,6.311634589405,0.629484089877886,0.405507724878058,0.550640256485045,0,0.872100625521786,0.659058548203415,0,0.419959264876088,0,1.34226084846189,0,0.672187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0,0.302904773332736,0.226714680320357,2.6087803983151,0,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0.70667914902068,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.45673551887624,0.258937883647172,0.890652834388949,0.867426633830679,0,1.15307748628029,0.301445281105245,0.470354828542819,0.376999773989026,0.741584903203122,0.433798070759735,0,0.647067399789637,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,1.27728527604296,1.43778149407104,2.99951365496704,1.77898317902291,0.149790639404823,0.457500602818626,0.502617408451458,0.521472960576829,0.255715457330331,0.41557608911912,0.324482526135515,1.01839363850316,0.995255764880744,0.758168275301024,0.210441855886474,2.08192708740326,0.689706313300419,0.360124259610698,0.753524089178575,0.748401490664606,1.40925092313335,0.655912071918102,1.03481348295606,0.646703978798527,0.378212160335639,0.703804496655795,1.09597866213787,0.834141747676794,0.348252166522167,1.4404749548556,0.796137067273973,0.702213187313235,3.3455227924913,0.568326998791185,0.207125772535502,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,0,0.817357396570186,0.822799249567402,0.985004784474571,0.486412857275134,0.292399974850665,0,0.671032093801859,0.210289948564127,0.411618449517138,1.32167513193519,2.64450566663544,0.639864751605702,1.16118335930219,1.03093969057675,0.605050573870028,0.667134131534611,0.570676878337677,0.949058123089023,0.823494773620054,0.754005626400808,0.994782360205754,0.779856348476481,0,1.08069024937347,0.995706366271836,1.70701110857774,1.14248512609729,0,0.610953983535943,0.581857461502877,0.49095073923223,0.758838445491087,0.590440591918409,0.784993639206874,0.863780147452604,0.592905254174298,1.33476084572875,0.196558995113203,1.12431056192427,0.405720242777006,0.964708639009667,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,0.964887042726734,0.739012760666419,1.13694847062291,0.977789858652155,1.01847051465113,1.64283173801951,0.670025029767263,1.6663054862021,0.975668239288994,1.41871629695572,0.8858587585951,0.159454768657487,0.655453258862952,0.863424909329478,0.289298117163023,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.468846746368813,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,1.33679204449436,1.13230612315533,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.99358059645788,1.06839362200353,1.46598263418218,1.15479086080775,0,1.94224508923985,1.209294227859,1.13163047853539,1.47650946440386,0.922305443831782,0.258428293168221,1.45413491791002,2.13898427030833,1.8962205476149,0,2.06271086496374,2.04263763452273,1.44048875225048,0.905510786479282,0.857348140126369,1.41872186913819,1.60531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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:155079069..155079089,- | |||
|id=chr4:155079069..155079089,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.87e-07,9;CL:0002251,5.87e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.16e-07!59;UBERON:0004119!5.75e-07!130;UBERON:0000925!5.75e-07!130;UBERON:0006595!5.75e-07!130;UBERON:0001007!7.62e-07!128;UBERON:0001555!7.62e-07!128;UBERON:0007026!7.62e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.24e-09,15;UBERON:0001242,7.98e-08,13;UBERON:0001262,7.98e-08,13;UBERON:0004786,7.98e-08,13;UBERON:0003350,5.87e-07,9;UBERON:0004808,5.87e-07,9;UBERON:0001277,5.87e-07,9 | |||
|phase1_expression=0.480446541314382,2.44282785347553,1.81999695755814,4.53696316960245,2.50447864973174,1.00727563147134,0.233612640595526,2.58246646883153,1.40788722151667,1.87251621057595,1.36974374580404,1.7549874978974,2.39681021903688,1.92324885321794,0.333109761815663,0.202475267389826,0.699561878128147,0.315462165358238,0.411343300817216,0.84877930359606,0.17008658030214,0.297872853602656,2.61199789138935,1.27993938234725,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,0.635030673459631,1.23012957516914,0,2.02196133825892,2.49351968037739,1.42918549383658,6.27797446105362,5.4693474116666,10.9939986234498,37.6468152339849,7.5135003345429,6.311634589405,0.629484089877886,0.405507724878058,0.550640256485045,0,0.872100625521786,0.659058548203415,0,0.419959264876088,0,1.34226084846189,0,0.672187598284928,0.514518872071894,0.286533439938757,0,0,0,0,0.677689064138264,0,0.449949858640699,0.988866362566974,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0,0.302904773332736,0.226714680320357,2.6087803983151,0,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,0.519572009205738,0.70667914902068,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.01104889002957,0.45673551887624,0.258937883647172,0.890652834388949,0.867426633830679,0,1.15307748628029,0.301445281105245,0.470354828542819,0.376999773989026,0.741584903203122,0.433798070759735,0,0.647067399789637,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,1.27728527604296,1.43778149407104,2.99951365496704,1.77898317902291,0.149790639404823,0.457500602818626,0.502617408451458,0.521472960576829,0.255715457330331,0.41557608911912,0.324482526135515,1.01839363850316,0.995255764880744,0.758168275301024,0.210441855886474,2.08192708740326,0.689706313300419,0.360124259610698,0.753524089178575,0.748401490664606,1.40925092313335,0.655912071918102,1.03481348295606,0.646703978798527,0.378212160335639,0.703804496655795,1.09597866213787,0.834141747676794,0.348252166522167,1.4404749548556,0.796137067273973,0.702213187313235,3.3455227924913,0.568326998791185,0.207125772535502,0.469052119962192,0.540186184383045,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,0,0.817357396570186,0.822799249567402,0.985004784474571,0.486412857275134,0.292399974850665,0,0.671032093801859,0.210289948564127,0.411618449517138,1.32167513193519,2.64450566663544,0.639864751605702,1.16118335930219,1.03093969057675,0.605050573870028,0.667134131534611,0.570676878337677,0.949058123089023,0.823494773620054,0.754005626400808,0.994782360205754,0.779856348476481,0,1.08069024937347,0.995706366271836,1.70701110857774,1.14248512609729,0,0.610953983535943,0.581857461502877,0.49095073923223,0.758838445491087,0.590440591918409,0.784993639206874,0.863780147452604,0.592905254174298,1.33476084572875,0.196558995113203,1.12431056192427,0.405720242777006,0.964708639009667,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,0.964887042726734,0.739012760666419,1.13694847062291,0.977789858652155,1.01847051465113,1.64283173801951,0.670025029767263,1.6663054862021,0.975668239288994,1.41871629695572,0.8858587585951,0.159454768657487,0.655453258862952,0.863424909329478,0.289298117163023,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.468846746368813,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,1.33679204449436,1.13230612315533,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,0.99358059645788,1.06839362200353,1.46598263418218,1.15479086080775,0,1.94224508923985,1.209294227859,1.13163047853539,1.47650946440386,0.922305443831782,0.258428293168221,1.45413491791002,2.13898427030833,1.8962205476149,0,2.06271086496374,2.04263763452273,1.44048875225048,0.905510786479282,0.857348140126369,1.41872186913819,1.60531935841864,0.987294123612726,0.913394847343798,0.469343416127421,1.27099242518292,0,0.16488625294148,0,0.482503399425247,0.238744688006273,1.64140899745061,2.33184669303881,0.741701208042039,0.683483523191411,1.23832120777933,0.740778109478847,0.753473828018764,0.546776910884101,0.915112692826091,1.69978429993855,1.53946597556024,0.690999869022119,0,1.10717597753397,1.01659733563424,0.648032044930808,1.88179466413022,0.87345025498471,0.809186078308924,0.826534557253359,0.523511883968059,1.42576470620972,0,0,0.897099276263873,0.66183396182839,0.583353565032143,1.03327858782185,0.675824501963113,1.17357238645754,0.781226309063701,1.46803082195995,0,0.576060012515731,0.316011120628178,0.608175645870493,0.821687657318618,0.129920822977795,1.25318686967237,0.596044064343795,0.7211726971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| |||
|short_description=p@chr4:155079069..155079089,- | |||
}} | |||
Revision as of 04:41, 14 September 2013
| Short description: | p@chr4:155079069..155079089, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr4:155079069..155079089, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 5.87e-07 | 9 |
| epithelial cell of alimentary canal | 5.87e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 8.24e-09 | 15 |
| intestinal mucosa | 7.98e-08 | 13 |
| wall of intestine | 7.98e-08 | 13 |
| gastrointestinal system mucosa | 7.98e-08 | 13 |
| epithelium of mucosa | 5.87e-07 | 9 |
| gastrointestinal system epithelium | 5.87e-07 | 9 |
| intestinal epithelium | 5.87e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
