FFCP PHASE1:Hg19::chr8:17579304..17579321,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57509|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29789|TSSclassifier=N|UniProt=|association_with_transcript=176bp_to_ENST00000518975_5end|coexpression_cluster_id=C11|description=CAGE_peak_40_at_MTUS1_5end|id=chr8:17579304..17579321,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.33e-48!57;UBERON:0005068!4.33e-48!57;UBERON:0006241!4.33e-48!57;UBERON:0007135!4.33e-48!57;UBERON:0000073!6.94e-46!94;UBERON:0001016!6.94e-46!94;UBERON:0005743!1.87e-44!86;UBERON:0003075!1.37e-41!86;UBERON:0007284!1.37e-41!86;UBERON:0001017!1.89e-40!82;UBERON:0002346!1.76e-39!90;UBERON:0002616!1.40e-38!59;UBERON:0000955!6.75e-35!69;UBERON:0006238!6.75e-35!69;UBERON:0002791!2.30e-29!33;UBERON:0001893!1.97e-28!34;UBERON:0002020!2.06e-28!34;UBERON:0003528!2.06e-28!34;UBERON:0004121!2.16e-28!169;UBERON:0000924!1.39e-27!173;UBERON:0006601!1.39e-27!173;UBERON:0007023!2.04e-27!115;UBERON:0000033!5.79e-27!123;UBERON:0002780!1.43e-26!41;UBERON:0001890!1.43e-26!41;UBERON:0006240!1.43e-26!41;UBERON:0003080!7.21e-26!42;UBERON:0003076!8.57e-26!15;UBERON:0003057!8.57e-26!15;UBERON:0000153!1.95e-25!129;UBERON:0007811!1.95e-25!129;UBERON:0003056!3.05e-24!61;UBERON:0002619!9.27e-24!22;UBERON:0001869!1.85e-22!32;UBERON:0000956!9.12e-21!25;UBERON:0000203!9.12e-21!25;UBERON:0004733!1.03e-19!12;UBERON:0002028!1.03e-19!12;UBERON:0007277!1.03e-19!12;UBERON:0004732!3.97e-18!13;UBERON:0001950!2.10e-17!20;UBERON:0001872!2.69e-16!5;UBERON:0000349!3.27e-16!5;UBERON:0002298!4.24e-15!8;UBERON:0002680!4.74e-14!9;UBERON:0001895!4.74e-14!9;UBERON:0010092!4.74e-14!9;UBERON:0004111!4.97e-12!241;UBERON:0001954!4.30e-11!2;UBERON:0003022!4.30e-11!2;UBERON:0002421!4.30e-11!2;UBERON:0002600!4.30e-11!2;UBERON:0000025!2.36e-10!194;UBERON:0000477!3.93e-09!286;UBERON:0002308!4.52e-09!9;UBERON:0000125!4.52e-09!9;UBERON:0002420!5.13e-09!9;UBERON:0007245!5.13e-09!9;UBERON:0010009!5.13e-09!9;UBERON:0010011!5.13e-09!9;UBERON:0000454!5.13e-09!9;UBERON:0002037!1.34e-08!6;UBERON:0006215!1.34e-08!6;UBERON:0000064!2.08e-08!219;UBERON:0002240!7.90e-08!3;UBERON:0000475!8.37e-08!365;UBERON:0006331!1.10e-07!3;UBERON:0001896!1.99e-07!3;UBERON:0005290!1.99e-07!3;UBERON:0010096!1.99e-07!3;UBERON:0000988!2.85e-07!3;UBERON:0000483!3.84e-07!309;UBERON:0000119!5.14e-07!312;UBERON:0009663!5.48e-07!7|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.25e-09;53!UBERON:0002616;8.25e-09;53!UBERON:0001016;9.26e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.52e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,7.62908681585416,7.74054819518572,6.79759523593159,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57509 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29789 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=176bp_to_ENST00000518975_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_40_at_MTUS1_5end | |||
|id=chr8:17579304..17579321,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.33e-48!57;UBERON:0005068!4.33e-48!57;UBERON:0006241!4.33e-48!57;UBERON:0007135!4.33e-48!57;UBERON:0000073!6.94e-46!94;UBERON:0001016!6.94e-46!94;UBERON:0005743!1.87e-44!86;UBERON:0003075!1.37e-41!86;UBERON:0007284!1.37e-41!86;UBERON:0001017!1.89e-40!82;UBERON:0002346!1.76e-39!90;UBERON:0002616!1.40e-38!59;UBERON:0000955!6.75e-35!69;UBERON:0006238!6.75e-35!69;UBERON:0002791!2.30e-29!33;UBERON:0001893!1.97e-28!34;UBERON:0002020!2.06e-28!34;UBERON:0003528!2.06e-28!34;UBERON:0004121!2.16e-28!169;UBERON:0000924!1.39e-27!173;UBERON:0006601!1.39e-27!173;UBERON:0007023!2.04e-27!115;UBERON:0000033!5.79e-27!123;UBERON:0002780!1.43e-26!41;UBERON:0001890!1.43e-26!41;UBERON:0006240!1.43e-26!41;UBERON:0003080!7.21e-26!42;UBERON:0003076!8.57e-26!15;UBERON:0003057!8.57e-26!15;UBERON:0000153!1.95e-25!129;UBERON:0007811!1.95e-25!129;UBERON:0003056!3.05e-24!61;UBERON:0002619!9.27e-24!22;UBERON:0001869!1.85e-22!32;UBERON:0000956!9.12e-21!25;UBERON:0000203!9.12e-21!25;UBERON:0004733!1.03e-19!12;UBERON:0002028!1.03e-19!12;UBERON:0007277!1.03e-19!12;UBERON:0004732!3.97e-18!13;UBERON:0001950!2.10e-17!20;UBERON:0001872!2.69e-16!5;UBERON:0000349!3.27e-16!5;UBERON:0002298!4.24e-15!8;UBERON:0002680!4.74e-14!9;UBERON:0001895!4.74e-14!9;UBERON:0010092!4.74e-14!9;UBERON:0004111!4.97e-12!241;UBERON:0001954!4.30e-11!2;UBERON:0003022!4.30e-11!2;UBERON:0002421!4.30e-11!2;UBERON:0002600!4.30e-11!2;UBERON:0000025!2.36e-10!194;UBERON:0000477!3.93e-09!286;UBERON:0002308!4.52e-09!9;UBERON:0000125!4.52e-09!9;UBERON:0002420!5.13e-09!9;UBERON:0007245!5.13e-09!9;UBERON:0010009!5.13e-09!9;UBERON:0010011!5.13e-09!9;UBERON:0000454!5.13e-09!9;UBERON:0002037!1.34e-08!6;UBERON:0006215!1.34e-08!6;UBERON:0000064!2.08e-08!219;UBERON:0002240!7.90e-08!3;UBERON:0000475!8.37e-08!365;UBERON:0006331!1.10e-07!3;UBERON:0001896!1.99e-07!3;UBERON:0005290!1.99e-07!3;UBERON:0010096!1.99e-07!3;UBERON:0000988!2.85e-07!3;UBERON:0000483!3.84e-07!309;UBERON:0000119!5.14e-07!312;UBERON:0009663!5.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.25e-09;53!UBERON:0002616;8.25e-09;53!UBERON:0001016;9.26e-08;83!UBERON:0000955;1.67e-07;68!UBERON:0001017;8.52e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p40@MTUS1 | |||
}} |
Revision as of 04:22, 14 September 2013
Short description: | p40@MTUS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_MTUS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 176bp_to_ENST00000518975_5end |
EntrezGene: | MTUS1 |
HGNC: | 29789 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.