FFCP PHASE1:Hg19::chr8:16035454..16035468,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7376|TSSclassifier=N|UniProt=P21757|association_with_transcript=28bp_to_AF037351_5end|description=CAGE_peak_10_at_MSR1_5end|id=chr8:16035454..16035468,-|ontology_enrichment_celltype=CL:0002194!3.86e-49!63;CL:0000576!3.86e-49!63;CL:0000040!3.86e-49!63;CL:0000559!3.86e-49!63;CL:0002009!2.37e-47!65;CL:0000839!2.55e-43!70;CL:0000557!1.40e-42!71;CL:0000766!3.55e-39!76;CL:0002057!1.99e-38!42;CL:0000860!2.18e-35!45;CL:0000763!1.31e-23!112;CL:0000049!1.31e-23!112;CL:0002087!3.28e-23!119;CL:0002031!1.96e-20!124;CL:0000738!2.56e-18!140;CL:0000037!3.36e-13!172;CL:0000566!3.36e-13!172;CL:0002032!4.03e-13!165;CL:0000837!4.03e-13!165;CL:0000988!5.56e-12!182;CL:0000235!5.27e-11!10|ontology_enrichment_celltype_v019=CL:0000235;9.87e-59;6!CL:0000473;1.20e-33;39!CL:0000234;1.20e-33;39!CL:0000860;2.60e-14;33!CL:0002057;2.60e-14;33!CL:0000766;3.64e-12;69!CL:0000576;1.27e-08;48!CL:0002593;2.57e-08;2|ontology_enrichment_celltype_v019_2=CL:0000235,1.41e-58,6;CL:0000473,1.82e-34,48;CL:0000234,1.82e-34,48;CL:0002194,2.23e-27,59;CL:0000576,2.23e-27,59;CL:0000040,2.23e-27,59;CL:0000559,2.23e-27,59;CL:0002009,1.83e-26,61;CL:0000839,2.06e-24,66;CL:0000557,4.87e-24,67;CL:0000766,2.54e-22,72;CL:0000763,1.38e-14,108;CL:0000049,1.38e-14,108;CL:0002087,1.23e-13,115;CL:0002031,5.02e-13,120;CL:0000860,6.43e-12,42;CL:0002057,6.43e-12,42;CL:0000738,2.30e-11,136;CL:0002032,2.01e-09,161;CL:0000837,2.01e-09,161;CL:0000037,5.58e-09,168;CL:0000988,1.84e-08,177;CL:0002593,2.31e-08,2|ontology_enrichment_development_v019=CL:0002057;2.40e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!9.32e-37!80;UBERON:0001474!1.51e-33!86;UBERON:0002390!1.96e-30!102;UBERON:0003061!1.96e-30!102;UBERON:0004765!3.45e-27!101;UBERON:0001434!3.45e-27!101;UBERON:0002193!7.59e-27!112;UBERON:0002405!8.41e-26!115;UBERON:0002204!5.20e-16!167;UBERON:0007023!8.39e-14!115;UBERON:0003081!9.08e-13!216;UBERON:0000062!2.13e-08!511;UBERON:0000467!8.12e-07!625;UBERON:0000480!8.81e-07!626|ontology_enrichment_uberon_v019=UBERON:0002171;6.44e-16;1!UBERON:0006518;6.44e-16;1!UBERON:0008949;6.44e-16;1!UBERON:0000101;6.44e-16;1!UBERON:0002167;6.44e-16;1!UBERON:0002456;2.57e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.16e-21,76;UBERON:0001474,1.67e-19,82;UBERON:0004765,1.08e-17,90;UBERON:0002405,4.29e-17,93;UBERON:0002390,3.56e-16,98;UBERON:0003061,3.56e-16,98;UBERON:0002171,6.44e-16,1;UBERON:0006518,6.44e-16,1;UBERON:0008949,6.44e-16,1;UBERON:0000101,6.44e-16,1;UBERON:0002167,6.44e-16,1;UBERON:0001434,7.84e-16,100;UBERON:0002193,1.38e-14,108;UBERON:0002204,6.82e-11,167;UBERON:0003081,9.88e-09,203;UBERON:0002456,2.31e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0.436194716338694,0.377875943688809,0,0.464858073811369,0.822335776043652,0.309706370895104,1.1507695692886,3.58624989140741,0.945928919554341,0,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,0,0.641858054152187,0.639337125799041,0.989553900560148,2.59302754908121,0.426224750532694,0,0.56738522469114,0.622822248995575,2.51248665256743,2.60741459210101,1.3031330682307,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.961086713109252,0,4.14239055347196,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7376 | |||
|TSSclassifier=N | |||
|UniProt=P21757 | |||
|association_with_transcript=28bp_to_AF037351_5end | |||
|description=CAGE_peak_10_at_MSR1_5end | |||
|id=chr8:16035454..16035468,- | |||
|ontology_enrichment_celltype=CL:0002194!3.86e-49!63;CL:0000576!3.86e-49!63;CL:0000040!3.86e-49!63;CL:0000559!3.86e-49!63;CL:0002009!2.37e-47!65;CL:0000839!2.55e-43!70;CL:0000557!1.40e-42!71;CL:0000766!3.55e-39!76;CL:0002057!1.99e-38!42;CL:0000860!2.18e-35!45;CL:0000763!1.31e-23!112;CL:0000049!1.31e-23!112;CL:0002087!3.28e-23!119;CL:0002031!1.96e-20!124;CL:0000738!2.56e-18!140;CL:0000037!3.36e-13!172;CL:0000566!3.36e-13!172;CL:0002032!4.03e-13!165;CL:0000837!4.03e-13!165;CL:0000988!5.56e-12!182;CL:0000235!5.27e-11!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.87e-59;6!CL:0000473;1.20e-33;39!CL:0000234;1.20e-33;39!CL:0000860;2.60e-14;33!CL:0002057;2.60e-14;33!CL:0000766;3.64e-12;69!CL:0000576;1.27e-08;48!CL:0002593;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.41e-58,6;CL:0000473,1.82e-34,48;CL:0000234,1.82e-34,48;CL:0002194,2.23e-27,59;CL:0000576,2.23e-27,59;CL:0000040,2.23e-27,59;CL:0000559,2.23e-27,59;CL:0002009,1.83e-26,61;CL:0000839,2.06e-24,66;CL:0000557,4.87e-24,67;CL:0000766,2.54e-22,72;CL:0000763,1.38e-14,108;CL:0000049,1.38e-14,108;CL:0002087,1.23e-13,115;CL:0002031,5.02e-13,120;CL:0000860,6.43e-12,42;CL:0002057,6.43e-12,42;CL:0000738,2.30e-11,136;CL:0002032,2.01e-09,161;CL:0000837,2.01e-09,161;CL:0000037,5.58e-09,168;CL:0000988,1.84e-08,177;CL:0002593,2.31e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.32e-37!80;UBERON:0001474!1.51e-33!86;UBERON:0002390!1.96e-30!102;UBERON:0003061!1.96e-30!102;UBERON:0004765!3.45e-27!101;UBERON:0001434!3.45e-27!101;UBERON:0002193!7.59e-27!112;UBERON:0002405!8.41e-26!115;UBERON:0002204!5.20e-16!167;UBERON:0007023!8.39e-14!115;UBERON:0003081!9.08e-13!216;UBERON:0000062!2.13e-08!511;UBERON:0000467!8.12e-07!625;UBERON:0000480!8.81e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.44e-16;1!UBERON:0006518;6.44e-16;1!UBERON:0008949;6.44e-16;1!UBERON:0000101;6.44e-16;1!UBERON:0002167;6.44e-16;1!UBERON:0002456;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.16e-21,76;UBERON:0001474,1.67e-19,82;UBERON:0004765,1.08e-17,90;UBERON:0002405,4.29e-17,93;UBERON:0002390,3.56e-16,98;UBERON:0003061,3.56e-16,98;UBERON:0002171,6.44e-16,1;UBERON:0006518,6.44e-16,1;UBERON:0008949,6.44e-16,1;UBERON:0000101,6.44e-16,1;UBERON:0002167,6.44e-16,1;UBERON:0001434,7.84e-16,100;UBERON:0002193,1.38e-14,108;UBERON:0002204,6.82e-11,167;UBERON:0003081,9.88e-09,203;UBERON:0002456,2.31e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0.436194716338694,0.377875943688809,0,0.464858073811369,0.822335776043652,0.309706370895104,1.1507695692886,3.58624989140741,0.945928919554341,0,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,0,0.641858054152187,0.639337125799041,0.989553900560148,2.59302754908121,0.426224750532694,0,0.56738522469114,0.622822248995575,2.51248665256743,2.60741459210101,1.3031330682307,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.669514372325618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.961086713109252,0,4.14239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@MSR1 | |||
}} |
Revision as of 04:18, 14 September 2013
Short description: | p10@MSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_MSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_AF037351_5end |
EntrezGene: | MSR1 |
HGNC: | 7376 |
UniProt: | P21757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.41e-58 | 6 |
defensive cell | 1.82e-34 | 48 |
phagocyte | 1.82e-34 | 48 |
monopoietic cell | 2.23e-27 | 59 |
monocyte | 2.23e-27 | 59 |
monoblast | 2.23e-27 | 59 |
promonocyte | 2.23e-27 | 59 |
macrophage dendritic cell progenitor | 1.83e-26 | 61 |
myeloid lineage restricted progenitor cell | 2.06e-24 | 66 |
granulocyte monocyte progenitor cell | 4.87e-24 | 67 |
myeloid leukocyte | 2.54e-22 | 72 |
myeloid cell | 1.38e-14 | 108 |
common myeloid progenitor | 1.38e-14 | 108 |
nongranular leukocyte | 1.23e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 5.02e-13 | 120 |
classical monocyte | 6.43e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.43e-12 | 42 |
leukocyte | 2.30e-11 | 136 |
hematopoietic oligopotent progenitor cell | 2.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-09 | 161 |
hematopoietic stem cell | 5.58e-09 | 168 |
hematopoietic cell | 1.84e-08 | 177 |
smooth muscle cell of the internal thoracic artery | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.16e-21 | 76 |
bone element | 1.67e-19 | 82 |
skeletal element | 1.08e-17 | 90 |
immune system | 4.29e-17 | 93 |
hematopoietic system | 3.56e-16 | 98 |
blood island | 3.56e-16 | 98 |
lower lobe of right lung | 6.44e-16 | 1 |
right lung lobe | 6.44e-16 | 1 |
lower lobe of lung | 6.44e-16 | 1 |
lobe of lung | 6.44e-16 | 1 |
right lung | 6.44e-16 | 1 |
skeletal system | 7.84e-16 | 100 |
hemolymphoid system | 1.38e-14 | 108 |
musculoskeletal system | 6.82e-11 | 167 |
lateral plate mesoderm | 9.88e-09 | 203 |
internal thoracic artery | 2.31e-08 | 2 |
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