FFCP PHASE1:Hg19::chr8:145889730..145889734,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1248|description=CAGE_peak_at_chr8:145889730..145889734,+|id=chr8:145889730..145889734,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;5.71e-21;1!CL:0002625;5.71e-21;1!CL:0000216;5.71e-21;1!CL:0000767;5.36e-08;3|ontology_enrichment_celltype_v019_2=CL:0000511,3.45e-21,1;CL:0002625,3.45e-21,1;CL:0000216,3.45e-21,1;CL:0000767,5.18e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;5.71e-21;1!UBERON:0001343;5.71e-21;1!UBERON:0004910;5.71e-21;1!UBERON:0004813;5.71e-21;1!UBERON:0004909;3.52e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.45e-21,1;UBERON:0001343,3.45e-21,1;UBERON:0004910,3.45e-21,1;UBERON:0005154,3.45e-21,1;UBERON:0005295,3.45e-21,1;UBERON:0004813,3.45e-21,1;UBERON:0005297,3.45e-21,1;UBERON:0005294,3.45e-21,1;UBERON:0010141,3.45e-21,1;UBERON:0005891,3.45e-21,1;UBERON:0004909,2.73e-11,2;UBERON:0004871,5.98e-11,8|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,2.78669021968937,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0.512321413058201,0,0,0,0,0.752969358170419,0,0.224723484445085,1.22433556948361,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0,0,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0.265059536642971,0,0,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0.790204397959275,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,11.3972424665153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.980160863924127,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0.111443384277478,0,0,2.37571744666111,0,0,0.140669416410513,0.111308705022906,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0.227884111694002,0.46112780877612,0.0897576444097721,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0.485560759068186,0,0,0.91821828489147,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1248 | |||
|description=CAGE_peak_at_chr8:145889730..145889734,+ | |||
|id=chr8:145889730..145889734,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.71e-21;1!CL:0002625;5.71e-21;1!CL:0000216;5.71e-21;1!CL:0000767;5.36e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.45e-21,1;CL:0002625,3.45e-21,1;CL:0000216,3.45e-21,1;CL:0000767,5.18e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.71e-21;1!UBERON:0001343;5.71e-21;1!UBERON:0004910;5.71e-21;1!UBERON:0004813;5.71e-21;1!UBERON:0004909;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.45e-21,1;UBERON:0001343,3.45e-21,1;UBERON:0004910,3.45e-21,1;UBERON:0005154,3.45e-21,1;UBERON:0005295,3.45e-21,1;UBERON:0004813,3.45e-21,1;UBERON:0005297,3.45e-21,1;UBERON:0005294,3.45e-21,1;UBERON:0010141,3.45e-21,1;UBERON:0005891,3.45e-21,1;UBERON:0004909,2.73e-11,2;UBERON:0004871,5.98e-11,8 | |||
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| |||
|short_description=p@chr8:145889730..145889734,+ | |||
}} |
Revision as of 04:16, 14 September 2013
Short description: | p@chr8:145889730..145889734, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:145889730..145889734, + |
Coexpression cluster: | C1248_nasal_Smooth_amniotic_Basophils_CD4_Aortic_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.45e-21 | 1 |
seminiferous tubule epithelial cell | 3.45e-21 | 1 |
Sertoli cell | 3.45e-21 | 1 |
basophil | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.45e-21 | 1 |
seminiferous tubule of testis | 3.45e-21 | 1 |
epithelium of male gonad | 3.45e-21 | 1 |
epithelial cord | 3.45e-21 | 1 |
sex cord | 3.45e-21 | 1 |
seminiferous tubule epithelium | 3.45e-21 | 1 |
testis sex cord | 3.45e-21 | 1 |
genital ridge | 3.45e-21 | 1 |
primitive sex cord of indifferent gonad | 3.45e-21 | 1 |
coelomic epithelium | 3.45e-21 | 1 |
epithelium of gonad | 2.73e-11 | 2 |
somatic layer of lateral plate mesoderm | 5.98e-11 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.