FFCP PHASE1:Mm9::chr4:133228897..133228917,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230801|HGNC=|MCL_coexpression_id=269|UniProt=Q7TPN3,A8WHZ1,A2BH42|association_with_transcript=-335bp_to_ENSMUST00000062118,ENSMUST00000067902,ENSMUST00000151837,NM_001145955,NM_001145956,NM_178698,uc008vdf.2,uc008vdg.2,uc012dmo.1_5end|description=CAGE_peak_3_at_Pigv_5end|id=chr4:133228897..133228917,-|ontology_enrichment_celltype=CL:0000988!3.96e-16!32;CL:0002032!3.96e-16!32;CL:0000037!3.96e-16!32;CL:0000566!3.96e-16!32;CL:0000837!3.96e-16!32;CL:0000838!2.18e-14!12;CL:0000084!2.51e-13!11;CL:0000827!2.51e-13!11;CL:0000542!5.88e-13!13;CL:0000051!5.88e-13!13;CL:0000791!1.39e-11!9;CL:0000789!1.39e-11!9;CL:0002420!1.39e-11!9;CL:0002419!1.39e-11!9;CL:0000790!1.39e-11!9;CL:0002031!3.81e-11!25;CL:0000738!1.10e-10!17;CL:0002087!1.10e-10!17;CL:0000624!1.36e-10!8;CL:0002320!6.74e-10!46;CL:0000134!6.74e-10!46;CL:0000893!2.32e-08!6;CL:0002489!2.32e-08!6;CL:0000898!2.32e-08!6;CL:0000809!2.32e-08!6;CL:0000810!2.32e-08!6;CL:0000895!2.32e-08!6;CL:0000808!2.32e-08!6;CL:0000894!2.32e-08!6;CL:0000806!2.32e-08!6;CL:0000807!2.32e-08!6;CL:0000805!2.32e-08!6;CL:0002425!2.32e-08!6;CL:0002436!2.32e-08!6;CL:0002427!2.32e-08!6;CL:0002428!2.32e-08!6;CL:0002429!2.32e-08!6;CL:0002433!2.32e-08!6;CL:0002431!2.32e-08!6;CL:0002432!2.32e-08!6;CL:0000219!4.72e-08!54;CL:0000063!4.37e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,2.47e-37,32;CL:0002032,2.47e-37,32;CL:0000037,2.47e-37,32;CL:0000837,2.47e-37,32;CL:0000791,9.28e-32,9;CL:0000789,9.28e-32,9;CL:0002420,9.28e-32,9;CL:0002419,9.28e-32,9;CL:0000790,9.28e-32,9;CL:0000838,7.53e-29,12;CL:0000624,9.13e-29,8;CL:0002320,8.97e-28,46;CL:0000134,8.97e-28,46;CL:0000542,1.67e-26,13;CL:0000051,1.67e-26,13;CL:0000084,9.84e-26,11;CL:0000827,9.84e-26,11;CL:0002031,9.91e-26,25;CL:0000738,7.44e-24,17;CL:0002087,7.44e-24,17;CL:0000219,3.97e-23,54;CL:0000893,4.99e-22,6;CL:0002489,4.99e-22,6;CL:0000898,4.99e-22,6;CL:0000809,4.99e-22,6;CL:0000810,4.99e-22,6;CL:0000895,4.99e-22,6;CL:0000808,4.99e-22,6;CL:0000894,4.99e-22,6;CL:0000806,4.99e-22,6;CL:0000807,4.99e-22,6;CL:0000805,4.99e-22,6;CL:0002425,4.99e-22,6;CL:0002436,4.99e-22,6;CL:0002427,4.99e-22,6;CL:0002428,4.99e-22,6;CL:0002429,4.99e-22,6;CL:0002433,4.99e-22,6;CL:0002431,4.99e-22,6;CL:0002432,4.99e-22,6;CL:0000034,4.62e-16,97;CL:0000049,8.19e-14,19;CL:0000723,3.12e-12,91;CL:0000048,3.12e-12,91;CL:0000763,5.29e-10,16;CL:0000557,3.92e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.31e-13!45;UBERON:0003061!4.31e-13!45;UBERON:0002193!5.77e-13!48;UBERON:0004177!1.03e-10!29;UBERON:0002384!6.74e-10!46;UBERON:0002405!5.40e-09!70;UBERON:0002370!8.02e-09!23;UBERON:0000974!8.02e-09!23;UBERON:0004807!8.02e-09!23;UBERON:0005058!8.02e-09!23;UBERON:0003351!8.02e-09!23;UBERON:0009113!8.02e-09!23;UBERON:0003295!8.02e-09!23;UBERON:0009722!8.02e-09!23;UBERON:0005562!8.02e-09!23;UBERON:0007690!8.02e-09!23;UBERON:0006562!2.93e-08!24;UBERON:0003408!2.93e-08!24;UBERON:0001557!2.93e-08!24;UBERON:0001042!2.93e-08!24;UBERON:0008814!2.93e-08!24;UBERON:0009145!2.93e-08!24;UBERON:0003081!6.35e-08!88;UBERON:0000072!7.73e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.97e-28,46;UBERON:0002193,5.63e-14,48;UBERON:0002405,5.63e-14,48;UBERON:0002390,4.98e-13,45;UBERON:0003061,4.98e-13,45;UBERON:0002371,5.29e-10,16;UBERON:0001474,4.78e-07,22;UBERON:0004765,4.78e-07,22;UBERON:0001434,4.78e-07,22|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,2.06597317506522,9.85521055061667,9.83071010552373,3.4243593645101,2.55270908785077,3.25281386869291,1.22388563386596,0,0.202475267389826,0,2.99689057090326,1.91960207048034,2.97072756258621,0.0850432901510698,0.893618560807968,0.522399578277871,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,1.8456086666351,3.62681071005672,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,3.11519323715393,2.99951365496704,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,1.54408744268829,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0.565105371014073,0.410082683163076,0.915112692826091,5.94924504978494,4.47844647435706,5.8043988997858,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0.864090018773596,0,0,0.410843828659309,0.129920822977795,0.358053391334963,0.39736270956253,0,0.590758108698309,0.605798699688886,0.0762068066549998,0.100826185136841,0.584747284438515,0.288635524920988,0,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p3@Pigv}} | ||
|EntrezGene=230801 | |||
|HGNC= | |||
|MCL_coexpression_id=269 | |||
|UniProt=Q7TPN3,A8WHZ1,A2BH42 | |||
|association_with_transcript=-335bp_to_ENSMUST00000062118,ENSMUST00000067902,ENSMUST00000151837,NM_001145955,NM_001145956,NM_178698,uc008vdf.2,uc008vdg.2,uc012dmo.1_5end | |||
|description=CAGE_peak_3_at_Pigv_5end | |||
|id=chr4:133228897..133228917,- | |||
|ontology_enrichment_celltype=CL:0000988!3.96e-16!32;CL:0002032!3.96e-16!32;CL:0000037!3.96e-16!32;CL:0000566!3.96e-16!32;CL:0000837!3.96e-16!32;CL:0000838!2.18e-14!12;CL:0000084!2.51e-13!11;CL:0000827!2.51e-13!11;CL:0000542!5.88e-13!13;CL:0000051!5.88e-13!13;CL:0000791!1.39e-11!9;CL:0000789!1.39e-11!9;CL:0002420!1.39e-11!9;CL:0002419!1.39e-11!9;CL:0000790!1.39e-11!9;CL:0002031!3.81e-11!25;CL:0000738!1.10e-10!17;CL:0002087!1.10e-10!17;CL:0000624!1.36e-10!8;CL:0002320!6.74e-10!46;CL:0000134!6.74e-10!46;CL:0000893!2.32e-08!6;CL:0002489!2.32e-08!6;CL:0000898!2.32e-08!6;CL:0000809!2.32e-08!6;CL:0000810!2.32e-08!6;CL:0000895!2.32e-08!6;CL:0000808!2.32e-08!6;CL:0000894!2.32e-08!6;CL:0000806!2.32e-08!6;CL:0000807!2.32e-08!6;CL:0000805!2.32e-08!6;CL:0002425!2.32e-08!6;CL:0002436!2.32e-08!6;CL:0002427!2.32e-08!6;CL:0002428!2.32e-08!6;CL:0002429!2.32e-08!6;CL:0002433!2.32e-08!6;CL:0002431!2.32e-08!6;CL:0002432!2.32e-08!6;CL:0000219!4.72e-08!54;CL:0000063!4.37e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.47e-37,32;CL:0002032,2.47e-37,32;CL:0000037,2.47e-37,32;CL:0000837,2.47e-37,32;CL:0000791,9.28e-32,9;CL:0000789,9.28e-32,9;CL:0002420,9.28e-32,9;CL:0002419,9.28e-32,9;CL:0000790,9.28e-32,9;CL:0000838,7.53e-29,12;CL:0000624,9.13e-29,8;CL:0002320,8.97e-28,46;CL:0000134,8.97e-28,46;CL:0000542,1.67e-26,13;CL:0000051,1.67e-26,13;CL:0000084,9.84e-26,11;CL:0000827,9.84e-26,11;CL:0002031,9.91e-26,25;CL:0000738,7.44e-24,17;CL:0002087,7.44e-24,17;CL:0000219,3.97e-23,54;CL:0000893,4.99e-22,6;CL:0002489,4.99e-22,6;CL:0000898,4.99e-22,6;CL:0000809,4.99e-22,6;CL:0000810,4.99e-22,6;CL:0000895,4.99e-22,6;CL:0000808,4.99e-22,6;CL:0000894,4.99e-22,6;CL:0000806,4.99e-22,6;CL:0000807,4.99e-22,6;CL:0000805,4.99e-22,6;CL:0002425,4.99e-22,6;CL:0002436,4.99e-22,6;CL:0002427,4.99e-22,6;CL:0002428,4.99e-22,6;CL:0002429,4.99e-22,6;CL:0002433,4.99e-22,6;CL:0002431,4.99e-22,6;CL:0002432,4.99e-22,6;CL:0000034,4.62e-16,97;CL:0000049,8.19e-14,19;CL:0000723,3.12e-12,91;CL:0000048,3.12e-12,91;CL:0000763,5.29e-10,16;CL:0000557,3.92e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.31e-13!45;UBERON:0003061!4.31e-13!45;UBERON:0002193!5.77e-13!48;UBERON:0004177!1.03e-10!29;UBERON:0002384!6.74e-10!46;UBERON:0002405!5.40e-09!70;UBERON:0002370!8.02e-09!23;UBERON:0000974!8.02e-09!23;UBERON:0004807!8.02e-09!23;UBERON:0005058!8.02e-09!23;UBERON:0003351!8.02e-09!23;UBERON:0009113!8.02e-09!23;UBERON:0003295!8.02e-09!23;UBERON:0009722!8.02e-09!23;UBERON:0005562!8.02e-09!23;UBERON:0007690!8.02e-09!23;UBERON:0006562!2.93e-08!24;UBERON:0003408!2.93e-08!24;UBERON:0001557!2.93e-08!24;UBERON:0001042!2.93e-08!24;UBERON:0008814!2.93e-08!24;UBERON:0009145!2.93e-08!24;UBERON:0003081!6.35e-08!88;UBERON:0000072!7.73e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.97e-28,46;UBERON:0002193,5.63e-14,48;UBERON:0002405,5.63e-14,48;UBERON:0002390,4.98e-13,45;UBERON:0003061,4.98e-13,45;UBERON:0002371,5.29e-10,16;UBERON:0001474,4.78e-07,22;UBERON:0004765,4.78e-07,22;UBERON:0001434,4.78e-07,22 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,2.06597317506522,9.85521055061667,9.83071010552373,3.4243593645101,2.55270908785077,3.25281386869291,1.22388563386596,0,0.202475267389826,0,2.99689057090326,1.91960207048034,2.97072756258621,0.0850432901510698,0.893618560807968,0.522399578277871,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,1.8456086666351,3.62681071005672,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,3.11519323715393,2.99951365496704,0.508280908292259,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,1.54408744268829,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0,0,0,0,0,1.02522528478712,0,0,0.565105371014073,0.410082683163076,0.915112692826091,5.94924504978494,4.47844647435706,5.8043988997858,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0.864090018773596,0,0,0.410843828659309,0.129920822977795,0.358053391334963,0.39736270956253,0,0.590758108698309,0.605798699688886,0.0762068066549998,0.100826185136841,0.584747284438515,0.288635524920988,0,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Pigv | |||
}} |
Revision as of 04:02, 14 September 2013
Short description: | p3@Pigv |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pigv_5end |
Coexpression cluster: | MCL_coexpression_mm9:269 |
Association with transcript: | -335bp_to_ENSMUST00000062118, ENSMUST00000067902, ENSMUST00000151837, NM_001145955, NM_001145956, NM_178698, uc008vdf.2, uc008vdg.2, uc012dmo.1_5end |
EntrezGene: | Pigv |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.97e-28 | 46 |
hemolymphoid system | 5.63e-14 | 48 |
immune system | 5.63e-14 | 48 |
hematopoietic system | 4.98e-13 | 45 |
blood island | 4.98e-13 | 45 |
bone marrow | 5.29e-10 | 16 |
bone element | 4.78e-07 | 22 |
skeletal element | 4.78e-07 | 22 |
skeletal system | 4.78e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.