FFCP PHASE1:Mm9::chr4:132595306..132595320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=230793|HGNC=|UniProt=Q6PAL7|association_with_transcript=-87bp_to_ENSMUST00000105914_5end|description=CAGE_peak_6_at_Ahdc1_5end|id=chr4:132595306..132595320,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.28e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.35e-08,18;UBERON:0000948,6.35e-08,18;UBERON:0005498,6.35e-08,18;UBERON:0004140,6.35e-08,18;UBERON:0009881,6.35e-08,18;UBERON:0004141,6.35e-08,18;UBERON:0003084,6.35e-08,18;UBERON:0007005,6.35e-08,18;UBERON:0004139,6.35e-08,18;UBERON:0004291,6.35e-08,18|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.218025156380447,0.878744730937887,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0,0.85960031981627,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0.151143120213571,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0,1.38369298353635,0.904335843315735,0.940709657085638,1.38233250462643,1.48316980640624,0.144599356919912,0,3.07357014900077,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0.407357455401265,0.248813941220186,0,0,0.260240885925407,0.229902104433473,1.0803727788321,0.753524089178575,0.340182495756639,0.512454881139399,1.03071897015702,0.517406741478031,0,0,0.703804496655795,0.876782929710299,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0,0,2.69263504296152,1.17263029990548,1.2604344302271,1.42046841351126,0.787056926989615,1.54267112887378,1.16266972375204,1.3413670069981,0.467061369468678,1.15191894939436,1.80584210487005,2.59420190546738,2.19299981137998,3.07370161407471,1.74468344388483,0.210289948564127,0.308713837137853,0,0.264450566663544,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0.758671603812327,1.02823661348756,0,0.610953983535943,0,0.350679099451593,1.20149420536089,1.32849133181642,0.784993639206874,0.740382983530803,0.296452627087149,0.500535317148282,0.393117990226406,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0,0,0,0.37898282354097,1.14075483509418,1.35796068620151,0.469380496577004,1.67506257441816,2.38043640886014,1.17080188714679,0.630540576424764,0.221464689648775,1.2756381492599,0.491589944147214,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0.504941854408746,0,0,0.215423397732799,0,0.668396022247182,0,0,0,0,0,0.567760340833074,1.06839362200353,0.977321756121456,0.494910368917606,0,0.242780636154981,0.302323556964751,0.754420319023592,1.18120757152309,1.84461088766356,0.258428293168221,1.81766864738753,0.356497378384721,0.632073515871632,1.05418608574999,0,1.02131881726136,0.36012218806262,1.29358683782755,0.857348140126369,2.83744373827638,1.07021290561242,1.15184314421485,0.608929898229199,0.469343416127421,0.847328283455281,1.10264199027481,0.8244312647074,0.322928853391811,0.542816324353403,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.432021363287205,0.627264888043406,0,0.269728692769641,0.247960367176008,0,0.259229946583586,0,6.20062232552609,0.897099276263873,1.32366792365678,1.55560950675238,0.774958940866387,2.02747350588934,2.69921648885234,2.21347454234715,1.04859344425711,4.1069300540421,3.45636007509439,0.316011120628178,1.62180172232131,1.43795340030758,1.16928740680016,1.61124026100733,0.993406773906324,0.600977247599844,0.590758108698309,0.201932899896295,0.304827226619999,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,0.906921534460845,5.10567692760349,1.97370484540847,1.17519231454855,0,0.375364950902364,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0.798049746802062,0.512200817262403,1.45864030240976,0.419226325255965,1.10306105070008,1.33348036680969,0.618105171716683,1.28367683836726,1.26348605881899,1.2673964994512,1.32038438970253,0.936415074698824,1.85672941974121,1.09127391015665,0.952587382566147,2.66533949673168,1.35036454324594,1.23625770240992,0.735994600671987,1.37147700954166,1.4198064492747,1.1921809497366,1.0174249164263,1.78807822789128,1.01537529470012,2.0122077016005,0.789209134313529,1.49384525230448,0,1.18635018124174,1.57607171800902,0.409231043169689,0.619747364743864,1.15743966588685,0.749431733813838,1.16965804222704,1.50409737833809,2.10417165275728,2.20591419119516,1.39120701372253|short_description=p6@Ahdc1}} | ||
|EntrezGene=230793 | |||
|HGNC= | |||
|UniProt=Q6PAL7 | |||
|association_with_transcript=-87bp_to_ENSMUST00000105914_5end | |||
|description=CAGE_peak_6_at_Ahdc1_5end | |||
|id=chr4:132595306..132595320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.28e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.35e-08,18;UBERON:0000948,6.35e-08,18;UBERON:0005498,6.35e-08,18;UBERON:0004140,6.35e-08,18;UBERON:0009881,6.35e-08,18;UBERON:0004141,6.35e-08,18;UBERON:0003084,6.35e-08,18;UBERON:0007005,6.35e-08,18;UBERON:0004139,6.35e-08,18;UBERON:0004291,6.35e-08,18 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0.218025156380447,0.878744730937887,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0,0.85960031981627,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0.151143120213571,4.05810284182349,0,0,0,0,0,0.702222100658759,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0,1.38369298353635,0.904335843315735,0.940709657085638,1.38233250462643,1.48316980640624,0.144599356919912,0,3.07357014900077,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0,0.407357455401265,0.248813941220186,0,0,0.260240885925407,0.229902104433473,1.0803727788321,0.753524089178575,0.340182495756639,0.512454881139399,1.03071897015702,0.517406741478031,0,0,0.703804496655795,0.876782929710299,0.278047249225598,1.0447564995665,1.02891068203972,0.398068533636986,0,0,0,2.69263504296152,1.17263029990548,1.2604344302271,1.42046841351126,0.787056926989615,1.54267112887378,1.16266972375204,1.3413670069981,0.467061369468678,1.15191894939436,1.80584210487005,2.59420190546738,2.19299981137998,3.07370161407471,1.74468344388483,0.210289948564127,0.308713837137853,0,0.264450566663544,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0.758671603812327,1.02823661348756,0,0.610953983535943,0,0.350679099451593,1.20149420536089,1.32849133181642,0.784993639206874,0.740382983530803,0.296452627087149,0.500535317148282,0.393117990226406,0,0,0,0,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0,0,0,0,0,0.37898282354097,1.14075483509418,1.35796068620151,0.469380496577004,1.67506257441816,2.38043640886014,1.17080188714679,0.630540576424764,0.221464689648775,1.2756381492599,0.491589944147214,0.863424909329478,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0.504941854408746,0,0,0.215423397732799,0,0.668396022247182,0,0,0,0,0,0.567760340833074,1.06839362200353,0.977321756121456,0.494910368917606,0,0.242780636154981,0.302323556964751,0.754420319023592,1.18120757152309,1.84461088766356,0.258428293168221,1.81766864738753,0.356497378384721,0.632073515871632,1.05418608574999,0,1.02131881726136,0.36012218806262,1.29358683782755,0.857348140126369,2.83744373827638,1.07021290561242,1.15184314421485,0.608929898229199,0.469343416127421,0.847328283455281,1.10264199027481,0.8244312647074,0.322928853391811,0.542816324353403,0,0.164140899745061,0.291480836629851,0.18542530201051,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,0.406638934253697,0.432021363287205,0.627264888043406,0,0.269728692769641,0.247960367176008,0,0.259229946583586,0,6.20062232552609,0.897099276263873,1.32366792365678,1.55560950675238,0.774958940866387,2.02747350588934,2.69921648885234,2.21347454234715,1.04859344425711,4.1069300540421,3.45636007509439,0.316011120628178,1.62180172232131,1.43795340030758,1.16928740680016,1.61124026100733,0.993406773906324,0.600977247599844,0.590758108698309,0.201932899896295,0.304827226619999,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,0.906921534460845,5.10567692760349,1.97370484540847,1.17519231454855,0,0.375364950902364,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0.798049746802062,0.512200817262403,1.45864030240976,0.419226325255965,1.10306105070008,1.33348036680969,0.618105171716683,1.28367683836726,1.26348605881899,1.2673964994512,1.32038438970253,0.936415074698824,1.85672941974121,1.09127391015665,0.952587382566147,2.66533949673168,1.35036454324594,1.23625770240992,0.735994600671987,1.37147700954166,1.4198064492747,1.1921809497366,1.0174249164263,1.78807822789128,1.01537529470012,2.0122077016005,0.789209134313529,1.49384525230448,0,1.18635018124174,1.57607171800902,0.409231043169689,0.619747364743864,1.15743966588685,0.749431733813838,1.16965804222704,1.50409737833809,2.10417165275728,2.20591419119516,1.39120701372253 | |||
|short_description=p6@Ahdc1 | |||
}} |
Revision as of 03:59, 14 September 2013
Short description: | p6@Ahdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ahdc1_5end |
Coexpression cluster: | NA |
Association with transcript: | -87bp_to_ENSMUST00000105914_5end |
EntrezGene: | Ahdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.35e-08 | 18 |
heart | 6.35e-08 | 18 |
primitive heart tube | 6.35e-08 | 18 |
primary heart field | 6.35e-08 | 18 |
anterior lateral plate mesoderm | 6.35e-08 | 18 |
heart tube | 6.35e-08 | 18 |
heart primordium | 6.35e-08 | 18 |
cardiac mesoderm | 6.35e-08 | 18 |
cardiogenic plate | 6.35e-08 | 18 |
heart rudiment | 6.35e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.