FFCP PHASE1:Mm9::chr4:129013260..129013285,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67106|HGNC=|MCL_coexpression_id=375|UniProt=B2KGA7,Q505B7|association_with_transcript=0bp_to_NM_025970,uc008uwu.1,uc008uwv.1_5end|description=CAGE_peak_3_at_Zbtb8os_5end|id=chr4:129013260..129013285,+|ontology_enrichment_celltype=CL:0000063!6.70e-14!66;CL:0000066!6.89e-09!25;CL:0002320!7.12e-08!46;CL:0000134!7.12e-08!46;CL:0000144!2.58e-07!121;CL:0000012!2.58e-07!121;CL:0000988!6.85e-07!32;CL:0002032!6.85e-07!32;CL:0000037!6.85e-07!32;CL:0000566!6.85e-07!32;CL:0000837!6.85e-07!32;CL:0000219!8.01e-07!54;CL:0000838!8.67e-07!12|ontology_enrichment_celltype_v019_2=CL:0000066,1.82e-13,25;CL:0002320,8.73e-13,46;CL:0000134,8.73e-13,46;CL:0000219,4.72e-12,54;CL:0000988,1.50e-11,32;CL:0002032,1.50e-11,32;CL:0000037,1.50e-11,32;CL:0000837,1.50e-11,32;CL:0000223,4.07e-10,20;CL:0002031,1.83e-09,25;CL:0000034,3.20e-09,97;CL:0000838,4.65e-09,12;CL:0000084,2.96e-08,11;CL:0000827,2.96e-08,11;CL:0000738,4.25e-08,17;CL:0002087,4.25e-08,17;CL:0000542,4.78e-08,13;CL:0000051,4.78e-08,13;CL:0002076,1.77e-07,15;CL:0000723,6.86e-07,91;CL:0000048,6.86e-07,91;CL:0000791,8.64e-07,9;CL:0000789,8.64e-07,9;CL:0002420,8.64e-07,9;CL:0002419,8.64e-07,9;CL:0000790,8.64e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.12e-08!46;UBERON:0000344!3.60e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.73e-13,46;UBERON:0000344,1.02e-09,15;UBERON:0001242,7.11e-08,13;UBERON:0001262,7.11e-08,13;UBERON:0004786,7.11e-08,13;UBERON:0000485,2.52e-07,11|phase1_expression=2.24208385946712,4.88565570695105,2.27499619694768,5.74682001482977,1.50268718983904,3.02182689441402,7.70921713965235,5.68142623142936,2.39340827657833,1.17032263160997,7.53359060192222,4.06838010876216,9.75844160607873,5.59490575481583,0,4.25198061518635,2.09868563438444,10.2525203741427,8.91243818437302,9.33657233955666,0.765389611359628,2.6808556824239,14.1047886135025,16.4792195477209,13.3057383018959,9.18771142584032,6.8921919385452,5.38678081714723,15.3918969759663,6.5527833737582,5.09980174507201,0,0,0,1.1554064790051,4.48833542467929,2.85837098767317,2.51118978442145,5.4693474116666,5.75876118371178,5.29408339227913,4.09827290975067,4.36959317728038,1.38486499773135,1.01376931219515,0.917733760808408,2.34717403304412,0.218025156380447,0.659058548203415,0.194429899074283,0,0,6.20795642413625,1.45072428402269,4.03312558970957,0.514518872071894,0.573066879877513,0,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.414758449233911,0.135005938331691,0,0,0.220868540951614,0,0.287536413054709,0,0,0.127687338085188,1.22885226604995,0.395658863190582,0,0.52091337055676,0,1.68828783009504,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,4.69502398665741,5.66786700800891,2.02905142091174,16.3480536626463,2.03991400112325,4.31762553310254,1.94932925234301,4.92829575807069,0.983110940922263,0.681721290312231,5.71529210126311,4.59341446863442,1.97180787687353,3.84979432242953,0,0,5.84525810730278,6.58735650235256,5.05524445014783,1.7127581957859,0,0.742210695324124,1.04091196059682,1.21786191324856,0.922461989024234,1.50722640552623,1.29347577849275,0.753999547978053,0.988779870937496,0.144599356919912,0,0.161766849947409,0.441683036920787,1.93950101254089,0,0.292780797011547,0,1.27728527604296,2.99537811264801,8.39863823390771,3.55796635804581,0.748953197024114,0.457500602818626,0,0.173824320192276,0.511430914660661,0.83115217823824,0.648965052271031,0.305518091550949,0.497627882440372,1.0108910337347,0.631325567659422,0.780722657776222,0,0.540186389416048,0.452114453507145,0.544291993210623,0.896796041993948,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0,0,1.39023624612799,0,0.61734640922383,0.59710280045548,6.31991868581911,7.46308930632674,0.852490498186778,0.621377317606506,0.703578179943289,1.2604344302271,0.23674473558521,0,0.154267112887378,0.465067889500816,0.536546802799238,0.583826711835847,0.16455984991348,0,0.324275238183423,0,0.878200461164203,0.402619256281115,0.630869845692382,0.102904612379284,0.330418782983798,1.32225283331772,0.426576501070468,0.232236671860439,0.644337306610467,0.80673409849337,0.889512175379481,0.951128130562796,0,0.823494773620054,2.01068167040216,0.994782360205754,0.58489226135736,2.69645822596266,1.29682829924817,1.1948476395262,0.189667900953082,0.685491075658373,0,1.01825663922657,0.775809948670503,0.561086559122548,0.948548056863859,0.738050739898011,1.255989822731,0.740382983530803,2.37162101669719,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,1.11642284300551,0.936113019343682,0,1.07638448113147,0.482443521363367,0.923765950833023,0.947457058852424,0.488894929326078,1.01847051465113,1.17345124144251,0.670025029767263,0.238043640886014,0,0.157635144106191,0.8858587585951,0.318909537314974,0.81931657357869,0.518054945597687,0.433947175744535,10.555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| ||
|EntrezGene=67106 | |||
|HGNC= | |||
|MCL_coexpression_id=375 | |||
|UniProt=B2KGA7,Q505B7 | |||
|association_with_transcript=0bp_to_NM_025970,uc008uwu.1,uc008uwv.1_5end | |||
|description=CAGE_peak_3_at_Zbtb8os_5end | |||
|id=chr4:129013260..129013285,+ | |||
|ontology_enrichment_celltype=CL:0000063!6.70e-14!66;CL:0000066!6.89e-09!25;CL:0002320!7.12e-08!46;CL:0000134!7.12e-08!46;CL:0000144!2.58e-07!121;CL:0000012!2.58e-07!121;CL:0000988!6.85e-07!32;CL:0002032!6.85e-07!32;CL:0000037!6.85e-07!32;CL:0000566!6.85e-07!32;CL:0000837!6.85e-07!32;CL:0000219!8.01e-07!54;CL:0000838!8.67e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.82e-13,25;CL:0002320,8.73e-13,46;CL:0000134,8.73e-13,46;CL:0000219,4.72e-12,54;CL:0000988,1.50e-11,32;CL:0002032,1.50e-11,32;CL:0000037,1.50e-11,32;CL:0000837,1.50e-11,32;CL:0000223,4.07e-10,20;CL:0002031,1.83e-09,25;CL:0000034,3.20e-09,97;CL:0000838,4.65e-09,12;CL:0000084,2.96e-08,11;CL:0000827,2.96e-08,11;CL:0000738,4.25e-08,17;CL:0002087,4.25e-08,17;CL:0000542,4.78e-08,13;CL:0000051,4.78e-08,13;CL:0002076,1.77e-07,15;CL:0000723,6.86e-07,91;CL:0000048,6.86e-07,91;CL:0000791,8.64e-07,9;CL:0000789,8.64e-07,9;CL:0002420,8.64e-07,9;CL:0002419,8.64e-07,9;CL:0000790,8.64e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.12e-08!46;UBERON:0000344!3.60e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.73e-13,46;UBERON:0000344,1.02e-09,15;UBERON:0001242,7.11e-08,13;UBERON:0001262,7.11e-08,13;UBERON:0004786,7.11e-08,13;UBERON:0000485,2.52e-07,11 | |||
|phase1_expression=2.24208385946712,4.88565570695105,2.27499619694768,5.74682001482977,1.50268718983904,3.02182689441402,7.70921713965235,5.68142623142936,2.39340827657833,1.17032263160997,7.53359060192222,4.06838010876216,9.75844160607873,5.59490575481583,0,4.25198061518635,2.09868563438444,10.2525203741427,8.91243818437302,9.33657233955666,0.765389611359628,2.6808556824239,14.1047886135025,16.4792195477209,13.3057383018959,9.18771142584032,6.8921919385452,5.38678081714723,15.3918969759663,6.5527833737582,5.09980174507201,0,0,0,1.1554064790051,4.48833542467929,2.85837098767317,2.51118978442145,5.4693474116666,5.75876118371178,5.29408339227913,4.09827290975067,4.36959317728038,1.38486499773135,1.01376931219515,0.917733760808408,2.34717403304412,0.218025156380447,0.659058548203415,0.194429899074283,0,0,6.20795642413625,1.45072428402269,4.03312558970957,0.514518872071894,0.573066879877513,0,0.606949382578793,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.414758449233911,0.135005938331691,0,0,0.220868540951614,0,0.287536413054709,0,0,0.127687338085188,1.22885226604995,0.395658863190582,0,0.52091337055676,0,1.68828783009504,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,4.69502398665741,5.66786700800891,2.02905142091174,16.3480536626463,2.03991400112325,4.31762553310254,1.94932925234301,4.92829575807069,0.983110940922263,0.681721290312231,5.71529210126311,4.59341446863442,1.97180787687353,3.84979432242953,0,0,5.84525810730278,6.58735650235256,5.05524445014783,1.7127581957859,0,0.742210695324124,1.04091196059682,1.21786191324856,0.922461989024234,1.50722640552623,1.29347577849275,0.753999547978053,0.988779870937496,0.144599356919912,0,0.161766849947409,0.441683036920787,1.93950101254089,0,0.292780797011547,0,1.27728527604296,2.99537811264801,8.39863823390771,3.55796635804581,0.748953197024114,0.457500602818626,0,0.173824320192276,0.511430914660661,0.83115217823824,0.648965052271031,0.305518091550949,0.497627882440372,1.0108910337347,0.631325567659422,0.780722657776222,0,0.540186389416048,0.452114453507145,0.544291993210623,0.896796041993948,0.937017245597288,0.258703370739016,0.431135985865684,0.567318240503458,0,0,1.39023624612799,0,0.61734640922383,0.59710280045548,6.31991868581911,7.46308930632674,0.852490498186778,0.621377317606506,0.703578179943289,1.2604344302271,0.23674473558521,0,0.154267112887378,0.465067889500816,0.536546802799238,0.583826711835847,0.16455984991348,0,0.324275238183423,0,0.878200461164203,0.402619256281115,0.630869845692382,0.102904612379284,0.330418782983798,1.32225283331772,0.426576501070468,0.232236671860439,0.644337306610467,0.80673409849337,0.889512175379481,0.951128130562796,0,0.823494773620054,2.01068167040216,0.994782360205754,0.58489226135736,2.69645822596266,1.29682829924817,1.1948476395262,0.189667900953082,0.685491075658373,0,1.01825663922657,0.775809948670503,0.561086559122548,0.948548056863859,0.738050739898011,1.255989822731,0.740382983530803,2.37162101669719,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,1.11642284300551,0.936113019343682,0,1.07638448113147,0.482443521363367,0.923765950833023,0.947457058852424,0.488894929326078,1.01847051465113,1.17345124144251,0.670025029767263,0.238043640886014,0,0.157635144106191,0.8858587585951,0.318909537314974,0.81931657357869,0.518054945597687,0.433947175744535,10.5553898757491,10.3342079925555,0,0.551873492609465,1.12385412991454,0.937693492737625,1.14754461763673,0.252470927204373,0,0,1.50796378412959,0.716906393857656,0.891194696329576,0.566153061577665,0,0.876767573733936,1.58115111178609,0.321321316421807,0.425820255624806,0.178065603667255,0.162886959353576,0.824850614862677,0,1.69946445308487,0.906970670894253,0.754420319023592,0,0.307435147943927,0.775284879504663,0.727067458955011,1.42598951353889,0.948110273807448,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.643011105094777,1.06404140185364,0.178368817602071,0.329098041204242,0,0.704015124191131,0.847328283455281,1.32317038832977,0.16488625294148,0.161464426695906,0.301564624640779,0.238744688006273,0.984845398470368,1.1659233465194,0.741701208042039,0.512612642393558,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0.686334519619568,2.20971958992012,1.81936888020755,1.93479963326193,2.86401185404534,0.632671987162271,0.406638934253697,0.86404272657441,0.418176592028937,1.31017538247707,0.809186078308924,0.578574190077352,1.04702376793612,2.07383957266869,0.621339313086926,0.56369293868419,0.448549638131936,0.330916980914195,0.583353565032143,0.904118764344118,0.675824501963113,0.234714477291508,0.911430693907651,1.46803082195995,1.44950472495604,0.288030006257865,0,0.608175645870493,1.33524244314275,1.68897069871134,0.179026695667481,0.79472541912506,0.480781798079875,0.886137163047463,1.11063094942962,0.990688486514998,0.604957110821043,0.584747284438515,0.67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| |||
|short_description=p3@Zbtb8os | |||
}} | |||
Revision as of 03:51, 14 September 2013
| Short description: | p3@Zbtb8os |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Zbtb8os_5end |
| Coexpression cluster: | MCL_coexpression_mm9:375 |
| Association with transcript: | 0bp_to_NM_025970, uc008uwu.1, uc008uwv.1_5end |
| EntrezGene: | Zbtb8os |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.82e-13 | 25 |
| connective tissue cell | 8.73e-13 | 46 |
| mesenchymal cell | 8.73e-13 | 46 |
| motile cell | 4.72e-12 | 54 |
| hematopoietic cell | 1.50e-11 | 32 |
| hematopoietic oligopotent progenitor cell | 1.50e-11 | 32 |
| hematopoietic stem cell | 1.50e-11 | 32 |
| hematopoietic multipotent progenitor cell | 1.50e-11 | 32 |
| endodermal cell | 4.07e-10 | 20 |
| hematopoietic lineage restricted progenitor cell | 1.83e-09 | 25 |
| stem cell | 3.20e-09 | 97 |
| lymphoid lineage restricted progenitor cell | 4.65e-09 | 12 |
| T cell | 2.96e-08 | 11 |
| pro-T cell | 2.96e-08 | 11 |
| leukocyte | 4.25e-08 | 17 |
| nongranular leukocyte | 4.25e-08 | 17 |
| lymphocyte | 4.78e-08 | 13 |
| common lymphoid progenitor | 4.78e-08 | 13 |
| endo-epithelial cell | 1.77e-07 | 15 |
| somatic stem cell | 6.86e-07 | 91 |
| multi fate stem cell | 6.86e-07 | 91 |
| mature alpha-beta T cell | 8.64e-07 | 9 |
| alpha-beta T cell | 8.64e-07 | 9 |
| immature T cell | 8.64e-07 | 9 |
| mature T cell | 8.64e-07 | 9 |
| immature alpha-beta T cell | 8.64e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 8.73e-13 | 46 |
| mucosa | 1.02e-09 | 15 |
| intestinal mucosa | 7.11e-08 | 13 |
| wall of intestine | 7.11e-08 | 13 |
| gastrointestinal system mucosa | 7.11e-08 | 13 |
| simple columnar epithelium | 2.52e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
