FFCP PHASE1:Mm9::chr4:115894226..115894237,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18710|HGNC=|MCL_coexpression_id=1355|UniProt=B1AUF8|association_with_transcript=3bp_to_ENSMUST00000147292_5end|description=CAGE_peak_3_at_Pik3r3_5end|id=chr4:115894226..115894237,+|ontology_enrichment_celltype=CL:0000540!7.77e-11!33;CL:0000047!7.77e-11!33;CL:0000031!7.77e-11!33;CL:0000404!7.77e-11!33;CL:0000117!1.27e-09!23;CL:0000337!1.27e-09!23;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0002319!5.36e-08!43;CL:0000221!9.91e-08!44;CL:0000133!9.91e-08!44|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-14,33;CL:0000047,7.32e-14,33;CL:0000031,7.32e-14,33;CL:0000404,7.32e-14,33;CL:0000117,1.59e-13,23;CL:0000337,1.59e-13,23;CL:0000393,3.65e-11,39;CL:0000211,3.65e-11,39;CL:0002319,2.43e-09,43;CL:0000221,6.21e-09,44;CL:0000133,6.21e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-20!71;UBERON:0003075!1.73e-20!71;UBERON:0007284!1.73e-20!71;UBERON:0004121!5.11e-20!102;UBERON:0000924!5.11e-20!102;UBERON:0006601!5.11e-20!102;UBERON:0001017!5.22e-19!73;UBERON:0005743!5.22e-19!73;UBERON:0000073!8.36e-19!75;UBERON:0001016!8.36e-19!75;UBERON:0001049!1.60e-18!52;UBERON:0005068!1.60e-18!52;UBERON:0006241!1.60e-18!52;UBERON:0007135!1.60e-18!52;UBERON:0000033!7.43e-18!63;UBERON:0003056!4.58e-17!49;UBERON:0002020!1.07e-15!34;UBERON:0002616!4.72e-15!49;UBERON:0000955!7.23e-15!50;UBERON:0006238!7.23e-15!50;UBERON:0003080!2.84e-14!40;UBERON:0002780!6.45e-14!39;UBERON:0001890!6.45e-14!39;UBERON:0006240!6.45e-14!39;UBERON:0007811!1.09e-13!86;UBERON:0000153!2.61e-13!94;UBERON:0002791!3.50e-13!29;UBERON:0003528!3.50e-13!29;UBERON:0001893!3.50e-13!29;UBERON:0000956!2.11e-09!21;UBERON:0001869!2.11e-09!21;UBERON:0000203!2.11e-09!21;UBERON:0002619!4.71e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.49e-29,64;UBERON:0003075,6.49e-29,64;UBERON:0007284,6.49e-29,64;UBERON:0004121,9.25e-26,95;UBERON:0000924,9.25e-26,95;UBERON:0006601,9.25e-26,95;UBERON:0010371,5.19e-25,73;UBERON:0001049,7.92e-24,52;UBERON:0005068,7.92e-24,52;UBERON:0006241,7.92e-24,52;UBERON:0007135,7.92e-24,52;UBERON:0001017,1.27e-23,73;UBERON:0001016,1.70e-22,75;UBERON:0000073,2.09e-22,54;UBERON:0003056,1.13e-21,49;UBERON:0002020,5.15e-21,34;UBERON:0002616,3.44e-19,46;UBERON:0000955,1.68e-18,47;UBERON:0006238,1.68e-18,47;UBERON:0003528,3.53e-17,29;UBERON:0002791,3.53e-17,29;UBERON:0001893,3.53e-17,29;UBERON:0003080,3.54e-17,40;UBERON:0002780,1.22e-16,39;UBERON:0001890,1.22e-16,39;UBERON:0006240,1.22e-16,39;UBERON:0010314,2.28e-16,92;UBERON:0000956,2.26e-12,21;UBERON:0001869,2.26e-12,21;UBERON:0000203,2.26e-12,21;UBERON:0002619,2.79e-10,17;UBERON:0002021,2.94e-08,10;UBERON:0000411,2.94e-08,10;UBERON:0001950,2.94e-08,10;UBERON:0004111,1.04e-07,122;UBERON:0003076,2.69e-07,12;UBERON:0003057,2.69e-07,12;UBERON:0000025,3.74e-07,114|phase1_expression=0.480446541314382,0.697950815278722,1.36499771816861,0.60492842261366,0.500895729946347,1.00727563147134,1.16806320297763,0.774739940649458,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,0.856003649656029,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,1.02051948181284,0.198581902401771,0,0.159992422793407,0.68822784320151,1.14846392823004,0.430761996159075,0.861884930743556,0.190023419456374,0.252030129759931,0.886922042621219,1.27006134691926,0.61506478758457,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.755380907853464,0.405507724878058,1.10128051297009,0,0.65407546914134,0.659058548203415,0.777719596297134,0,0,0.167782606057736,0,0.672187598284928,0,0.85960031981627,0.515672092277442,4.04632921719196,0.528990979272033,3.1691570175309,0,0,0.449949858640699,0,0,0.599200221036809,1.15265491596466,1.65903379693564,1.4850653216486,1.26194976810829,1.99955689082663,1.10434270475807,2.44981598429908,2.58782771749238,3.67687514644008,0,2.68143409978894,0.921639199537461,4.08847491963601,4.02545631850602,5.2091337055676,1.3959149950069,2.25105044012672,1.68078072554491,3.83017161115768,3.27454865837937,2.60959224155421,0.454357159999104,0.906858721281426,2.31891590961342,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,1.28326477414318,0,14.2213340630666,0.432982082022428,0.253359865475099,0.505524445014783,0.34255163915718,0,0.890652834388949,0.867426633830679,0.304465478312141,0.922461989024234,0.301445281105245,0.705532242814229,0.376999773989026,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,4.39171195517321,4.81727425670947,0,0,0,0,1.49790639404823,0.915001205637253,3.01570445070875,1.73824320192276,2.55715457330331,1.87009240103604,1.62241263067758,0.101839363850316,0.248813941220186,1.51633655060205,2.52530227063769,1.56144531555244,0.229902104433473,1.26043490863744,1.50704817835715,2.31324097114515,2.8185018462667,1.68663104207512,1.55222022443409,0.862271971731369,1.32374256117473,1.23165786914764,0.219195732427575,1.66828349535359,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.2071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| ||
|EntrezGene=18710 | |||
|HGNC= | |||
|MCL_coexpression_id=1355 | |||
|UniProt=B1AUF8 | |||
|association_with_transcript=3bp_to_ENSMUST00000147292_5end | |||
|description=CAGE_peak_3_at_Pik3r3_5end | |||
|id=chr4:115894226..115894237,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.77e-11!33;CL:0000047!7.77e-11!33;CL:0000031!7.77e-11!33;CL:0000404!7.77e-11!33;CL:0000117!1.27e-09!23;CL:0000337!1.27e-09!23;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0002319!5.36e-08!43;CL:0000221!9.91e-08!44;CL:0000133!9.91e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.32e-14,33;CL:0000047,7.32e-14,33;CL:0000031,7.32e-14,33;CL:0000404,7.32e-14,33;CL:0000117,1.59e-13,23;CL:0000337,1.59e-13,23;CL:0000393,3.65e-11,39;CL:0000211,3.65e-11,39;CL:0002319,2.43e-09,43;CL:0000221,6.21e-09,44;CL:0000133,6.21e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-20!71;UBERON:0003075!1.73e-20!71;UBERON:0007284!1.73e-20!71;UBERON:0004121!5.11e-20!102;UBERON:0000924!5.11e-20!102;UBERON:0006601!5.11e-20!102;UBERON:0001017!5.22e-19!73;UBERON:0005743!5.22e-19!73;UBERON:0000073!8.36e-19!75;UBERON:0001016!8.36e-19!75;UBERON:0001049!1.60e-18!52;UBERON:0005068!1.60e-18!52;UBERON:0006241!1.60e-18!52;UBERON:0007135!1.60e-18!52;UBERON:0000033!7.43e-18!63;UBERON:0003056!4.58e-17!49;UBERON:0002020!1.07e-15!34;UBERON:0002616!4.72e-15!49;UBERON:0000955!7.23e-15!50;UBERON:0006238!7.23e-15!50;UBERON:0003080!2.84e-14!40;UBERON:0002780!6.45e-14!39;UBERON:0001890!6.45e-14!39;UBERON:0006240!6.45e-14!39;UBERON:0007811!1.09e-13!86;UBERON:0000153!2.61e-13!94;UBERON:0002791!3.50e-13!29;UBERON:0003528!3.50e-13!29;UBERON:0001893!3.50e-13!29;UBERON:0000956!2.11e-09!21;UBERON:0001869!2.11e-09!21;UBERON:0000203!2.11e-09!21;UBERON:0002619!4.71e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.49e-29,64;UBERON:0003075,6.49e-29,64;UBERON:0007284,6.49e-29,64;UBERON:0004121,9.25e-26,95;UBERON:0000924,9.25e-26,95;UBERON:0006601,9.25e-26,95;UBERON:0010371,5.19e-25,73;UBERON:0001049,7.92e-24,52;UBERON:0005068,7.92e-24,52;UBERON:0006241,7.92e-24,52;UBERON:0007135,7.92e-24,52;UBERON:0001017,1.27e-23,73;UBERON:0001016,1.70e-22,75;UBERON:0000073,2.09e-22,54;UBERON:0003056,1.13e-21,49;UBERON:0002020,5.15e-21,34;UBERON:0002616,3.44e-19,46;UBERON:0000955,1.68e-18,47;UBERON:0006238,1.68e-18,47;UBERON:0003528,3.53e-17,29;UBERON:0002791,3.53e-17,29;UBERON:0001893,3.53e-17,29;UBERON:0003080,3.54e-17,40;UBERON:0002780,1.22e-16,39;UBERON:0001890,1.22e-16,39;UBERON:0006240,1.22e-16,39;UBERON:0010314,2.28e-16,92;UBERON:0000956,2.26e-12,21;UBERON:0001869,2.26e-12,21;UBERON:0000203,2.26e-12,21;UBERON:0002619,2.79e-10,17;UBERON:0002021,2.94e-08,10;UBERON:0000411,2.94e-08,10;UBERON:0001950,2.94e-08,10;UBERON:0004111,1.04e-07,122;UBERON:0003076,2.69e-07,12;UBERON:0003057,2.69e-07,12;UBERON:0000025,3.74e-07,114 | |||
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| |||
|short_description=p3@Pik3r3 | |||
}} |
Revision as of 03:31, 14 September 2013
Short description: | p3@Pik3r3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pik3r3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1355 |
Association with transcript: | 3bp_to_ENSMUST00000147292_5end |
EntrezGene: | Pik3r3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.32e-14 | 33 |
neuronal stem cell | 7.32e-14 | 33 |
neuroblast | 7.32e-14 | 33 |
electrically signaling cell | 7.32e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.59e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-13 | 23 |
electrically responsive cell | 3.65e-11 | 39 |
electrically active cell | 3.65e-11 | 39 |
neural cell | 2.43e-09 | 43 |
ectodermal cell | 6.21e-09 | 44 |
neurectodermal cell | 6.21e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.