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FFCP PHASE1:Mm9::chr4:109079699..109079724,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=230603|HGNC=|UniProt=A2ACP1|association_with_transcript=0bp_to_ENSMUST00000106619,NM_153392,uc008uci.2,uc008ucj.2_5end|description=CAGE_peak_2_at_Ttc39a_5end|id=chr4:109079699..109079724,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.04e-12!130;UBERON:0000925!5.04e-12!130;UBERON:0006595!5.04e-12!130;UBERON:0005409!8.31e-12!59;UBERON:0001007!3.41e-11!128;UBERON:0001555!3.41e-11!128;UBERON:0007026!3.41e-11!128;UBERON:0004921!2.08e-10!126;UBERON:0004185!2.08e-10!126;UBERON:0000160!4.22e-10!43;UBERON:0007023!4.75e-09!51;UBERON:0000466!5.53e-08!79;UBERON:0002108!1.48e-07!16;UBERON:0000922!7.84e-07!328;UBERON:0001045!8.17e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.08e-09,51;UBERON:0004119,1.03e-07,118;UBERON:0000925,1.03e-07,118;UBERON:0006595,1.03e-07,118;UBERON:0001264,5.14e-07,12;UBERON:0001007,5.22e-07,116;UBERON:0001555,5.22e-07,116;UBERON:0007026,5.22e-07,116;UBERON:0005409,7.71e-07,47|phase1_expression=0.320297694209588,5.58360652222978,9.55498402718026,0,0,9.73699777088961,10.5125688267987,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0.699561878128147,0.315462165358238,0.137114433605739,0.84877930359606,1.53077922271926,0,0.522399578277871,3.67982572424835,4.81759490241057,8.03924749761028,12.0613358924541,10.9890328669803,5.70070258369122,3.78045194639896,10.4213340007993,0.635030673459631,0,0,0.288851619751275,0.997407872150954,0.408338712524738,0,0.7813353445238,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,2.34717403304412,0.872100625521786,0.878744730937887,0.388859798148567,0.839918529752175,1.43752564364972,0,0,0,0.257259436035947,5.44413535883638,0,0.404632921719196,1.05798195854407,0,0.338844532069132,0,0.899899717281399,0,0,1.49800055259202,1.15265491596466,0.103689612308478,0,0,3.71346279724945,2.20868540951614,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,2.042997409363,1.99688493233117,0.395658863190582,0.182975287204819,0,3.35019598801657,2.25105044012672,2.13917546887534,1.47314292736834,1.99320353118744,1.3047961207771,0.075726193333184,0,2.6087803983151,0,0.679971333707751,0.539703191637817,1.29955283489534,2.24013443548668,1.26399978118577,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,1.5154372870785,1.52015919285059,2.52762222507392,1.82694207550496,2.58937883647172,0.890652834388949,1.21439728736295,1.52232739156071,0.922461989024234,0.452167921657868,1.52865319276416,1.75933227861546,6.92145909656247,0.144599356919912,0,0.808834249737046,1.10420759230197,0,3.72783522436244,2.34224637609238,3.35114730901528,2.04365644166873,0,0,0,3.74476598512057,1.83000241127451,0.628271760564322,0.695297280769106,0,0.62336413367868,1.1356888414743,1.52759045775474,0.995255764880744,5.30717792710717,4.62972082950243,0,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.640568601424249,0.562210347358373,2.32833033665114,0.862271971731369,0.756424320671277,1.05570674498369,1.53437012699302,0.278047249225598,0,0.61734640922383,1.19420560091096,0,0,0,2.27838349789052,1.64168241986767,1.80062061461015,2.84093682702252,2.36117078096885,1.3884040159864,0.465067889500816,2.14618721119695,0.583826711835847,0.658239399653922,0.985004784474571,0.810688095458557,0.292399974850665,0.219550115291051,0.536825675041487,0.210289948564127,0.205809224758569,1.32167513193519,1.85115396664481,0.853153002140936,1.16118335930219,2.31961430379768,1.81515172161008,3.33567065767305,3.42406127002606,2.37264530772256,3.12928013975621,1.50801125280162,3.38226002469956,3.11942539390592,1.79763881730844,5.61958929674205,4.77939055810481,1.13800740571849,1.25673363870702,0,0.610953983535943,0.387904974335251,0.350679099451593,0.505892296994058,0,0,0.123397163921801,1.1858105083486,2.50267658574141,2.16214894624523,3.59779379815766,4.46292267054706,4.10001171579109,3.31013607315846,0.863088412352432,1.78348749452539,1.09824565275233,2.87536413054709,0.372140947668503,1.24815069245824,2.52578877947112,2.33216637578486,0,3.14080423283228,0.568474235311454,0.651859905768103,1.52770577197669,1.40814148973101,1.84256883185997,2.38043640886014,2.53673742215138,0.945810864637146,1.55025282754142,1.75400245523236,1.47476983244164,2.41758974612254,2.4590339958857,1.50791283939272,0.54390568381871,8.35999264132362,5.79467167239938,2.0871576698413,3.16471553798949,0.491804836130026,0,2.52406575533005,1.95219372148319,2.15423397732799,1.91175038362042,0.445597348164788,0.283076530788832,2.02405350837447,2.04579100537918,1.58115111178609,0.321321316421807,1.98716119291576,1.24645922567079,0.81443479676788,4.45419332025846,2.65490276679926,3.39892890616974,3.02323556964751,7.73280826999182,6.20133975049623,8.30074899448604,4.9101375701962,6.5436071305951,3.20847640546249,1.26414703174326,6.32511651449993,3.09406629744561,3.40439605753788,1.08036656418786,0.517434735131018,0.428674070063185,0.532020700926821,1.42695054081656,1.81003922662333,3.65357938937519,3.75474732901937,5.08396970073168,14.7754026696824,3.95727007059552,0.645857706783622,1.74907482291652,1.07435109602823,1.14898629821543,0.874442509889552,2.41052892613663,0.683483523191411,1.65109494370578,0.555583582109135,1.50694765603753,0.820165366326151,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,19.0934123603023,0.632671987162271,2.23651413839534,1.51207477150522,1.88179466413022,3.05707589244649,3.50647300600534,7.02554373665355,9.42321391142507,7.38805347763219,8.07741107013003,0,2.0932316446157,1.65458490457098,1.94451188344048,1.6790777052105,1.68956125490778,2.34714477291508,1.95306577265925,0.209718688851422,0,0.576060012515731,1.26404448251271,2.02725215290164,0.924398614483445,0.51968329191118,0.716106782669926,0.596044064343795,0.721172697119813,0.590758108698309,0.605798699688886,0.609654453239999,1.00826185136841,1.55932609183604,1.05833025804362,0.818138315270983,4.0811469050738,1.55390167361845,0.448569283047378,1.17519231454855,2.12508553435409,2.62755465631655,5.12824547948342,4.71610433973945,12.0377304968487,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,0.415149390336707,1.19707462020309,1.19513524027894,1.70174701947806,0.628839487883947,0.551530525350042,1.11123363900808,0.824140228955577,1.28367683836726,0.758091635291392,0.50695859978048,0.943131706930381,0.936415074698824,0.832326981263301,0.861532034334199,0,1.15884325944855,1.35036454324594,1.23625770240992,0.735994600671987,0.342869252385415,1.4198064492747,0.953744759789284,0.145346416632329,1.12931256498397,0.676916863133412,2.0122077016005,0.526139422875686,0.950628796921032,1.12228454331548,1.54225523561426,1.47756723563345,0.818462086339379,0.77468420592983,0.771626443924566,0,1.40358965067245,1.50409737833809,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p2@Ttc39a}}
|EntrezGene=230603
|HGNC=
|UniProt=A2ACP1
|association_with_transcript=0bp_to_ENSMUST00000106619,NM_153392,uc008uci.2,uc008ucj.2_5end
|description=CAGE_peak_2_at_Ttc39a_5end
|id=chr4:109079699..109079724,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!5.04e-12!130;UBERON:0000925!5.04e-12!130;UBERON:0006595!5.04e-12!130;UBERON:0005409!8.31e-12!59;UBERON:0001007!3.41e-11!128;UBERON:0001555!3.41e-11!128;UBERON:0007026!3.41e-11!128;UBERON:0004921!2.08e-10!126;UBERON:0004185!2.08e-10!126;UBERON:0000160!4.22e-10!43;UBERON:0007023!4.75e-09!51;UBERON:0000466!5.53e-08!79;UBERON:0002108!1.48e-07!16;UBERON:0000922!7.84e-07!328;UBERON:0001045!8.17e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.08e-09,51;UBERON:0004119,1.03e-07,118;UBERON:0000925,1.03e-07,118;UBERON:0006595,1.03e-07,118;UBERON:0001264,5.14e-07,12;UBERON:0001007,5.22e-07,116;UBERON:0001555,5.22e-07,116;UBERON:0007026,5.22e-07,116;UBERON:0005409,7.71e-07,47
|phase1_expression=0.320297694209588,5.58360652222978,9.55498402718026,0,0,9.73699777088961,10.5125688267987,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0.699561878128147,0.315462165358238,0.137114433605739,0.84877930359606,1.53077922271926,0,0.522399578277871,3.67982572424835,4.81759490241057,8.03924749761028,12.0613358924541,10.9890328669803,5.70070258369122,3.78045194639896,10.4213340007993,0.635030673459631,0,0,0.288851619751275,0.997407872150954,0.408338712524738,0,0.7813353445238,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,2.34717403304412,0.872100625521786,0.878744730937887,0.388859798148567,0.839918529752175,1.43752564364972,0,0,0,0.257259436035947,5.44413535883638,0,0.404632921719196,1.05798195854407,0,0.338844532069132,0,0.899899717281399,0,0,1.49800055259202,1.15265491596466,0.103689612308478,0,0,3.71346279724945,2.20868540951614,0.122490799214954,0.191690942036473,0.919218786610021,2.20231761998777,2.042997409363,1.99688493233117,0.395658863190582,0.182975287204819,0,3.35019598801657,2.25105044012672,2.13917546887534,1.47314292736834,1.99320353118744,1.3047961207771,0.075726193333184,0,2.6087803983151,0,0.679971333707751,0.539703191637817,1.29955283489534,2.24013443548668,1.26399978118577,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,1.5154372870785,1.52015919285059,2.52762222507392,1.82694207550496,2.58937883647172,0.890652834388949,1.21439728736295,1.52232739156071,0.922461989024234,0.452167921657868,1.52865319276416,1.75933227861546,6.92145909656247,0.144599356919912,0,0.808834249737046,1.10420759230197,0,3.72783522436244,2.34224637609238,3.35114730901528,2.04365644166873,0,0,0,3.74476598512057,1.83000241127451,0.628271760564322,0.695297280769106,0,0.62336413367868,1.1356888414743,1.52759045775474,0.995255764880744,5.30717792710717,4.62972082950243,0,0.229902104433473,0.180062129805349,0.30140963567143,0.408218994907967,0.640568601424249,0.562210347358373,2.32833033665114,0.862271971731369,0.756424320671277,1.05570674498369,1.53437012699302,0.278047249225598,0,0.61734640922383,1.19420560091096,0,0,0,2.27838349789052,1.64168241986767,1.80062061461015,2.84093682702252,2.36117078096885,1.3884040159864,0.465067889500816,2.14618721119695,0.583826711835847,0.658239399653922,0.985004784474571,0.810688095458557,0.292399974850665,0.219550115291051,0.536825675041487,0.210289948564127,0.205809224758569,1.32167513193519,1.85115396664481,0.853153002140936,1.16118335930219,2.31961430379768,1.81515172161008,3.33567065767305,3.42406127002606,2.37264530772256,3.12928013975621,1.50801125280162,3.38226002469956,3.11942539390592,1.79763881730844,5.61958929674205,4.77939055810481,1.13800740571849,1.25673363870702,0,0.610953983535943,0.387904974335251,0.350679099451593,0.505892296994058,0,0,0.123397163921801,1.1858105083486,2.50267658574141,2.16214894624523,3.59779379815766,4.46292267054706,4.10001171579109,3.31013607315846,0.863088412352432,1.78348749452539,1.09824565275233,2.87536413054709,0.372140947668503,1.24815069245824,2.52578877947112,2.33216637578486,0,3.14080423283228,0.568474235311454,0.651859905768103,1.52770577197669,1.40814148973101,1.84256883185997,2.38043640886014,2.53673742215138,0.945810864637146,1.55025282754142,1.75400245523236,1.47476983244164,2.41758974612254,2.4590339958857,1.50791283939272,0.54390568381871,8.35999264132362,5.79467167239938,2.0871576698413,3.16471553798949,0.491804836130026,0,2.52406575533005,1.95219372148319,2.15423397732799,1.91175038362042,0.445597348164788,0.283076530788832,2.02405350837447,2.04579100537918,1.58115111178609,0.321321316421807,1.98716119291576,1.24645922567079,0.81443479676788,4.45419332025846,2.65490276679926,3.39892890616974,3.02323556964751,7.73280826999182,6.20133975049623,8.30074899448604,4.9101375701962,6.5436071305951,3.20847640546249,1.26414703174326,6.32511651449993,3.09406629744561,3.40439605753788,1.08036656418786,0.517434735131018,0.428674070063185,0.532020700926821,1.42695054081656,1.81003922662333,3.65357938937519,3.75474732901937,5.08396970073168,14.7754026696824,3.95727007059552,0.645857706783622,1.74907482291652,1.07435109602823,1.14898629821543,0.874442509889552,2.41052892613663,0.683483523191411,1.65109494370578,0.555583582109135,1.50694765603753,0.820165366326151,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,19.0934123603023,0.632671987162271,2.23651413839534,1.51207477150522,1.88179466413022,3.05707589244649,3.50647300600534,7.02554373665355,9.42321391142507,7.38805347763219,8.07741107013003,0,2.0932316446157,1.65458490457098,1.94451188344048,1.6790777052105,1.68956125490778,2.34714477291508,1.95306577265925,0.209718688851422,0,0.576060012515731,1.26404448251271,2.02725215290164,0.924398614483445,0.51968329191118,0.716106782669926,0.596044064343795,0.721172697119813,0.590758108698309,0.605798699688886,0.609654453239999,1.00826185136841,1.55932609183604,1.05833025804362,0.818138315270983,4.0811469050738,1.55390167361845,0.448569283047378,1.17519231454855,2.12508553435409,2.62755465631655,5.12824547948342,4.71610433973945,12.0377304968487,0,0.460325236507177,0,0.515559547031063,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,0.415149390336707,1.19707462020309,1.19513524027894,1.70174701947806,0.628839487883947,0.551530525350042,1.11123363900808,0.824140228955577,1.28367683836726,0.758091635291392,0.50695859978048,0.943131706930381,0.936415074698824,0.832326981263301,0.861532034334199,0,1.15884325944855,1.35036454324594,1.23625770240992,0.735994600671987,0.342869252385415,1.4198064492747,0.953744759789284,0.145346416632329,1.12931256498397,0.676916863133412,2.0122077016005,0.526139422875686,0.950628796921032,1.12228454331548,1.54225523561426,1.47756723563345,0.818462086339379,0.77468420592983,0.771626443924566,0,1.40358965067245,1.50409737833809,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p2@Ttc39a
}}

Revision as of 03:25, 14 September 2013

Short description:p2@Ttc39a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ttc39a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000106619, NM_153392, uc008uci.2, uc008ucj.2_5end
EntrezGene:Ttc39a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ttc39a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I210.99
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F814.78
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism1.08e-0951
endoderm-derived structure1.03e-07118
endoderm1.03e-07118
presumptive endoderm1.03e-07118
pancreas5.14e-0712
digestive system5.22e-07116
digestive tract5.22e-07116
primitive gut5.22e-07116
gastrointestinal system7.71e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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