FFCP PHASE1:Mm9::chr4:102887944..102887994,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=242585|HGNC=|MCL_coexpression_id=2878|UniProt=Q8BX24|association_with_transcript=-175bp_to_ENSMUST00000150285_5end|description=CAGE_peak_3_at_Slc35d1_5end|id=chr4:102887944..102887994,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.06e-12!94;UBERON:0007811!6.17e-10!86;UBERON:0003056!1.50e-07!49;UBERON:0002346!3.57e-07!71;UBERON:0003075!3.57e-07!71;UBERON:0007284!3.57e-07!71;UBERON:0001017!3.63e-07!73;UBERON:0005743!3.63e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.77e-09,43;UBERON:0002346,6.67e-08,64;UBERON:0003075,6.67e-08,64;UBERON:0007284,6.67e-08,64;UBERON:0003056,1.99e-07,49;UBERON:0001017,4.71e-07,73;UBERON:0010371,8.21e-07,73;UBERON:0007811,9.23e-07,36|phase1_expression=5.92550734287738,0,0,0,0,0,0.233612640595526,19.7558684865612,3.09735188733667,3.97909694747389,1.54096171402954,1.43589886191606,4.79362043807376,4.45844052336887,0.999329285446988,0.607425802169478,0.699561878128147,0.788655413395594,1.09691546884591,2.54633791078818,3.14660173558958,1.58865521921416,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,7.62036808151557,6.76571266343027,0,0,0,0,0,0,0,0.588231488031014,0,0,1.25896817975577,1.11514624341466,0.917733760808408,1.56478268869608,0.872100625521786,0.219686182734472,0.972149495371417,1.81982348112971,1.43752564364972,2.68452169692378,5.07753499407941,4.03312558970957,1.02903774414379,0.85960031981627,1.03134418455488,7.89034197352431,6.34789175126439,10.775133859605,1.35537812827653,2.66788438833342,1.7997994345628,0,0.7104801149461,1.49800055259202,1.15265491596466,4.76972216618997,4.86021377994086,4.41682418837902,4.28476476605705,4.63823935998388,5.26710436624302,3.45043695665651,7.35375029288017,0,2.17068474744819,1.84327839907492,5.80299666012853,3.20206752608434,4.68822033501084,1.95428099300967,2.25105044012672,2.13917546887534,4.71405736757868,3.70166370077668,6.52398060388552,0.454357159999104,0.982430281388212,0.289864488701678,0.860423876981386,0,0,0,0,0.983110940922263,0.511290967734173,1.03914401841148,0.70667914902068,3.52108549441701,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.37020655662872,3.6251303710604,2.3750742250372,3.64319186208885,3.04465478312141,1.15307748628029,1.20578112442098,3.88042733547826,1.38233250462643,0.494389935468748,1.3013942122792,2.65383165584962,4.04417124868523,1.76673214768315,2.90925151881133,1.86391761218122,1.46390398505774,5.65506108396329,0.510914110417183,3.23500836165985,4.19931911695385,2.28726408731516,3.89455662452539,2.28750301409313,9.1727677042391,4.86708096538374,4.09144731728529,2.28566849015516,3.56930778749067,4.58277137326423,0.995255764880744,0.758168275301024,2.31486041475121,5.59517904739626,5.9774547152703,5.58192602396583,4.06903008156431,6.19132142277083,5.25266253167884,5.43470002446427,3.62184719034622,6.46703978798527,10.2117283290622,9.85326295318113,6.79506770525482,8.61946472599353,5.57203466435466,3.49829631893504,4.77682240364384,0.702213187313235,2.57347907114715,2.27330799516474,2.89976081549703,2.34526059981096,2.16074473753218,5.44512891845984,2.36117078096885,2.00547246753592,3.72054311600653,2.14618721119695,2.91913355917924,1.81015834904829,1.80584210487005,2.43206428637567,2.33919979880532,1.75640092232841,1.61047702512446,4.6263788684108,8.95270127699774,0,0.264450566663544,5.54549451391608,6.27039014023184,3.22168653305233,3.42861991859682,2.00140239460383,1.90225626112559,1.89811624617805,1.97638745668813,1.50801125280162,1.1937388322469,1.75467678407208,0.898819408654221,1.51296634912286,0.398282546508734,4.93136542478012,3.77020091612105,3.38123207019241,3.66572390121566,1.93952487167626,3.7873342740772,2.27651533647326,0.442830443938806,1.41298855057237,0.493588655687202,0.592905254174298,2.8363667971736,1.96558995113203,1.12431056192427,1.42002084971952,1.4470629585145,0.25462585178142,0.863088412352432,1.62135226775035,0,4.31304619582064,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0,1.29327233116623,8.7166049414423,3.25929952884052,3.39490171550376,3.28566347603903,3.01511263395268,4.99891645860629,3.51240566144038,2.52216230569906,2.6575762757853,4.30527875375215,1.3109065177259,1.55416483679306,2.60368305446721,0,0,0,0.275936746304732,1.9266070798535,3.8679856575427,1.63934945376675,1.26235463602186,4.10160685241134,3.12350995437311,4.95473814785438,4.30143836314594,4.45597348164788,4.81230102341015,5.66734982344852,5.55286130031493,2.37172666767914,6.42642632843614,4.25820255624806,4.62970569534864,7.65568708961808,3.29940245945071,0,2.91336763385978,3.02323556964751,1.50884063804718,1.77181135728464,2.76691633149535,3.6179961043551,3.99887102425256,3.56497378384721,0.632073515871632,0,0,1.70219802876894,8.28281032544027,6.72665155670323,9.00215547132688,10.2857335512519,8.20496560969525,5.59466670047211,5.48036908406279,0.938686832254841,1.270992425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| ||
|EntrezGene=242585 | |||
|HGNC= | |||
|MCL_coexpression_id=2878 | |||
|UniProt=Q8BX24 | |||
|association_with_transcript=-175bp_to_ENSMUST00000150285_5end | |||
|description=CAGE_peak_3_at_Slc35d1_5end | |||
|id=chr4:102887944..102887994,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.06e-12!94;UBERON:0007811!6.17e-10!86;UBERON:0003056!1.50e-07!49;UBERON:0002346!3.57e-07!71;UBERON:0003075!3.57e-07!71;UBERON:0007284!3.57e-07!71;UBERON:0001017!3.63e-07!73;UBERON:0005743!3.63e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.77e-09,43;UBERON:0002346,6.67e-08,64;UBERON:0003075,6.67e-08,64;UBERON:0007284,6.67e-08,64;UBERON:0003056,1.99e-07,49;UBERON:0001017,4.71e-07,73;UBERON:0010371,8.21e-07,73;UBERON:0007811,9.23e-07,36 | |||
|phase1_expression=5.92550734287738,0,0,0,0,0,0.233612640595526,19.7558684865612,3.09735188733667,3.97909694747389,1.54096171402954,1.43589886191606,4.79362043807376,4.45844052336887,0.999329285446988,0.607425802169478,0.699561878128147,0.788655413395594,1.09691546884591,2.54633791078818,3.14660173558958,1.58865521921416,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,7.62036808151557,6.76571266343027,0,0,0,0,0,0,0,0.588231488031014,0,0,1.25896817975577,1.11514624341466,0.917733760808408,1.56478268869608,0.872100625521786,0.219686182734472,0.972149495371417,1.81982348112971,1.43752564364972,2.68452169692378,5.07753499407941,4.03312558970957,1.02903774414379,0.85960031981627,1.03134418455488,7.89034197352431,6.34789175126439,10.775133859605,1.35537812827653,2.66788438833342,1.7997994345628,0,0.7104801149461,1.49800055259202,1.15265491596466,4.76972216618997,4.86021377994086,4.41682418837902,4.28476476605705,4.63823935998388,5.26710436624302,3.45043695665651,7.35375029288017,0,2.17068474744819,1.84327839907492,5.80299666012853,3.20206752608434,4.68822033501084,1.95428099300967,2.25105044012672,2.13917546887534,4.71405736757868,3.70166370077668,6.52398060388552,0.454357159999104,0.982430281388212,0.289864488701678,0.860423876981386,0,0,0,0,0.983110940922263,0.511290967734173,1.03914401841148,0.70667914902068,3.52108549441701,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.37020655662872,3.6251303710604,2.3750742250372,3.64319186208885,3.04465478312141,1.15307748628029,1.20578112442098,3.88042733547826,1.38233250462643,0.494389935468748,1.3013942122792,2.65383165584962,4.04417124868523,1.76673214768315,2.90925151881133,1.86391761218122,1.46390398505774,5.65506108396329,0.510914110417183,3.23500836165985,4.19931911695385,2.28726408731516,3.89455662452539,2.28750301409313,9.1727677042391,4.86708096538374,4.09144731728529,2.28566849015516,3.56930778749067,4.58277137326423,0.995255764880744,0.758168275301024,2.31486041475121,5.59517904739626,5.9774547152703,5.58192602396583,4.06903008156431,6.19132142277083,5.25266253167884,5.43470002446427,3.62184719034622,6.46703978798527,10.2117283290622,9.85326295318113,6.79506770525482,8.61946472599353,5.57203466435466,3.49829631893504,4.77682240364384,0.702213187313235,2.57347907114715,2.27330799516474,2.89976081549703,2.34526059981096,2.16074473753218,5.44512891845984,2.36117078096885,2.00547246753592,3.72054311600653,2.14618721119695,2.91913355917924,1.81015834904829,1.80584210487005,2.43206428637567,2.33919979880532,1.75640092232841,1.61047702512446,4.6263788684108,8.95270127699774,0,0.264450566663544,5.54549451391608,6.27039014023184,3.22168653305233,3.42861991859682,2.00140239460383,1.90225626112559,1.89811624617805,1.97638745668813,1.50801125280162,1.1937388322469,1.75467678407208,0.898819408654221,1.51296634912286,0.398282546508734,4.93136542478012,3.77020091612105,3.38123207019241,3.66572390121566,1.93952487167626,3.7873342740772,2.27651533647326,0.442830443938806,1.41298855057237,0.493588655687202,0.592905254174298,2.8363667971736,1.96558995113203,1.12431056192427,1.42002084971952,1.4470629585145,0.25462585178142,0.863088412352432,1.62135226775035,0,4.31304619582064,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0,1.29327233116623,8.7166049414423,3.25929952884052,3.39490171550376,3.28566347603903,3.01511263395268,4.99891645860629,3.51240566144038,2.52216230569906,2.6575762757853,4.30527875375215,1.3109065177259,1.55416483679306,2.60368305446721,0,0,0,0.275936746304732,1.9266070798535,3.8679856575427,1.63934945376675,1.26235463602186,4.10160685241134,3.12350995437311,4.95473814785438,4.30143836314594,4.45597348164788,4.81230102341015,5.66734982344852,5.55286130031493,2.37172666767914,6.42642632843614,4.25820255624806,4.62970569534864,7.65568708961808,3.29940245945071,0,2.91336763385978,3.02323556964751,1.50884063804718,1.77181135728464,2.76691633149535,3.6179961043551,3.99887102425256,3.56497378384721,0.632073515871632,0,0,1.70219802876894,8.28281032544027,6.72665155670323,9.00215547132688,10.2857335512519,8.20496560969525,5.59466670047211,5.48036908406279,0.938686832254841,1.27099242518292,0,1.48397627647332,6.45857706783622,2.41251699712623,1.79058516004705,1.14898629821543,0.874442509889552,3.52308073819968,1.02522528478712,1.857481811669,2.40752885580625,0.941842285023455,1.91371918809435,0.915112692826091,4.41943917984024,5.17820373597535,4.83699908315483,1.90934123603023,6.16855187483214,4.67634774391752,2.26811215725783,2.09088296014469,3.27543845619266,3.9110660451598,3.80205896336545,0.785267825952089,0.777689839750757,0,3.38215763210514,2.39226473670366,3.30916980914195,3.69457257853691,3.7456348808542,4.89972763923257,4.45957506853865,3.1249052362548,3.77493639932559,7.9722759872582,5.47257011889944,12.324433704499,4.45995473638361,5.54639168690067,6.10627867995637,8.77230808770659,10.3314304486258,11.538763153917,12.4059202826645,10.5005107946074,14.02205242452,11.1917065501893,9.55087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| |||
|short_description=p3@Slc35d1 | |||
}} |
Revision as of 03:18, 14 September 2013
Short description: | p3@Slc35d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc35d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2878 |
Association with transcript: | -175bp_to_ENSMUST00000150285_5end |
EntrezGene: | Slc35d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.77e-09 | 43 |
neurectoderm | 6.67e-08 | 64 |
neural plate | 6.67e-08 | 64 |
presumptive neural plate | 6.67e-08 | 64 |
pre-chordal neural plate | 1.99e-07 | 49 |
central nervous system | 4.71e-07 | 73 |
ecto-epithelium | 8.21e-07 | 73 |
craniocervical region | 9.23e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.