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FFCP PHASE1:Mm9::chr4:101091964..101091983,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11639|HGNC=|MCL_coexpression_id=3440|UniProt=Q3U489,Q9WUR9|association_with_transcript=38bp_to_NM_001177604,uc008tvo.2_5end|description=CAGE_peak_3_at_Ak4_5end|id=chr4:101091964..101091983,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!3.46e-14!114;UBERON:0004111!1.16e-12!122;UBERON:0002107!2.80e-11!22;UBERON:0007499!2.80e-11!22;UBERON:0006925!2.80e-11!22;UBERON:0009497!2.80e-11!22;UBERON:0000015!2.80e-11!22;UBERON:0002423!2.80e-11!22;UBERON:0006235!2.80e-11!22;UBERON:0008835!2.80e-11!22;UBERON:0003894!2.80e-11!22;UBERON:0004161!2.80e-11!22;UBERON:0008836!2.80e-11!22;UBERON:0009854!3.42e-10!23;UBERON:0009856!3.42e-10!23;UBERON:0003914!5.13e-09!47;UBERON:0002365!2.44e-08!25;UBERON:0002330!2.44e-08!25;UBERON:0000955!4.16e-08!50;UBERON:0006238!4.16e-08!50;UBERON:0002616!9.84e-08!49;UBERON:0001049!3.53e-07!52;UBERON:0005068!3.53e-07!52;UBERON:0006241!3.53e-07!52;UBERON:0007135!3.53e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.86e-19,22;UBERON:0007499,5.86e-19,22;UBERON:0006925,5.86e-19,22;UBERON:0009497,5.86e-19,22;UBERON:0000015,5.86e-19,22;UBERON:0002423,5.86e-19,22;UBERON:0006235,5.86e-19,22;UBERON:0008835,5.86e-19,22;UBERON:0003894,5.86e-19,22;UBERON:0004161,5.86e-19,22;UBERON:0008836,5.86e-19,22;UBERON:0009854,7.09e-18,23;UBERON:0009856,7.09e-18,23;UBERON:0002365,5.63e-16,25;UBERON:0002330,5.63e-16,25;UBERON:0000025,5.98e-14,114;UBERON:0004111,3.36e-12,122;UBERON:0005172,2.89e-11,49;UBERON:0005173,2.89e-11,49;UBERON:0002417,2.89e-11,49;UBERON:0000916,2.89e-11,49;UBERON:0000073,1.22e-09,54;UBERON:0003914,3.75e-09,47;UBERON:0000955,4.44e-09,47;UBERON:0006238,4.44e-09,47;UBERON:0002616,1.88e-08,46;UBERON:0003104,2.12e-08,61;UBERON:0009142,2.12e-08,61;UBERON:0001049,2.65e-08,52;UBERON:0005068,2.65e-08,52;UBERON:0006241,2.65e-08,52;UBERON:0007135,2.65e-08,52;UBERON:0002021,1.73e-07,10;UBERON:0000411,1.73e-07,10;UBERON:0001950,1.73e-07,10;UBERON:0005256,3.19e-07,45;UBERON:0003528,8.18e-07,29;UBERON:0002791,8.18e-07,29;UBERON:0001893,8.18e-07,29|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0.518448061542388,0.405017814995072,0,0.571301968807607,1.10434270475807,0,0.0958454710182364,0,2.20231761998777,1.91531007127782,1.38245879930619,0.527545150920775,0.274462930807229,0.52091337055676,3.90856198601933,2.8138130501584,2.13917546887534,0.883885756421003,0.427115042397309,0,0.075726193333184,0,0,6.88339101585109,8.83962733820076,7.01614149129162,11.0461990966104,17.0250217096988,4.0728881838208,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,6.8510327831436,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,13.4679166625312,7.95897485891129,0,0,0.599902730993408,0.508280908292259,2.99581278809645,1.37250180845588,0.376963056338593,2.08589184230732,2.04572365864264,2.90903262383384,0.811206315338788,0.203678727700633,0.373220911830279,0.252722758433675,0,0.520481771850815,0,0,0.30140963567143,0.272145996605311,0.384341160854549,0.187403449119458,1.55222022443409,0,0.756424320671277,0.351902248327898,0,0.834141747676794,0.348252166522167,1.02891068203972,0,0.702213187313235,1.54408744268829,0.568326998791185,0.828503090142008,1.40715635988658,0.720248245844059,0.23674473558521,1.18058539048442,0.617068451549513,0.697601834251224,0.536546802799238,0.116765342367169,0.16455984991348,0.492502392237286,0.56748166682099,0.292399974850665,1.09775057645525,0.402619256281115,3.15434922846191,2.6755199218614,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0,0,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0.948339504765408,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,1.40271639780637,1.26473074248515,9.74226976665374,7.37894020854462,7.65062416315163,16.6013471168803,0.333690211432188,0.589676985339609,0.899448449539415,1.42002084971952,1.92941727801933,3.31013607315846,2.5892652370573,5.5125977103512,7.13859674289012,17.2521847832825,10.0478055870496,6.86482880852033,7.07220858251913,5.38192240565737,8.20153986317724,0,0.189491411770485,0.651859905768103,0.678980343100753,0.469380496577004,0.502518772325447,0.476087281772027,0,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,2.0871576698413,1.05490517932983,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0,0.445597348164788,0,0,0,0,1.60660658210904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|EntrezGene=11639
|HGNC=
|MCL_coexpression_id=3440
|UniProt=Q3U489,Q9WUR9
|association_with_transcript=38bp_to_NM_001177604,uc008tvo.2_5end
|description=CAGE_peak_3_at_Ak4_5end
|id=chr4:101091964..101091983,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!3.46e-14!114;UBERON:0004111!1.16e-12!122;UBERON:0002107!2.80e-11!22;UBERON:0007499!2.80e-11!22;UBERON:0006925!2.80e-11!22;UBERON:0009497!2.80e-11!22;UBERON:0000015!2.80e-11!22;UBERON:0002423!2.80e-11!22;UBERON:0006235!2.80e-11!22;UBERON:0008835!2.80e-11!22;UBERON:0003894!2.80e-11!22;UBERON:0004161!2.80e-11!22;UBERON:0008836!2.80e-11!22;UBERON:0009854!3.42e-10!23;UBERON:0009856!3.42e-10!23;UBERON:0003914!5.13e-09!47;UBERON:0002365!2.44e-08!25;UBERON:0002330!2.44e-08!25;UBERON:0000955!4.16e-08!50;UBERON:0006238!4.16e-08!50;UBERON:0002616!9.84e-08!49;UBERON:0001049!3.53e-07!52;UBERON:0005068!3.53e-07!52;UBERON:0006241!3.53e-07!52;UBERON:0007135!3.53e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.86e-19,22;UBERON:0007499,5.86e-19,22;UBERON:0006925,5.86e-19,22;UBERON:0009497,5.86e-19,22;UBERON:0000015,5.86e-19,22;UBERON:0002423,5.86e-19,22;UBERON:0006235,5.86e-19,22;UBERON:0008835,5.86e-19,22;UBERON:0003894,5.86e-19,22;UBERON:0004161,5.86e-19,22;UBERON:0008836,5.86e-19,22;UBERON:0009854,7.09e-18,23;UBERON:0009856,7.09e-18,23;UBERON:0002365,5.63e-16,25;UBERON:0002330,5.63e-16,25;UBERON:0000025,5.98e-14,114;UBERON:0004111,3.36e-12,122;UBERON:0005172,2.89e-11,49;UBERON:0005173,2.89e-11,49;UBERON:0002417,2.89e-11,49;UBERON:0000916,2.89e-11,49;UBERON:0000073,1.22e-09,54;UBERON:0003914,3.75e-09,47;UBERON:0000955,4.44e-09,47;UBERON:0006238,4.44e-09,47;UBERON:0002616,1.88e-08,46;UBERON:0003104,2.12e-08,61;UBERON:0009142,2.12e-08,61;UBERON:0001049,2.65e-08,52;UBERON:0005068,2.65e-08,52;UBERON:0006241,2.65e-08,52;UBERON:0007135,2.65e-08,52;UBERON:0002021,1.73e-07,10;UBERON:0000411,1.73e-07,10;UBERON:0001950,1.73e-07,10;UBERON:0005256,3.19e-07,45;UBERON:0003528,8.18e-07,29;UBERON:0002791,8.18e-07,29;UBERON:0001893,8.18e-07,29
|phase1_expression=0.480446541314382,0,0.454999239389536,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0.0992909512008853,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0,0,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0.518448061542388,0.405017814995072,0,0.571301968807607,1.10434270475807,0,0.0958454710182364,0,2.20231761998777,1.91531007127782,1.38245879930619,0.527545150920775,0.274462930807229,0.52091337055676,3.90856198601933,2.8138130501584,2.13917546887534,0.883885756421003,0.427115042397309,0,0.075726193333184,0,0,6.88339101585109,8.83962733820076,7.01614149129162,11.0461990966104,17.0250217096988,4.0728881838208,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,6.8510327831436,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,13.4679166625312,7.95897485891129,0,0,0.599902730993408,0.508280908292259,2.99581278809645,1.37250180845588,0.376963056338593,2.08589184230732,2.04572365864264,2.90903262383384,0.811206315338788,0.203678727700633,0.373220911830279,0.252722758433675,0,0.520481771850815,0,0,0.30140963567143,0.272145996605311,0.384341160854549,0.187403449119458,1.55222022443409,0,0.756424320671277,0.351902248327898,0,0.834141747676794,0.348252166522167,1.02891068203972,0,0.702213187313235,1.54408744268829,0.568326998791185,0.828503090142008,1.40715635988658,0.720248245844059,0.23674473558521,1.18058539048442,0.617068451549513,0.697601834251224,0.536546802799238,0.116765342367169,0.16455984991348,0.492502392237286,0.56748166682099,0.292399974850665,1.09775057645525,0.402619256281115,3.15434922846191,2.6755199218614,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0,0,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0.948339504765408,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,1.40271639780637,1.26473074248515,9.74226976665374,7.37894020854462,7.65062416315163,16.6013471168803,0.333690211432188,0.589676985339609,0.899448449539415,1.42002084971952,1.92941727801933,3.31013607315846,2.5892652370573,5.5125977103512,7.13859674289012,17.2521847832825,10.0478055870496,6.86482880852033,7.07220858251913,5.38192240565737,8.20153986317724,0,0.189491411770485,0.651859905768103,0.678980343100753,0.469380496577004,0.502518772325447,0.476087281772027,0,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,2.0871576698413,1.05490517932983,0.327869890753351,0.252470927204373,0,0.390438744296638,0,0,0.445597348164788,0,0,0,0,1.60660658210904,0.141940085208269,0.712262414669021,1.30309567482861,0.164970122972535,0,0,0,0.943025398779491,0.590603785761546,0,0.775284879504663,0,0.356497378384721,0,0,0,2.04263763452273,0,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.658196082408484,0,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0.322928853391811,0.301564624640779,0.358117032009409,0.492422699235184,0,1.11255181206306,0,0.206386867963223,0.370389054739423,0,0,0,0.339956859987711,0.279902904647316,0.414599921413271,3.81868247206045,0.474503990371703,0.813277868507395,0.432021363287205,0.209088296014469,0.436725127492355,1.34864346384821,1.57041565878138,0.26175594198403,0.259229946583586,0,0.56369293868419,0.299033092087958,0.66183396182839,0,0.387479470433193,0,0.234714477291508,0.13020438484395,0.838874755405687,0,0.576060012515731,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0.665957860122194,0.269141569828427,0.335769232728157,0.19318959403219,0.375364950902364,0,0,0,0.564751842617067,2.30162618253588,3.43737308063638,1.20297227640581,2.05524755931193,0.755393897389701,2.70009000092722,3.15224842256954,3.17199686288943,4.14208249401456,0.726511433089237,0,0.341467211508268,0.729320151204882,0.628839487883947,1.2869045591501,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.754505365544305,0.655490552289177,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.578727661391115,1.64834360321323,0.294397840268795,0.342869252385415,0.887379030796687,0,1.0174249164263,0.658765662907314,0.592302255241736,0.548783918618318,0,0.543216455383447,0.561142271657738,0.593175090620871,0.788035859004508,1.22769312950907,0.154936841185966,1.15743966588685,0.249810577937946,0.701794825336225,0.859484216193193,0,0.220591419119515,0.463735671240843
|short_description=p3@Ak4
}}

Revision as of 03:14, 14 September 2013

Short description:p3@Ak4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ak4_5end
Coexpression cluster:MCL_coexpression_mm9:3440
Association with transcript: 38bp_to_NM_001177604, uc008tvo.2_5end
EntrezGene:Ak4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ak4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I19.74
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B216.60
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver5.86e-1922
epithelial sac5.86e-1922
digestive gland5.86e-1922
epithelium of foregut-midgut junction5.86e-1922
anatomical boundary5.86e-1922
hepatobiliary system5.86e-1922
foregut-midgut junction5.86e-1922
hepatic diverticulum5.86e-1922
liver primordium5.86e-1922
septum transversum5.86e-1922
liver bud5.86e-1922
digestive tract diverticulum7.09e-1823
sac7.09e-1823
exocrine gland5.63e-1625
exocrine system5.63e-1625
tube5.98e-14114
anatomical conduit3.36e-12122
abdomen element2.89e-1149
abdominal segment element2.89e-1149
abdominal segment of trunk2.89e-1149
abdomen2.89e-1149
regional part of nervous system1.22e-0954
epithelial tube3.75e-0947
brain4.44e-0947
future brain4.44e-0947
regional part of brain1.88e-0846
mesenchyme2.12e-0861
entire embryonic mesenchyme2.12e-0861
neural tube2.65e-0852
neural rod2.65e-0852
future spinal cord2.65e-0852
neural keel2.65e-0852
occipital lobe1.73e-0710
visual cortex1.73e-0710
neocortex1.73e-0710
trunk mesenchyme3.19e-0745
brain grey matter8.18e-0729
regional part of telencephalon8.18e-0729
telencephalon8.18e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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