FFCP PHASE1:Hg19::chr8:116681022..116681042,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7227|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12340|TSSclassifier=S|UniProt=E5RJ97|association_with_transcript=87bp_to_ENST00000519674_5end|description=CAGE_peak_10_at_TRPS1_5end|id=chr8:116681022..116681042,-|ontology_enrichment_celltype=CL:0002057!8.82e-22!42;CL:0000860!6.87e-19!45;CL:0002009!3.77e-18!65;CL:0000557!3.21e-17!71;CL:0002194!4.14e-17!63;CL:0000576!4.14e-17!63;CL:0000040!4.14e-17!63;CL:0000559!4.14e-17!63;CL:0000766!2.07e-16!76;CL:0000839!5.51e-16!70;CL:0000738!1.38e-11!140;CL:0000763!1.60e-11!112;CL:0000049!1.60e-11!112;CL:0002087!3.26e-11!119;CL:0002031!6.41e-11!124;CL:0000037!1.02e-08!172;CL:0000566!1.02e-08!172;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165;CL:0000988!3.99e-08!182|ontology_enrichment_celltype_v019=CL:0000860;8.75e-29;33!CL:0002057;8.75e-29;33!CL:0000473;2.70e-24;39!CL:0000234;2.70e-24;39!CL:0000576;2.28e-19;48!CL:0000766;9.44e-10;69|ontology_enrichment_celltype_v019_2=CL:0000860,3.52e-30,42;CL:0002057,3.52e-30,42;CL:0000473,3.47e-29,48;CL:0000234,3.47e-29,48;CL:0002009,5.67e-28,61;CL:0002194,3.84e-26,59;CL:0000576,3.84e-26,59;CL:0000040,3.84e-26,59;CL:0000559,3.84e-26,59;CL:0000557,4.58e-24,67;CL:0000839,8.44e-22,66;CL:0000766,7.05e-21,72;CL:0002087,5.29e-15,115;CL:0000763,9.90e-15,108;CL:0000049,9.90e-15,108;CL:0002031,5.18e-14,120;CL:0000738,7.40e-13,136;CL:0002032,3.06e-10,161;CL:0000837,3.06e-10,161;CL:0000037,4.28e-10,168;CL:0000988,8.37e-10,177|ontology_enrichment_development_v019=CL:0002057;7.82e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!1.10e-16!86;UBERON:0002371!3.28e-16!80;UBERON:0002390!1.49e-15!102;UBERON:0003061!1.49e-15!102;UBERON:0004765!4.66e-15!101;UBERON:0001434!4.66e-15!101;UBERON:0002193!3.85e-12!112;UBERON:0007023!1.13e-09!115;UBERON:0002204!1.22e-08!167;UBERON:0002405!1.45e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.86e-22,82;UBERON:0002371,2.72e-21,76;UBERON:0004765,8.42e-20,90;UBERON:0002390,3.22e-18,98;UBERON:0003061,3.22e-18,98;UBERON:0001434,7.02e-18,100;UBERON:0002405,3.26e-17,93;UBERON:0002193,8.73e-16,108;UBERON:0002204,1.74e-09,167|phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,2.00146596706261,0,0,0,0,1.30592814099919,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0.940364164434263,2.0036519099174,1.36874425072884,0.125542639594803,0,0,0,0.786728553697808,0.383829398097213,1.23852898652861,0,0.30120591877825,0,0.154934401160603,0.710846162437108,0.293600439334847,2.76997704265939,1.60435557976113,0.868043482863407,2.46307021663917,1.6194683300949,2.31818010870768,6.68831898385998,2.26725566213286,2.18325655069035,6.27558399645349,2.05583944010913,2.16794459626573,9.20615655430881,6.14785695669842,3.54723344832878,7.92915065694223,2.5819387343353,6.77132432971709,7.52969358170419,3.27487380069415,1.57306439111559,9.79468455586888,0.641858054152187,5.11469700639233,5.27762080298746,7.38015533200038,4.26224750532694,5.80418477257168,2.8369261234557,3.73693349397345,9.04495194924276,4.17186334736161,3.04064382587163,5.44859552370032,0.736555271975129,0.632924774881769,1.05627643155971,1.27562579979026,0.419317291016752,1.34794357375794,3.00353785683013,1.76798145366788,1.42506371870624,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,1.70763890732835,1.17447437874188,0,2.64342657158052,0,0.790152254325231,1.96709770113833,1.57204305099666,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0.111410456885174,0.589211814949674,0.664601683750863,0.812411591295047,0.640456598628376,0.780356085359269,0.328875809207352,0,0.289803085735052,1.33457906845854,1.33770414044857,0,0.113309342697566,1.91610246800961,1.03088233644789,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,2.49861453104692,0,0,1.61285394579786,3.20928234940209,0.434473211648397,2.43806866313962,0.670700859703636,0.383587685530591,0,2.00535164254356,0.579386075843295,1.5905718941022,2.43317435151318,0.378139268656271,0,0.263504357079378,0.72038491523742,0,0,0.324547393654683,1.21890816109487,0.531831842075461,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0,1.49091585508596,0.633152558322899,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.933633106199299,0.404132016209064,0,0.302714855289863,1.72852777344,0,0.624320153660641,0,0,0.117434498643765,0.323745888736263,0,0.61246251376468,0.491337269247072,0.619954687054593,1.18800285728205,0.494533858557114,0,0,0.841680569770331,1.00094815897571,0,0,0.612975591598039,0.751190294532984,0,0.358779271377724,1.06778694409284,0.423863802319124,0,0.103052529238439,0.257640540045629,1.48893485065272,0.843881661206331,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |||
|TSSclassifier=S | |||
|UniProt=E5RJ97 | |||
|association_with_transcript=87bp_to_ENST00000519674_5end | |||
|description=CAGE_peak_10_at_TRPS1_5end | |||
|id=chr8:116681022..116681042,- | |||
|ontology_enrichment_celltype=CL:0002057!8.82e-22!42;CL:0000860!6.87e-19!45;CL:0002009!3.77e-18!65;CL:0000557!3.21e-17!71;CL:0002194!4.14e-17!63;CL:0000576!4.14e-17!63;CL:0000040!4.14e-17!63;CL:0000559!4.14e-17!63;CL:0000766!2.07e-16!76;CL:0000839!5.51e-16!70;CL:0000738!1.38e-11!140;CL:0000763!1.60e-11!112;CL:0000049!1.60e-11!112;CL:0002087!3.26e-11!119;CL:0002031!6.41e-11!124;CL:0000037!1.02e-08!172;CL:0000566!1.02e-08!172;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165;CL:0000988!3.99e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.75e-29;33!CL:0002057;8.75e-29;33!CL:0000473;2.70e-24;39!CL:0000234;2.70e-24;39!CL:0000576;2.28e-19;48!CL:0000766;9.44e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.52e-30,42;CL:0002057,3.52e-30,42;CL:0000473,3.47e-29,48;CL:0000234,3.47e-29,48;CL:0002009,5.67e-28,61;CL:0002194,3.84e-26,59;CL:0000576,3.84e-26,59;CL:0000040,3.84e-26,59;CL:0000559,3.84e-26,59;CL:0000557,4.58e-24,67;CL:0000839,8.44e-22,66;CL:0000766,7.05e-21,72;CL:0002087,5.29e-15,115;CL:0000763,9.90e-15,108;CL:0000049,9.90e-15,108;CL:0002031,5.18e-14,120;CL:0000738,7.40e-13,136;CL:0002032,3.06e-10,161;CL:0000837,3.06e-10,161;CL:0000037,4.28e-10,168;CL:0000988,8.37e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.82e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.10e-16!86;UBERON:0002371!3.28e-16!80;UBERON:0002390!1.49e-15!102;UBERON:0003061!1.49e-15!102;UBERON:0004765!4.66e-15!101;UBERON:0001434!4.66e-15!101;UBERON:0002193!3.85e-12!112;UBERON:0007023!1.13e-09!115;UBERON:0002204!1.22e-08!167;UBERON:0002405!1.45e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.86e-22,82;UBERON:0002371,2.72e-21,76;UBERON:0004765,8.42e-20,90;UBERON:0002390,3.22e-18,98;UBERON:0003061,3.22e-18,98;UBERON:0001434,7.02e-18,100;UBERON:0002405,3.26e-17,93;UBERON:0002193,8.73e-16,108;UBERON:0002204,1.74e-09,167 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.563817616383885,2.00146596706261,0,0,0,0,1.30592814099919,0.245733936501509,0,0,0.263766978228454,0.37129905888014,0.994192127183747,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0.940364164434263,2.0036519099174,1.36874425072884,0.125542639594803,0,0,0,0.786728553697808,0.383829398097213,1.23852898652861,0,0.30120591877825,0,0.154934401160603,0.710846162437108,0.293600439334847,2.76997704265939,1.60435557976113,0.868043482863407,2.46307021663917,1.6194683300949,2.31818010870768,6.68831898385998,2.26725566213286,2.18325655069035,6.27558399645349,2.05583944010913,2.16794459626573,9.20615655430881,6.14785695669842,3.54723344832878,7.92915065694223,2.5819387343353,6.77132432971709,7.52969358170419,3.27487380069415,1.57306439111559,9.79468455586888,0.641858054152187,5.11469700639233,5.27762080298746,7.38015533200038,4.26224750532694,5.80418477257168,2.8369261234557,3.73693349397345,9.04495194924276,4.17186334736161,3.04064382587163,5.44859552370032,0.736555271975129,0.632924774881769,1.05627643155971,1.27562579979026,0.419317291016752,1.34794357375794,3.00353785683013,1.76798145366788,1.42506371870624,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,1.70763890732835,1.17447437874188,0,2.64342657158052,0,0.790152254325231,1.96709770113833,1.57204305099666,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0.111410456885174,0.589211814949674,0.664601683750863,0.812411591295047,0.640456598628376,0.780356085359269,0.328875809207352,0,0.289803085735052,1.33457906845854,1.33770414044857,0,0.113309342697566,1.91610246800961,1.03088233644789,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,2.49861453104692,0,0,1.61285394579786,3.20928234940209,0.434473211648397,2.43806866313962,0.670700859703636,0.383587685530591,0,2.00535164254356,0.579386075843295,1.5905718941022,2.43317435151318,0.378139268656271,0,0.263504357079378,0.72038491523742,0,0,0.324547393654683,1.21890816109487,0.531831842075461,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0,1.49091585508596,0.633152558322899,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.933633106199299,0.404132016209064,0,0.302714855289863,1.72852777344,0,0.624320153660641,0,0,0.117434498643765,0.323745888736263,0,0.61246251376468,0.491337269247072,0.619954687054593,1.18800285728205,0.494533858557114,0,0,0.841680569770331,1.00094815897571,0,0,0.612975591598039,0.751190294532984,0,0.358779271377724,1.06778694409284,0.423863802319124,0,0.103052529238439,0.257640540045629,1.48893485065272,0.843881661206331,0.194874010322397,0.252433774244115,1.56484827691909,0.161646056818812,0,0,0,0.57978255948989,0.272746120590835,0,0.365921118388786,0,0.232387885739037,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0,0.591534000199219,0.505754070234305,0.723033089650446,0.110293972732394,0.435758888184812,0.71181185733329,0.808987848960987,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,0,2.46217006087397,0.234004265139238,1.0404181360211,0,0.335964256397719,0,0.447792613514241,0.290633938513962,0,0.492663237895943,0.352193736052904,0.414656231081544,0.576479813667846,0.6312121671319,0,0,0,0,0,0,0,0,0,0.22001485746285,1.03417372606222,0,0,0,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,0.871533458600294,0.699810938274399,0,1.00451418286425,0,0.479249710983165,0,0,0.868687840005475,1.84928690295345,0.179060963239896,0.112085143993527,0.788123040807709,2.37190332345469,0.513372145118994,2.28685161800217,2.60279707715243,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.49076596687656,1.00034104211935,0.271265023699736,1.24782516918484,1.24900292158013,1.10391690523754,1.05427273493442,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,1.03384013061444,1.50999940573032,0.74709290462411,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,1.15325234330131,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0,0.328508624055237,0,0.232420756919918,0,1.40354529212299,0.184161977871793,0.114814448164607,0,0.262248829918848,0,0.308061348417659,0,1.46139224653261,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0.769350375349168,0,0,1.23649213977267,3.38807019827871,2.39277549769705,0,0.650060246036521,0,0.580024309752732,0,0.15350367472613,0,1.28904293841928,2.46528379654188,0.340906509664404,0.267096106940212,0,0.384380134730212,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,1.116475108079,0,0,0,0,1.27281299170375,0,0.539617372749944,0.54907405947211,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0,0,0.286822704408103,0,0.3566710514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| |||
|short_description=p10@TRPS1 | |||
}} |
Revision as of 03:13, 14 September 2013
Short description: | p10@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TRPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_ENST00000519674_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | E5RJ97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.52e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.52e-30 | 42 |
defensive cell | 3.47e-29 | 48 |
phagocyte | 3.47e-29 | 48 |
macrophage dendritic cell progenitor | 5.67e-28 | 61 |
monopoietic cell | 3.84e-26 | 59 |
monocyte | 3.84e-26 | 59 |
monoblast | 3.84e-26 | 59 |
promonocyte | 3.84e-26 | 59 |
granulocyte monocyte progenitor cell | 4.58e-24 | 67 |
myeloid lineage restricted progenitor cell | 8.44e-22 | 66 |
myeloid leukocyte | 7.05e-21 | 72 |
nongranular leukocyte | 5.29e-15 | 115 |
myeloid cell | 9.90e-15 | 108 |
common myeloid progenitor | 9.90e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 5.18e-14 | 120 |
leukocyte | 7.40e-13 | 136 |
hematopoietic oligopotent progenitor cell | 3.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.06e-10 | 161 |
hematopoietic stem cell | 4.28e-10 | 168 |
hematopoietic cell | 8.37e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.86e-22 | 82 |
bone marrow | 2.72e-21 | 76 |
skeletal element | 8.42e-20 | 90 |
hematopoietic system | 3.22e-18 | 98 |
blood island | 3.22e-18 | 98 |
skeletal system | 7.02e-18 | 100 |
immune system | 3.26e-17 | 93 |
hemolymphoid system | 8.73e-16 | 108 |
musculoskeletal system | 1.74e-09 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.