FFCP PHASE1:Mm9::chr3:9886725..9886732,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:9886725..9886732,-|id=chr3:9886725..9886732,-|ontology_enrichment_celltype=CL:0002027!1.86e-12!3;CL:0002006!1.86e-12!3;CL:0002024!1.86e-12!3;CL:0000355!1.46e-09!9|ontology_enrichment_celltype_v019_2=CL:0000355,1.13e-10,9|ontology_enrichment_disease=DOID:0060100!2.53e-27!3;DOID:4045!2.53e-27!3;DOID:0050686!4.99e-14!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.10e-29,3;DOID:4045,1.10e-29,3;DOID:0050686,1.87e-15,6|ontology_enrichment_uberon=UBERON:0001134!1.46e-09!9;UBERON:0002036!1.46e-09!9;UBERON:0002385!1.46e-09!9;UBERON:0000486!1.46e-09!9;UBERON:0001015!1.46e-09!9;UBERON:0004290!1.46e-09!9;UBERON:0003082!1.46e-09!9;UBERON:0000383!1.16e-08!10;UBERON:0002329!6.32e-08!11;UBERON:0003077!6.32e-08!11;UBERON:0003059!6.32e-08!11;UBERON:0007282!6.32e-08!11;UBERON:0009618!6.32e-08!11;UBERON:0007285!6.32e-08!11;UBERON:0002204!5.75e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.13e-10,9;UBERON:0002036,1.13e-10,9;UBERON:0002385,1.13e-10,9;UBERON:0000486,1.13e-10,9;UBERON:0007503,1.13e-10,9;UBERON:0001015,1.13e-10,9;UBERON:0002329,1.13e-10,9;UBERON:0003082,1.13e-10,9;UBERON:0003059,1.13e-10,9;UBERON:0007282,1.13e-10,9;UBERON:0004290,1.13e-10,9;UBERON:0009618,1.13e-10,9;UBERON:0000383,1.03e-09,10;UBERON:0007524,6.35e-09,11;UBERON:0003077,6.35e-09,11;UBERON:0007285,6.35e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.906676722619,0.523523743973798,28.8233429135197,2.73218193983378,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:9886725..9886732,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:9886725..9886732,- | |||
|id=chr3:9886725..9886732,- | |||
|ontology_enrichment_celltype=CL:0002027!1.86e-12!3;CL:0002006!1.86e-12!3;CL:0002024!1.86e-12!3;CL:0000355!1.46e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.13e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.53e-27!3;DOID:4045!2.53e-27!3;DOID:0050686!4.99e-14!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.10e-29,3;DOID:4045,1.10e-29,3;DOID:0050686,1.87e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.46e-09!9;UBERON:0002036!1.46e-09!9;UBERON:0002385!1.46e-09!9;UBERON:0000486!1.46e-09!9;UBERON:0001015!1.46e-09!9;UBERON:0004290!1.46e-09!9;UBERON:0003082!1.46e-09!9;UBERON:0000383!1.16e-08!10;UBERON:0002329!6.32e-08!11;UBERON:0003077!6.32e-08!11;UBERON:0003059!6.32e-08!11;UBERON:0007282!6.32e-08!11;UBERON:0009618!6.32e-08!11;UBERON:0007285!6.32e-08!11;UBERON:0002204!5.75e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.13e-10,9;UBERON:0002036,1.13e-10,9;UBERON:0002385,1.13e-10,9;UBERON:0000486,1.13e-10,9;UBERON:0007503,1.13e-10,9;UBERON:0001015,1.13e-10,9;UBERON:0002329,1.13e-10,9;UBERON:0003082,1.13e-10,9;UBERON:0003059,1.13e-10,9;UBERON:0007282,1.13e-10,9;UBERON:0004290,1.13e-10,9;UBERON:0009618,1.13e-10,9;UBERON:0000383,1.03e-09,10;UBERON:0007524,6.35e-09,11;UBERON:0003077,6.35e-09,11;UBERON:0007285,6.35e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.906676722619,0.523523743973798,28.8233429135197,2.73218193983378,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:9886725..9886732,- | |||
}} |
Revision as of 03:12, 14 September 2013
Short description: | p@chr3:9886725..9886732, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:9886725..9886732, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.13e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.13e-10 | 9 |
striated muscle tissue | 1.13e-10 | 9 |
muscle tissue | 1.13e-10 | 9 |
multilaminar epithelium | 1.13e-10 | 9 |
epithelial vesicle | 1.13e-10 | 9 |
musculature | 1.13e-10 | 9 |
somite | 1.13e-10 | 9 |
myotome | 1.13e-10 | 9 |
presomitic mesoderm | 1.13e-10 | 9 |
presumptive segmental plate | 1.13e-10 | 9 |
dermomyotome | 1.13e-10 | 9 |
trunk paraxial mesoderm | 1.13e-10 | 9 |
musculature of body | 1.03e-09 | 10 |
dense mesenchyme tissue | 6.35e-09 | 11 |
paraxial mesoderm | 6.35e-09 | 11 |
presumptive paraxial mesoderm | 6.35e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.10e-29 | 3 |
muscle cancer | 1.10e-29 | 3 |
organ system cancer | 1.87e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.