FFCP PHASE1:Mm9::chr3:96531582..96531649,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67845|HGNC=|MCL_coexpression_id=1382|UniProt=Q9D0C1|association_with_transcript=48bp_to_ENSMUST00000029740,NM_026406,uc008qoe.2,uc012cuc.1_5end|description=CAGE_peak_1_at_Rnf115_5end|id=chr3:96531582..96531649,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.31e-13!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.31e-13,51|phase1_expression=22.1005409004616,51.6483603306254,54.5999087267443,53.8386296126157,42.5761370454395,25.6855286025191,22.1932008565749,27.3741445696142,46.6010670322017,44.0041309485348,17.977886663678,18.6666852049087,34.2401459862411,33.044912114381,21.6521345180181,34.8257459910501,30.7807226376385,32.1771408665402,26.7373145531191,34.7999514474385,32.3164502574065,30.0851582138682,26.3811787030325,23.8388709962176,29.1349786955306,46.5127890933166,41.3531516312712,37.0610520219729,34.58426234106,49.6499355627064,33.9247681302616,12.7006134691926,7.38077745101484,0,17.3310971850765,22.607911768755,18.9877501324003,122.629767805914,109.386948233332,98.4224638670741,115.88160314211,94.943322409224,100.500643077449,20.1434908760924,22.1001710058542,24.9623582939887,22.6893489860931,20.9304150125229,17.5748946187577,26.2480363750283,32.1968769738334,18.6878333674463,37.9188689690484,48.5992635147601,43.3561000893779,19.8089765747679,25.2149427146106,23.7209162447623,23.2663929988537,21.6886301501533,22.8179305262225,16.6033820713875,24.0109594950008,26.996991518442,16.8107281636386,17.7620028736525,17.6764065205859,19.2109152660777,15.2423730093462,12.0155285115205,15.5640471400023,39.7054868321287,34.8972294703549,18.3736198822431,18.9774032616108,12.8690630125403,19.82085857989,43.541382287049,48.0788449092042,25.849712395118,26.1654660702892,28.6502353806218,37.4105218661851,37.1423322620909,37.8939654486489,31.5252586456824,32.4607432221955,29.8239113320481,33.8496084199333,37.332350692752,60.291813649949,36.9982267101996,45.5580793584193,30.2233787317178,31.8390444549358,30.9138552097162,25.9822177243741,21.1333599996792,15.0675882669664,18.3736578745377,19.2955485094052,17.9657068380045,20.3844191765317,35.5533351576666,14.0719176657289,16.9751109868316,12.1325866803548,31.1721991633034,88.0388804400384,31.4697334817428,17.3485326766136,17.0500667854799,17.0655467969483,18.0867168663147,24.9288059127694,26.8926505445506,33.1241256764061,34.2700475900191,60.1535175325915,23.9414937922166,31.1386541029155,27.6378894287077,46.5979403045305,42.1604347696628,41.889341362691,51.6023251521355,28.2763693833972,16.7972764678154,25.541115641686,39.2451475240635,37.5150494311274,17.2146462394624,52.842593338452,53.7002460393694,47.5834622041393,42.182728397617,21.4881057724167,28.115975357881,32.8539585963777,36.1959992124735,21.5999935318088,21.6107978167465,22.8678904852794,25.921228667743,21.159351236063,27.8006773018124,23.6128345890517,31.3031078594209,20.9100953144857,21.936305299467,18.6508191613786,15.1245055375027,18.0730711996639,16.0195996600197,15.0220959577799,22.2918378836712,28.7907406798426,27.0215302470451,27.8480229407681,25.8907215669377,26.0323926579017,19.8068267607116,26.0419209143731,24.2020005049307,18.8205877722601,22.78832658554,16.3646774853768,27.556620798652,23.2029388378007,21.6701052584406,24.5638492923943,22.0761981012252,21.9550115291051,23.3519168643047,41.2168299185689,15.9502149187891,71.0400383415166,39.9320355661952,23.4617075588757,20.2045904518582,17.6548422011268,23.1936053316844,30.6881700505921,31.1970026824597,41.758557415917,33.4338878089742,38.202951737641,37.2048602716952,37.0431765526328,26.9645822596266,32.2045694313294,41.0231022903996,17.0701110857774,23.3066965723847,20.2873924211545,21.383389423758,24.4380133831208,24.1267220422696,27.6976032604247,33.0646731474309,35.0107163086266,28.5047448659359,29.0523574545406,19.6877224744991,22.8008434331315,20.9121764517914,27.9946967516134,25.5647789337562,28.518095399519,30.4957905697859,26.4280419643308,27.1815799056201,27.3159592401974,26.7941482321322,24.6509761760503,31.0672019874947,33.3679189150757,26.0519501536218,39.5371826956534,20.4650724712124,24.6077114427459,18.6719594352707,22.7649540839847,24.6234198439469,21.6619713206272,28.2943789393808,27.7437853626896,30.7835918611797,29.9774965076076,34.2474327755892,34.5369963731791,37.7534042897745,52.7769493787453,65.8125877420639,26.555270743028,33.9402197954821,43.0275581167282,45.1264993379982,18.0328439914343,25.752034574846,38.4920027687833,32.7968545209176,35.1140138304462,42.7754148335068,33.6425997864415,38.2153316564924,36.4329631507405,35.9474705230914,39.9240655725989,45.6276269318966,29.5235377233199,16.3820355373875,19.8722090411363,31.8392337336993,41.1509928853885,14.8096188054539,19.6510312027088,21.6895841719283,21.2617362874156,26.1319875752338,26.876542489495,21.8120237686503,21.746340081468,26.8631244245444,30.5713964867496,25.7838858120467,37.4483566329167,21.78739237778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| ||
|EntrezGene=67845 | |||
|HGNC= | |||
|MCL_coexpression_id=1382 | |||
|UniProt=Q9D0C1 | |||
|association_with_transcript=48bp_to_ENSMUST00000029740,NM_026406,uc008qoe.2,uc012cuc.1_5end | |||
|description=CAGE_peak_1_at_Rnf115_5end | |||
|id=chr3:96531582..96531649,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-13!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.31e-13,51 | |||
|phase1_expression=22.1005409004616,51.6483603306254,54.5999087267443,53.8386296126157,42.5761370454395,25.6855286025191,22.1932008565749,27.3741445696142,46.6010670322017,44.0041309485348,17.977886663678,18.6666852049087,34.2401459862411,33.044912114381,21.6521345180181,34.8257459910501,30.7807226376385,32.1771408665402,26.7373145531191,34.7999514474385,32.3164502574065,30.0851582138682,26.3811787030325,23.8388709962176,29.1349786955306,46.5127890933166,41.3531516312712,37.0610520219729,34.58426234106,49.6499355627064,33.9247681302616,12.7006134691926,7.38077745101484,0,17.3310971850765,22.607911768755,18.9877501324003,122.629767805914,109.386948233332,98.4224638670741,115.88160314211,94.943322409224,100.500643077449,20.1434908760924,22.1001710058542,24.9623582939887,22.6893489860931,20.9304150125229,17.5748946187577,26.2480363750283,32.1968769738334,18.6878333674463,37.9188689690484,48.5992635147601,43.3561000893779,19.8089765747679,25.2149427146106,23.7209162447623,23.2663929988537,21.6886301501533,22.8179305262225,16.6033820713875,24.0109594950008,26.996991518442,16.8107281636386,17.7620028736525,17.6764065205859,19.2109152660777,15.2423730093462,12.0155285115205,15.5640471400023,39.7054868321287,34.8972294703549,18.3736198822431,18.9774032616108,12.8690630125403,19.82085857989,43.541382287049,48.0788449092042,25.849712395118,26.1654660702892,28.6502353806218,37.4105218661851,37.1423322620909,37.8939654486489,31.5252586456824,32.4607432221955,29.8239113320481,33.8496084199333,37.332350692752,60.291813649949,36.9982267101996,45.5580793584193,30.2233787317178,31.8390444549358,30.9138552097162,25.9822177243741,21.1333599996792,15.0675882669664,18.3736578745377,19.2955485094052,17.9657068380045,20.3844191765317,35.5533351576666,14.0719176657289,16.9751109868316,12.1325866803548,31.1721991633034,88.0388804400384,31.4697334817428,17.3485326766136,17.0500667854799,17.0655467969483,18.0867168663147,24.9288059127694,26.8926505445506,33.1241256764061,34.2700475900191,60.1535175325915,23.9414937922166,31.1386541029155,27.6378894287077,46.5979403045305,42.1604347696628,41.889341362691,51.6023251521355,28.2763693833972,16.7972764678154,25.541115641686,39.2451475240635,37.5150494311274,17.2146462394624,52.842593338452,53.7002460393694,47.5834622041393,42.182728397617,21.4881057724167,28.115975357881,32.8539585963777,36.1959992124735,21.5999935318088,21.6107978167465,22.8678904852794,25.921228667743,21.159351236063,27.8006773018124,23.6128345890517,31.3031078594209,20.9100953144857,21.936305299467,18.6508191613786,15.1245055375027,18.0730711996639,16.0195996600197,15.0220959577799,22.2918378836712,28.7907406798426,27.0215302470451,27.8480229407681,25.8907215669377,26.0323926579017,19.8068267607116,26.0419209143731,24.2020005049307,18.8205877722601,22.78832658554,16.3646774853768,27.556620798652,23.2029388378007,21.6701052584406,24.5638492923943,22.0761981012252,21.9550115291051,23.3519168643047,41.2168299185689,15.9502149187891,71.0400383415166,39.9320355661952,23.4617075588757,20.2045904518582,17.6548422011268,23.1936053316844,30.6881700505921,31.1970026824597,41.758557415917,33.4338878089742,38.202951737641,37.2048602716952,37.0431765526328,26.9645822596266,32.2045694313294,41.0231022903996,17.0701110857774,23.3066965723847,20.2873924211545,21.383389423758,24.4380133831208,24.1267220422696,27.6976032604247,33.0646731474309,35.0107163086266,28.5047448659359,29.0523574545406,19.6877224744991,22.8008434331315,20.9121764517914,27.9946967516134,25.5647789337562,28.518095399519,30.4957905697859,26.4280419643308,27.1815799056201,27.3159592401974,26.7941482321322,24.6509761760503,31.0672019874947,33.3679189150757,26.0519501536218,39.5371826956534,20.4650724712124,24.6077114427459,18.6719594352707,22.7649540839847,24.6234198439469,21.6619713206272,28.2943789393808,27.7437853626896,30.7835918611797,29.9774965076076,34.2474327755892,34.5369963731791,37.7534042897745,52.7769493787453,65.8125877420639,26.555270743028,33.9402197954821,43.0275581167282,45.1264993379982,18.0328439914343,25.752034574846,38.4920027687833,32.7968545209176,35.1140138304462,42.7754148335068,33.6425997864415,38.2153316564924,36.4329631507405,35.9474705230914,39.9240655725989,45.6276269318966,29.5235377233199,16.3820355373875,19.8722090411363,31.8392337336993,41.1509928853885,14.8096188054539,19.6510312027088,21.6895841719283,21.2617362874156,26.1319875752338,26.876542489495,21.8120237686503,21.746340081468,26.8631244245444,30.5713964867496,25.7838858120467,37.4483566329167,21.7873923777885,19.1450851998477,19.9333442579381,33.8719846256743,25.6851097346982,23.8596079873075,15.22324745573,33.5580542531106,43.637406597947,36.3871856790687,22.7543029059242,24.8655217111695,21.3507754245672,17.3089898804548,16.5782308742512,37.6010279252507,52.1045098649532,34.6867888019641,17.5428837768739,23.7048995033231,32.0226376907975,36.3606645737927,32.0289442489132,24.4768939191152,26.0309701322004,24.8759952847963,27.6854479224383,25.1487114897003,18.7053909756701,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| |||
|short_description=p1@Rnf115 | |||
}} | |||
Revision as of 03:09, 14 September 2013
| Short description: | p1@Rnf115 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rnf115_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1382 |
| Association with transcript: | 48bp_to_ENSMUST00000029740, NM_026406, uc008qoe.2, uc012cuc.1_5end |
| EntrezGene: | Rnf115 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 3.31e-13 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
