FFCP PHASE1:Hg19::chr8:105235572..105235610,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9699|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17283|TSSclassifier=S|UniProt=E5RI36|association_with_transcript=0bp_to_ENST00000523362_5end|coexpression_cluster_id=C136|description=CAGE_peak_4_at_RIMS2_5end|id=chr8:105235572..105235610,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002566;7.75e-07;1|ontology_enrichment_celltype_v019_2=CL:0002566,7.35e-07,1|ontology_enrichment_development_v019=UBERON:0000358;9.91e-07;1!UBERON:0004874;9.91e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2355;5.88e-07;1|ontology_enrichment_disease_v019_2=DOID:2355,5.90e-07,1|ontology_enrichment_uberon=UBERON:0001049!7.59e-27!57;UBERON:0005068!7.59e-27!57;UBERON:0006241!7.59e-27!57;UBERON:0007135!7.59e-27!57;UBERON:0005743!3.32e-25!86;UBERON:0001017!1.06e-24!82;UBERON:0000073!1.60e-24!94;UBERON:0001016!1.60e-24!94;UBERON:0002616!7.81e-24!59;UBERON:0003075!5.75e-23!86;UBERON:0007284!5.75e-23!86;UBERON:0002346!2.35e-22!90;UBERON:0000153!4.85e-22!129;UBERON:0007811!4.85e-22!129;UBERON:0004121!6.68e-22!169;UBERON:0000924!1.02e-21!173;UBERON:0006601!1.02e-21!173;UBERON:0002780!1.95e-21!41;UBERON:0001890!1.95e-21!41;UBERON:0006240!1.95e-21!41;UBERON:0003080!1.12e-20!42;UBERON:0000033!1.19e-20!123;UBERON:0000955!2.87e-20!69;UBERON:0006238!2.87e-20!69;UBERON:0003056!1.14e-19!61;UBERON:0007023!4.46e-19!115;UBERON:0001893!1.79e-18!34;UBERON:0001869!1.93e-18!32;UBERON:0002020!4.05e-18!34;UBERON:0003528!4.05e-18!34;UBERON:0002791!2.32e-17!33;UBERON:0001950!2.66e-15!20;UBERON:0002619!3.05e-15!22;UBERON:0000956!3.36e-14!25;UBERON:0000203!3.36e-14!25;UBERON:0000475!1.40e-11!365;UBERON:0000064!2.05e-09!219;UBERON:0000200!3.47e-08!6;UBERON:0003076!2.39e-07!15;UBERON:0003057!2.39e-07!15;UBERON:0001871!3.82e-07!7|ontology_enrichment_uberon_v019=UBERON:0001950;4.43e-18;20!UBERON:0001872;2.11e-16;5!UBERON:0002619;2.23e-16;22!UBERON:0001869;6.23e-16;32!UBERON:0000956;2.59e-14;25!UBERON:0000203;2.59e-14;25!UBERON:0002780;7.44e-14;41!UBERON:0001890;7.44e-14;41!UBERON:0002791;8.50e-13;32!UBERON:0001893;9.76e-13;34!UBERON:0003528;9.00e-12;34!UBERON:0002020;9.00e-12;34!UBERON:0000073;1.28e-11;53!UBERON:0002616;1.28e-11;53!UBERON:0000200;2.34e-08;6!UBERON:0001870;1.11e-07;3!UBERON:0001016;4.99e-07;83!UBERON:0007190;7.75e-07;1!UBERON:0002022;9.91e-07;1!UBERON:0000989;9.91e-07;1!UBERON:0008811;9.91e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.07e-19,56;UBERON:0005068,2.07e-19,56;UBERON:0006241,2.07e-19,56;UBERON:0007135,2.07e-19,56;UBERON:0001950,2.19e-18,20;UBERON:0000073,4.66e-18,53;UBERON:0002616,4.66e-18,53;UBERON:0002780,7.17e-18,41;UBERON:0001890,7.17e-18,41;UBERON:0003080,7.17e-18,41;UBERON:0006240,7.17e-18,41;UBERON:0001869,8.17e-17,32;UBERON:0002619,1.18e-16,22;UBERON:0001872,1.54e-16,5;UBERON:0001017,7.36e-16,81;UBERON:0001893,9.88e-16,34;UBERON:0000955,3.64e-15,68;UBERON:0006238,3.64e-15,68;UBERON:0000956,1.48e-14,25;UBERON:0000203,1.48e-14,25;UBERON:0001016,6.34e-14,89;UBERON:0002791,9.37e-14,32;UBERON:0003528,7.27e-13,34;UBERON:0002020,7.27e-13,34;UBERON:0003075,2.99e-12,82;UBERON:0007284,2.99e-12,82;UBERON:0007023,4.45e-12,114;UBERON:0002346,1.57e-11,86;UBERON:0003056,3.01e-11,61;UBERON:0010371,2.49e-10,104;UBERON:0000200,1.69e-08,6;UBERON:0004121,3.13e-08,171;UBERON:0000924,3.13e-08,171;UBERON:0006601,3.13e-08,171;UBERON:0001870,5.80e-08,3;UBERON:0010314,2.08e-07,132;UBERON:0007190,8.21e-07,1;UBERON:0000989,8.67e-07,1;UBERON:0008811,8.67e-07,1;UBERON:0006258,8.67e-07,1;UBERON:0005876,8.67e-07,1;UBERON:0004874,8.67e-07,1|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,4.00293193412522,0.446961094427288,0,0,0,0,0,0,1.09220686065086,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0.109750285408626,0,0,0.462942225792648,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0.503946384596579,0.850650583454319,0.53735113621709,0,0.766765358330422,0,0,0,0,0,3.87337155182231,1.52795370223311,0,0,0.308482478109971,0,0.571652865261156,0,0.43596006883328,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25409462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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |||
|TSSclassifier=S | |||
|UniProt=E5RI36 | |||
|association_with_transcript=0bp_to_ENST00000523362_5end | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_4_at_RIMS2_5end | |||
|id=chr8:105235572..105235610,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002566;7.75e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,7.35e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.91e-07;1!UBERON:0004874;9.91e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;5.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.59e-27!57;UBERON:0005068!7.59e-27!57;UBERON:0006241!7.59e-27!57;UBERON:0007135!7.59e-27!57;UBERON:0005743!3.32e-25!86;UBERON:0001017!1.06e-24!82;UBERON:0000073!1.60e-24!94;UBERON:0001016!1.60e-24!94;UBERON:0002616!7.81e-24!59;UBERON:0003075!5.75e-23!86;UBERON:0007284!5.75e-23!86;UBERON:0002346!2.35e-22!90;UBERON:0000153!4.85e-22!129;UBERON:0007811!4.85e-22!129;UBERON:0004121!6.68e-22!169;UBERON:0000924!1.02e-21!173;UBERON:0006601!1.02e-21!173;UBERON:0002780!1.95e-21!41;UBERON:0001890!1.95e-21!41;UBERON:0006240!1.95e-21!41;UBERON:0003080!1.12e-20!42;UBERON:0000033!1.19e-20!123;UBERON:0000955!2.87e-20!69;UBERON:0006238!2.87e-20!69;UBERON:0003056!1.14e-19!61;UBERON:0007023!4.46e-19!115;UBERON:0001893!1.79e-18!34;UBERON:0001869!1.93e-18!32;UBERON:0002020!4.05e-18!34;UBERON:0003528!4.05e-18!34;UBERON:0002791!2.32e-17!33;UBERON:0001950!2.66e-15!20;UBERON:0002619!3.05e-15!22;UBERON:0000956!3.36e-14!25;UBERON:0000203!3.36e-14!25;UBERON:0000475!1.40e-11!365;UBERON:0000064!2.05e-09!219;UBERON:0000200!3.47e-08!6;UBERON:0003076!2.39e-07!15;UBERON:0003057!2.39e-07!15;UBERON:0001871!3.82e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.43e-18;20!UBERON:0001872;2.11e-16;5!UBERON:0002619;2.23e-16;22!UBERON:0001869;6.23e-16;32!UBERON:0000956;2.59e-14;25!UBERON:0000203;2.59e-14;25!UBERON:0002780;7.44e-14;41!UBERON:0001890;7.44e-14;41!UBERON:0002791;8.50e-13;32!UBERON:0001893;9.76e-13;34!UBERON:0003528;9.00e-12;34!UBERON:0002020;9.00e-12;34!UBERON:0000073;1.28e-11;53!UBERON:0002616;1.28e-11;53!UBERON:0000200;2.34e-08;6!UBERON:0001870;1.11e-07;3!UBERON:0001016;4.99e-07;83!UBERON:0007190;7.75e-07;1!UBERON:0002022;9.91e-07;1!UBERON:0000989;9.91e-07;1!UBERON:0008811;9.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.07e-19,56;UBERON:0005068,2.07e-19,56;UBERON:0006241,2.07e-19,56;UBERON:0007135,2.07e-19,56;UBERON:0001950,2.19e-18,20;UBERON:0000073,4.66e-18,53;UBERON:0002616,4.66e-18,53;UBERON:0002780,7.17e-18,41;UBERON:0001890,7.17e-18,41;UBERON:0003080,7.17e-18,41;UBERON:0006240,7.17e-18,41;UBERON:0001869,8.17e-17,32;UBERON:0002619,1.18e-16,22;UBERON:0001872,1.54e-16,5;UBERON:0001017,7.36e-16,81;UBERON:0001893,9.88e-16,34;UBERON:0000955,3.64e-15,68;UBERON:0006238,3.64e-15,68;UBERON:0000956,1.48e-14,25;UBERON:0000203,1.48e-14,25;UBERON:0001016,6.34e-14,89;UBERON:0002791,9.37e-14,32;UBERON:0003528,7.27e-13,34;UBERON:0002020,7.27e-13,34;UBERON:0003075,2.99e-12,82;UBERON:0007284,2.99e-12,82;UBERON:0007023,4.45e-12,114;UBERON:0002346,1.57e-11,86;UBERON:0003056,3.01e-11,61;UBERON:0010371,2.49e-10,104;UBERON:0000200,1.69e-08,6;UBERON:0004121,3.13e-08,171;UBERON:0000924,3.13e-08,171;UBERON:0006601,3.13e-08,171;UBERON:0001870,5.80e-08,3;UBERON:0010314,2.08e-07,132;UBERON:0007190,8.21e-07,1;UBERON:0000989,8.67e-07,1;UBERON:0008811,8.67e-07,1;UBERON:0006258,8.67e-07,1;UBERON:0005876,8.67e-07,1;UBERON:0004874,8.67e-07,1 | |||
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|short_description=p4@RIMS2 | |||
}} |
Revision as of 03:02, 14 September 2013
Short description: | p4@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RIMS2_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000523362_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E5RI36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 7.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.90e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.