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FFCP PHASE1:Mm9::chr3:87710530..87710559,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=15191|HGNC=|MCL_coexpression_id=0|UniProt=E0CXA0|association_with_transcript=-212bp_to_ENSMUST00000159492_5end|description=CAGE_peak_4_at_Hdgf_5end|id=chr3:87710530..87710559,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.27e-12!63;UBERON:0002616!2.09e-11!49;UBERON:0007811!3.10e-11!86;UBERON:0000955!5.78e-11!50;UBERON:0006238!5.78e-11!50;UBERON:0001049!2.35e-10!52;UBERON:0005068!2.35e-10!52;UBERON:0006241!2.35e-10!52;UBERON:0007135!2.35e-10!52;UBERON:0000073!2.36e-10!75;UBERON:0001016!2.36e-10!75;UBERON:0000153!2.86e-10!94;UBERON:0004121!4.52e-10!102;UBERON:0000924!4.52e-10!102;UBERON:0006601!4.52e-10!102;UBERON:0001017!6.13e-10!73;UBERON:0005743!6.13e-10!73;UBERON:0003056!8.60e-09!49;UBERON:0003080!3.67e-08!40;UBERON:0002780!7.62e-08!39;UBERON:0001890!7.62e-08!39;UBERON:0006240!7.62e-08!39;UBERON:0002346!7.73e-08!71;UBERON:0003075!7.73e-08!71;UBERON:0007284!7.73e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.41e-11,95;UBERON:0000924,2.41e-11,95;UBERON:0006601,2.41e-11,95;UBERON:0002616,1.19e-10,46;UBERON:0000955,3.26e-10,47;UBERON:0006238,3.26e-10,47;UBERON:0000073,3.44e-10,54;UBERON:0001049,5.45e-10,52;UBERON:0005068,5.45e-10,52;UBERON:0006241,5.45e-10,52;UBERON:0007135,5.45e-10,52;UBERON:0010371,5.63e-10,73;UBERON:0001016,7.48e-10,75;UBERON:0002346,1.62e-09,64;UBERON:0003075,1.62e-09,64;UBERON:0007284,1.62e-09,64;UBERON:0001017,1.92e-09,73;UBERON:0003056,1.58e-08,49;UBERON:0003080,5.53e-08,40;UBERON:0002780,1.15e-07,39;UBERON:0001890,1.15e-07,39;UBERON:0006240,1.15e-07,39|phase1_expression=1.44133962394315,0.697950815278722,0,0,1.00179145989269,1.00727563147134,0.467225281191051,0.516493293766305,5.20918271961167,4.91535505276186,1.19852577757853,1.7549874978974,1.71200729931206,0.961624426608971,0.666219523631325,1.61980213911861,1.39912375625629,1.26184866143295,0.274228867211478,0.84877930359606,15.3928355173436,2.58156473122302,3.91799683708403,1.59992422793407,1.37645568640302,0,0,0.646413698057667,1.33016393619462,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.612508068787107,0.418531630736908,0,1.57057123192139,1.76469446409304,0,0.485510353031154,2.26614272356039,1.92616169317078,1.65192076945513,3.12956537739216,5.45062890951116,8.34807494390993,5.8328969722285,3.21968769738334,8.62515386189829,1.51004345451963,2.90144856804538,6.72187598284928,2.05807548828758,1.14613375975503,0.515672092277442,1.21389876515759,3.1739458756322,1.90149421051854,1.0165335962074,6.22506357277798,1.3498495759221,1.97773272513395,3.5524005747305,3.89480143673926,8.06858441175265,2.07379224616955,3.10513658162888,2.73422449756797,3.42781181284564,2.65042249141936,0.979926393719632,1.62937300731002,0.919218786610021,2.20231761998777,2.29837208553338,3.68655679814984,2.50583946687368,2.19570344645783,1.56274011167028,3.07101298901519,3.37657566019008,2.44477196442896,0.883885756421003,1.70846016958924,0.931997229126503,2.19605960666234,3.24957708459178,1.73918693221007,0.860423876981386,4.75979933595425,2.15881276655127,3.24888208723835,0,5.19644354487482,4.94247935476367,2.85764605063156,1.7666978725517,2.39433813620357,2.56652954828636,2.54805239706646,0,1.73192832808971,1.52015919285059,2.02209778005913,4.11061966988616,0.517875767294343,0.29688427812965,0.693941307064543,0.913396434936424,1.61430848079241,0.753613202763113,1.88141931417128,2.51333182659351,0.988779870937496,2.16899035379867,3.5384422077995,3.558870698843,6.40440403535141,2.42437626567611,0,4.9772735491963,3.77004072264219,0.766371165625774,3.59445373517761,1.79970819298022,2.92261522268049,3.14560342750128,2.28750301409313,2.01046963380583,3.65031072403781,3.3243009452943,4.1557608911912,3.0825839982874,1.83310854930569,2.98576729464223,2.27450482590307,3.15662783829711,2.99277018814219,0.919608417733892,2.34080768746954,1.65775299619287,2.24520447199382,2.43416068541215,2.06143794031403,4.39795730256327,1.72454394346274,0.756424320671277,2.11141348996739,1.97276159184817,1.11218899690239,2.43776516565517,3.2925141825271,0.796137067273973,2.1066395619397,2.83082697826187,3.6941254921427,0.828503090142008,1.64168241986767,0.900310307305074,0.946978942340841,1.37734962223183,1.23413690309903,2.32533944750408,1.87791380979733,0.700592054203017,3.12663714835613,0.985004784474571,3.08061476274252,4.23979963533464,2.41505126820156,3.89198614405078,3.36463917702604,4.42489833230923,0.330418782983798,1.32225283331772,1.2797295032114,0.232236671860439,1.28867461322093,1.00841762311671,0.667134131534611,1.14135375667535,0,0.823494773620054,1.25667604400135,0.795825888164603,1.36474860983384,0,1.08069024937347,0.995706366271836,2.0863469104839,1.5994791765362,1.1270773567308,1.4255592949172,0.969762435838129,1.82353131714828,2.21327879934901,2.65698266363284,3.1399745568275,3.94870924549762,0.889357881261447,1.16791574001266,1.17935397067922,0.899448449539415,1.825741092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|EntrezGene=15191
|HGNC=
|MCL_coexpression_id=0
|UniProt=E0CXA0
|association_with_transcript=-212bp_to_ENSMUST00000159492_5end
|description=CAGE_peak_4_at_Hdgf_5end
|id=chr3:87710530..87710559,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.27e-12!63;UBERON:0002616!2.09e-11!49;UBERON:0007811!3.10e-11!86;UBERON:0000955!5.78e-11!50;UBERON:0006238!5.78e-11!50;UBERON:0001049!2.35e-10!52;UBERON:0005068!2.35e-10!52;UBERON:0006241!2.35e-10!52;UBERON:0007135!2.35e-10!52;UBERON:0000073!2.36e-10!75;UBERON:0001016!2.36e-10!75;UBERON:0000153!2.86e-10!94;UBERON:0004121!4.52e-10!102;UBERON:0000924!4.52e-10!102;UBERON:0006601!4.52e-10!102;UBERON:0001017!6.13e-10!73;UBERON:0005743!6.13e-10!73;UBERON:0003056!8.60e-09!49;UBERON:0003080!3.67e-08!40;UBERON:0002780!7.62e-08!39;UBERON:0001890!7.62e-08!39;UBERON:0006240!7.62e-08!39;UBERON:0002346!7.73e-08!71;UBERON:0003075!7.73e-08!71;UBERON:0007284!7.73e-08!71
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.41e-11,95;UBERON:0000924,2.41e-11,95;UBERON:0006601,2.41e-11,95;UBERON:0002616,1.19e-10,46;UBERON:0000955,3.26e-10,47;UBERON:0006238,3.26e-10,47;UBERON:0000073,3.44e-10,54;UBERON:0001049,5.45e-10,52;UBERON:0005068,5.45e-10,52;UBERON:0006241,5.45e-10,52;UBERON:0007135,5.45e-10,52;UBERON:0010371,5.63e-10,73;UBERON:0001016,7.48e-10,75;UBERON:0002346,1.62e-09,64;UBERON:0003075,1.62e-09,64;UBERON:0007284,1.62e-09,64;UBERON:0001017,1.92e-09,73;UBERON:0003056,1.58e-08,49;UBERON:0003080,5.53e-08,40;UBERON:0002780,1.15e-07,39;UBERON:0001890,1.15e-07,39;UBERON:0006240,1.15e-07,39
|phase1_expression=1.44133962394315,0.697950815278722,0,0,1.00179145989269,1.00727563147134,0.467225281191051,0.516493293766305,5.20918271961167,4.91535505276186,1.19852577757853,1.7549874978974,1.71200729931206,0.961624426608971,0.666219523631325,1.61980213911861,1.39912375625629,1.26184866143295,0.274228867211478,0.84877930359606,15.3928355173436,2.58156473122302,3.91799683708403,1.59992422793407,1.37645568640302,0,0,0.646413698057667,1.33016393619462,0,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.612508068787107,0.418531630736908,0,1.57057123192139,1.76469446409304,0,0.485510353031154,2.26614272356039,1.92616169317078,1.65192076945513,3.12956537739216,5.45062890951116,8.34807494390993,5.8328969722285,3.21968769738334,8.62515386189829,1.51004345451963,2.90144856804538,6.72187598284928,2.05807548828758,1.14613375975503,0.515672092277442,1.21389876515759,3.1739458756322,1.90149421051854,1.0165335962074,6.22506357277798,1.3498495759221,1.97773272513395,3.5524005747305,3.89480143673926,8.06858441175265,2.07379224616955,3.10513658162888,2.73422449756797,3.42781181284564,2.65042249141936,0.979926393719632,1.62937300731002,0.919218786610021,2.20231761998777,2.29837208553338,3.68655679814984,2.50583946687368,2.19570344645783,1.56274011167028,3.07101298901519,3.37657566019008,2.44477196442896,0.883885756421003,1.70846016958924,0.931997229126503,2.19605960666234,3.24957708459178,1.73918693221007,0.860423876981386,4.75979933595425,2.15881276655127,3.24888208723835,0,5.19644354487482,4.94247935476367,2.85764605063156,1.7666978725517,2.39433813620357,2.56652954828636,2.54805239706646,0,1.73192832808971,1.52015919285059,2.02209778005913,4.11061966988616,0.517875767294343,0.29688427812965,0.693941307064543,0.913396434936424,1.61430848079241,0.753613202763113,1.88141931417128,2.51333182659351,0.988779870937496,2.16899035379867,3.5384422077995,3.558870698843,6.40440403535141,2.42437626567611,0,4.9772735491963,3.77004072264219,0.766371165625774,3.59445373517761,1.79970819298022,2.92261522268049,3.14560342750128,2.28750301409313,2.01046963380583,3.65031072403781,3.3243009452943,4.1557608911912,3.0825839982874,1.83310854930569,2.98576729464223,2.27450482590307,3.15662783829711,2.99277018814219,0.919608417733892,2.34080768746954,1.65775299619287,2.24520447199382,2.43416068541215,2.06143794031403,4.39795730256327,1.72454394346274,0.756424320671277,2.11141348996739,1.97276159184817,1.11218899690239,2.43776516565517,3.2925141825271,0.796137067273973,2.1066395619397,2.83082697826187,3.6941254921427,0.828503090142008,1.64168241986767,0.900310307305074,0.946978942340841,1.37734962223183,1.23413690309903,2.32533944750408,1.87791380979733,0.700592054203017,3.12663714835613,0.985004784474571,3.08061476274252,4.23979963533464,2.41505126820156,3.89198614405078,3.36463917702604,4.42489833230923,0.330418782983798,1.32225283331772,1.2797295032114,0.232236671860439,1.28867461322093,1.00841762311671,0.667134131534611,1.14135375667535,0,0.823494773620054,1.25667604400135,0.795825888164603,1.36474860983384,0,1.08069024937347,0.995706366271836,2.0863469104839,1.5994791765362,1.1270773567308,1.4255592949172,0.969762435838129,1.82353131714828,2.21327879934901,2.65698266363284,3.1399745568275,3.94870924549762,0.889357881261447,1.16791574001266,1.17935397067922,0.899448449539415,1.82574109249653,1.68824011826692,2.29163266603278,1.43848068725405,0.810676133875177,0.549122826376163,1.43768206527355,1.86070473834252,1.24815069245824,1.51547326768267,1.25578189465339,2.8946611281802,1.10851914099963,0.37898282354097,1.30371981153621,2.37643120085263,1.17345124144251,1.00503754465089,0.476087281772027,2.34160377429359,1.89162172927429,1.10732344824387,1.43509291791738,1.47476983244164,1.55416483679306,0.723245292907558,0,1.08781136763742,1.96705709207614,0.827810238914197,3.69266356971921,4.10240903072711,3.11476396215683,10.3513080153793,0.94652465824877,1.56175497718655,1.50796378412959,2.62865677747807,1.78238939265915,0.849229592366497,0.809621403349789,2.04579100537918,1.97643888973262,1.28528526568723,1.98716119291576,2.49291845134157,1.14020871547503,1.64970122972535,2.65490276679926,1.21390318077491,2.11626489875326,1.13163047853539,1.47650946440386,0.614870295887855,1.03371317267288,1.81766864738753,1.06949213515416,1.8962205476149,2.10837217149998,1.03135543248187,3.40439605753788,1.98067203434441,1.81102157295856,1.71469628025274,2.30542303734956,2.14042581122485,2.63278432963394,2.43571959291679,2.58138878870081,0.21183207086382,2.20528398054962,2.80306630000516,2.58343082713449,2.47282992205439,2.38744688006273,3.28281799490123,0.874442509889552,3.52308073819968,1.36696704638282,1.44470807574256,2.22233432843654,2.26042148405629,1.50363650493128,0.686334519619568,3.73952545986482,4.19854356970974,3.86959926652387,1.90934123603023,1.10717597753397,1.42323626988794,0.86404272657441,1.04544148007234,1.9652630737156,1.07891477107857,1.32245529160537,2.87931536182433,1.16653475962614,1.86401793926078,102.592114840523,2.69129782879162,1.15820943319968,0.777804753376191,2.32487682259916,2.36538575687089,2.22978753426933,1.95306577265925,2.20204623293993,52.1821700984173,50.1172210888686,1.89606672376907,2.8381530140623,3.18403967210964,2.7283372825337,2.14832034800978,2.18549490259391,2.76449533895928,1.9199638532695,2.22126189885925,1.67654974641,2.11734988787365,1.36441033035653,1.15454209968395,0.818138315270983,4.76133805591944,0.665957860122194,1.97370484540847,2.3503846290971,2.51146472241848,1.68914227906064,1.46521299413812,1.50057865355346,1.00314420807073,4.51801474093653,5.52390283808612,4.01026859407578,2.40594455281163,4.11049511862385,3.0215755895588,3.37511250115903,3.60256962579376,4.53142408984205,2.07104124700728,1.55681021376265,1.19707462020309,1.53660245178721,2.67417388775123,1.67690530102386,1.2869045591501,2.66696073361938,1.44224540067226,2.24643446714271,2.77966932940177,2.28131369901216,0.754505365544305,2.06011316433741,1.79270426733634,1.7230640686684,1.42888107384922,1.39061191133827,1.15745532278223,0.824171801606613,1.03039244094078,2.05721551431249,1.95223386775271,0.953744759789284,1.88950341622027,2.1645157495526,2.03075058940024,2.37806364734604,1.57841826862706,1.90125759384206,1.68342681497322,1.18635018124174,1.87158516513571,0.818462086339379,1.54936841185966,1.73615949883027,1.24905288968973,1.40358965067245,2.57845264857958,2.10417165275728,4.63241980150983,3.94175320554716
|short_description=p4@Hdgf
}}

Revision as of 02:43, 14 September 2013

Short description:p4@Hdgf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hdgf_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -212bp_to_ENSMUST00000159492_5end
EntrezGene:Hdgf
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Hdgf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.35
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G5102.59
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H352.18
testis, neonate N30.CNhs11130.1391-42E250.12
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.41e-1195
ectoderm2.41e-1195
presumptive ectoderm2.41e-1195
regional part of brain1.19e-1046
brain3.26e-1047
future brain3.26e-1047
regional part of nervous system3.44e-1054
neural tube5.45e-1052
neural rod5.45e-1052
future spinal cord5.45e-1052
neural keel5.45e-1052
ecto-epithelium5.63e-1073
nervous system7.48e-1075
neurectoderm1.62e-0964
neural plate1.62e-0964
presumptive neural plate1.62e-0964
central nervous system1.92e-0973
pre-chordal neural plate1.58e-0849
anterior neural tube5.53e-0840
regional part of forebrain1.15e-0739
forebrain1.15e-0739
future forebrain1.15e-0739







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