FFCP PHASE1:Hg19::chr7:960494..960498,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11033|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16486|TSSclassifier=S|UniProt=F5H7V4|association_with_transcript=11bp_to_ENST00000538188_5end|coexpression_cluster_id=C164|description=CAGE_peak_19_at_ADAP1_5end|id=chr7:960494..960498,-|ontology_enrichment_celltype=CL:0002178!1.76e-21!3|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3|ontology_enrichment_development_v019=UBERON:0009117;6.56e-08;10!UBERON:0005564;6.56e-08;10|ontology_enrichment_disease=DOID:3493!3.35e-32!2;DOID:299!5.06e-22!25;DOID:3111!6.47e-17!1;DOID:3603!6.47e-17!1;DOID:3119!1.52e-10!14;DOID:4929!4.34e-09!2|ontology_enrichment_disease_v019=DOID:3493;4.61e-131;2!DOID:3111;4.66e-66;1!DOID:3603;4.66e-66;1!DOID:299;1.10e-24;25|ontology_enrichment_disease_v019_2=DOID:3493,4.61e-131,2;DOID:3111,4.66e-66,1;DOID:3603,4.66e-66,1;DOID:299,1.10e-24,25|ontology_enrichment_uberon=UBERON:0004913!7.57e-17!1;UBERON:0003703!7.57e-17!1;UBERON:0001174!7.57e-17!1;UBERON:0004914!7.57e-17!1;UBERON:0001154!1.21e-16!1;UBERON:0001153!1.21e-16!1;UBERON:0005409!1.18e-10!35;UBERON:0002294!8.35e-10!7;UBERON:0001173!8.35e-10!7;UBERON:0004912!8.35e-10!7;UBERON:0001873!7.49e-09!2;UBERON:0010122!7.49e-09!2;UBERON:0000945!1.17e-08!8;UBERON:0010039!1.17e-08!8|ontology_enrichment_uberon_v019=UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82785911099448,2.68219434960993,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p19@ADAP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=11033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16486 | |||
|TSSclassifier=S | |||
|UniProt=F5H7V4 | |||
|association_with_transcript=11bp_to_ENST00000538188_5end | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_19_at_ADAP1_5end | |||
|id=chr7:960494..960498,- | |||
|ontology_enrichment_celltype=CL:0002178!1.76e-21!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.56e-08;10!UBERON:0005564;6.56e-08;10 | |||
|ontology_enrichment_disease=DOID:3493!3.35e-32!2;DOID:299!5.06e-22!25;DOID:3111!6.47e-17!1;DOID:3603!6.47e-17!1;DOID:3119!1.52e-10!14;DOID:4929!4.34e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.61e-131;2!DOID:3111;4.66e-66;1!DOID:3603;4.66e-66;1!DOID:299;1.10e-24;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.61e-131,2;DOID:3111,4.66e-66,1;DOID:3603,4.66e-66,1;DOID:299,1.10e-24,25 | |||
|ontology_enrichment_uberon=UBERON:0004913!7.57e-17!1;UBERON:0003703!7.57e-17!1;UBERON:0001174!7.57e-17!1;UBERON:0004914!7.57e-17!1;UBERON:0001154!1.21e-16!1;UBERON:0001153!1.21e-16!1;UBERON:0005409!1.18e-10!35;UBERON:0002294!8.35e-10!7;UBERON:0001173!8.35e-10!7;UBERON:0004912!8.35e-10!7;UBERON:0001873!7.49e-09!2;UBERON:0010122!7.49e-09!2;UBERON:0000945!1.17e-08!8;UBERON:0010039!1.17e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82785911099448,2.68219434960993,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@ADAP1 | |||
}} |
Revision as of 02:38, 14 September 2013
Short description: | p19@ADAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_ADAP1_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 11bp_to_ENST00000538188_5end |
EntrezGene: | ADAP1 |
HGNC: | 16486 |
UniProt: | F5H7V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.61e-131 | 2 |
cystadenocarcinoma | 4.66e-66 | 1 |
mucinous cystadenocarcinoma | 4.66e-66 | 1 |
adenocarcinoma | 1.10e-24 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.