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FFCP PHASE1:Mm9::chr3:67319390..67319406,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=109222|HGNC=|UniProt=Q8BVL6|association_with_transcript=38bp_to_NM_001164763,uc008plo.2_5end|description=CAGE_peak_1_at_Rarres1_5end|id=chr3:67319390..67319406,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.68e-07!22;UBERON:0007499!2.68e-07!22;UBERON:0006925!2.68e-07!22;UBERON:0009497!2.68e-07!22;UBERON:0000015!2.68e-07!22;UBERON:0002423!2.68e-07!22;UBERON:0006235!2.68e-07!22;UBERON:0008835!2.68e-07!22;UBERON:0003894!2.68e-07!22;UBERON:0004161!2.68e-07!22;UBERON:0008836!2.68e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.87e-09,22;UBERON:0007499,1.87e-09,22;UBERON:0006925,1.87e-09,22;UBERON:0009497,1.87e-09,22;UBERON:0000015,1.87e-09,22;UBERON:0002423,1.87e-09,22;UBERON:0006235,1.87e-09,22;UBERON:0008835,1.87e-09,22;UBERON:0003894,1.87e-09,22;UBERON:0004161,1.87e-09,22;UBERON:0008836,1.87e-09,22;UBERON:0009854,1.02e-08,23;UBERON:0009856,1.02e-08,23;UBERON:0002365,1.68e-08,25;UBERON:0002330,1.68e-08,25;UBERON:0005256,6.31e-07,45|phase1_expression=0.160148847104794,2.44282785347553,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,70.5022180663233,61.1302895253673,77.4567294122296,20.342174953049,1.09012578190223,1.31811709640683,1.74986909166855,13.2987100544094,2.87505128729943,0,0,0,0,0.85960031981627,1.54701627683233,0.809265843438391,0,0,3.04960078862219,6.22506357277798,3.1496490104849,5.93319817540185,2.1314403448383,6.2916023208865,8.06858441175265,0,0,0,1.99955689082663,1.98781686856452,0,0.0958454710182364,0,1.10115880999389,1.14918604276669,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,2.25105044012672,1.83357897332172,2.35702868378934,1.56608848879013,0.559198337475902,1.13589289999776,2.04043212288321,0,38.7190744641624,12.2394840067395,68.5423053380028,66.9269709971099,47.4908500323176,43.6782146609748,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0,279.636321431978,4.40194402200192,1.03909497345377,0.693941307064543,0.608930956624282,0.691846491768175,0.301445281105245,0.587943535678524,0.251333182659351,43.7535092889842,1.01219549843938,1.76922110389975,0.808834249737046,0.441683036920787,1.93950101254089,0,0.585561594023094,0.209446706813455,1.27728527604296,0,0,0,0.599162557619291,0.915001205637253,0,0.521472960576829,0.511430914660661,1.0389402227978,0.648965052271031,1.62942982160506,1.24406970610093,8.08712826987759,2.10441855886474,0.390361328888111,1.14951052216736,0.900310649026746,2.41127708537144,0.612328492361951,0.640568601424249,0.281105173679186,1.81092359517311,1.5089759505299,1.70195472151037,0.703804496655795,0.657587197282725,1.39023624612799,10.0993128291428,15.6394423670037,1.39323986772945,0,0,0,0.621377317606506,0,0,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.486412857275134,0,1.3173006917463,0.536825675041487,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0.696710015581316,0,0.403367049246685,0.22237804384487,0.951128130562796,0.474529061544512,4.28217282282428,5.27803938480566,6.76452004939913,7.99352757188393,2.69645822596266,0.864552199498777,0.995706366271836,0.379335801906163,0.342745537829186,1.1270773567308,0.814605311381257,0.581857461502877,1.19230893813542,1.45444035385792,0.442830443938806,0.627994911365499,0.493588655687202,25.4949259294948,0,1.76903095601883,0.224862112384854,1.21716072833102,1.20588579876208,1.2731292589071,2.30156909960649,3.56697498905078,10.158772287959,24.4405951096503,14.1413560114031,21.5305994449047,22.9846778931872,31.0357525392908,23.1572890254416,0,2.08440552947533,1.46668478797823,1.35796068620151,1.17345124144251,1.00503754465089,0.238043640886014,1.17080188714679,0,0.221464689648775,0.318909537314974,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,0.963303539926752,1.28932855251423,0,1.51482556322624,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0.728341908464944,0.604647113929502,0.377210159511796,0.590603785761546,1.22974059177571,0,1.45413491791002,0.712994756769443,1.58018378967908,0,3.09406629744561,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.709360934569094,1.42695054081656,2.96188237083818,0.304464949114599,0,7.20229040936989,0.441056796109924,126.632642259057,44.7256461947658,31.0008434130721,38.0797777370005,30.5302073525814,4.95517422270746,2.41052892613663,0,1.44470807574256,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.627264888043406,0,0.674321731924103,1.65306911450672,1.04702376793612,0.90730481304255,3.10669656543463,2.81846469342095,0.897099276263873,0.827292452285488,2.33341426012857,1.54991788173277,3.04121025883401,5.39843297770468,16.5359568751817,13.7365741197681,4.1069300540421,3.45636007509439,0,0,0.205421914329655,1.16928740680016,0.895133478337407,1.39076948346885,1.20195449519969,0.886137163047463,0.807731599585181,1.37172251979,1.31074040677893,0.974578807397524,0.192423683280659,1.16876902181569,16.5513180039104,0.443971906748129,0,0,0,0,0,5.57357785605571,9.5298699766719,0.564751842617067,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,1.21553358534147,0.419226325255965,1.2869045591501,0.666740183404846,1.44224540067226,2.24643446714271,1.01078884705519,1.52087579934144,0.565879024158229,0.655490552289177,0.832326981263301,1.26358031702349,2.38146845641537,0.811190281613988,1.15745532278223,1.64834360321323,1.03039244094078,0.685738504770831,2.48466128623072,1.1921809497366,1.59881058295561,1.50575008664529,0.761531471025089,0.914639864363863,0.526139422875686,1.62964936615034,1.12228454331548,0.711810108745045,1.57607171800902,1.63692417267876,1.39443157067369,5.78719832943424,5.24602213669686,4.67863216890817,10.3138105943183,4.78220830172108,9.48543102213917,2.08681052058379|short_description=p1@Rarres1}}
|EntrezGene=109222
|HGNC=
|UniProt=Q8BVL6
|association_with_transcript=38bp_to_NM_001164763,uc008plo.2_5end
|description=CAGE_peak_1_at_Rarres1_5end
|id=chr3:67319390..67319406,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!2.68e-07!22;UBERON:0007499!2.68e-07!22;UBERON:0006925!2.68e-07!22;UBERON:0009497!2.68e-07!22;UBERON:0000015!2.68e-07!22;UBERON:0002423!2.68e-07!22;UBERON:0006235!2.68e-07!22;UBERON:0008835!2.68e-07!22;UBERON:0003894!2.68e-07!22;UBERON:0004161!2.68e-07!22;UBERON:0008836!2.68e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.87e-09,22;UBERON:0007499,1.87e-09,22;UBERON:0006925,1.87e-09,22;UBERON:0009497,1.87e-09,22;UBERON:0000015,1.87e-09,22;UBERON:0002423,1.87e-09,22;UBERON:0006235,1.87e-09,22;UBERON:0008835,1.87e-09,22;UBERON:0003894,1.87e-09,22;UBERON:0004161,1.87e-09,22;UBERON:0008836,1.87e-09,22;UBERON:0009854,1.02e-08,23;UBERON:0009856,1.02e-08,23;UBERON:0002365,1.68e-08,25;UBERON:0002330,1.68e-08,25;UBERON:0005256,6.31e-07,45
|phase1_expression=0.160148847104794,2.44282785347553,0.454999239389536,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,70.5022180663233,61.1302895253673,77.4567294122296,20.342174953049,1.09012578190223,1.31811709640683,1.74986909166855,13.2987100544094,2.87505128729943,0,0,0,0,0.85960031981627,1.54701627683233,0.809265843438391,0,0,3.04960078862219,6.22506357277798,3.1496490104849,5.93319817540185,2.1314403448383,6.2916023208865,8.06858441175265,0,0,0,1.99955689082663,1.98781686856452,0,0.0958454710182364,0,1.10115880999389,1.14918604276669,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,2.25105044012672,1.83357897332172,2.35702868378934,1.56608848879013,0.559198337475902,1.13589289999776,2.04043212288321,0,38.7190744641624,12.2394840067395,68.5423053380028,66.9269709971099,47.4908500323176,43.6782146609748,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0,279.636321431978,4.40194402200192,1.03909497345377,0.693941307064543,0.608930956624282,0.691846491768175,0.301445281105245,0.587943535678524,0.251333182659351,43.7535092889842,1.01219549843938,1.76922110389975,0.808834249737046,0.441683036920787,1.93950101254089,0,0.585561594023094,0.209446706813455,1.27728527604296,0,0,0,0.599162557619291,0.915001205637253,0,0.521472960576829,0.511430914660661,1.0389402227978,0.648965052271031,1.62942982160506,1.24406970610093,8.08712826987759,2.10441855886474,0.390361328888111,1.14951052216736,0.900310649026746,2.41127708537144,0.612328492361951,0.640568601424249,0.281105173679186,1.81092359517311,1.5089759505299,1.70195472151037,0.703804496655795,0.657587197282725,1.39023624612799,10.0993128291428,15.6394423670037,1.39323986772945,0,0,0,0.621377317606506,0,0,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.486412857275134,0,1.3173006917463,0.536825675041487,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0.696710015581316,0,0.403367049246685,0.22237804384487,0.951128130562796,0.474529061544512,4.28217282282428,5.27803938480566,6.76452004939913,7.99352757188393,2.69645822596266,0.864552199498777,0.995706366271836,0.379335801906163,0.342745537829186,1.1270773567308,0.814605311381257,0.581857461502877,1.19230893813542,1.45444035385792,0.442830443938806,0.627994911365499,0.493588655687202,25.4949259294948,0,1.76903095601883,0.224862112384854,1.21716072833102,1.20588579876208,1.2731292589071,2.30156909960649,3.56697498905078,10.158772287959,24.4405951096503,14.1413560114031,21.5305994449047,22.9846778931872,31.0357525392908,23.1572890254416,0,2.08440552947533,1.46668478797823,1.35796068620151,1.17345124144251,1.00503754465089,0.238043640886014,1.17080188714679,0,0.221464689648775,0.318909537314974,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0,0.963303539926752,1.28932855251423,0,1.51482556322624,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0.728341908464944,0.604647113929502,0.377210159511796,0.590603785761546,1.22974059177571,0,1.45413491791002,0.712994756769443,1.58018378967908,0,3.09406629744561,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.709360934569094,1.42695054081656,2.96188237083818,0.304464949114599,0,7.20229040936989,0.441056796109924,126.632642259057,44.7256461947658,31.0008434130721,38.0797777370005,30.5302073525814,4.95517422270746,2.41052892613663,0,1.44470807574256,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0.627264888043406,0,0.674321731924103,1.65306911450672,1.04702376793612,0.90730481304255,3.10669656543463,2.81846469342095,0.897099276263873,0.827292452285488,2.33341426012857,1.54991788173277,3.04121025883401,5.39843297770468,16.5359568751817,13.7365741197681,4.1069300540421,3.45636007509439,0,0,0.205421914329655,1.16928740680016,0.895133478337407,1.39076948346885,1.20195449519969,0.886137163047463,0.807731599585181,1.37172251979,1.31074040677893,0.974578807397524,0.192423683280659,1.16876902181569,16.5513180039104,0.443971906748129,0,0,0,0,0,5.57357785605571,9.5298699766719,0.564751842617067,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,1.21553358534147,0.419226325255965,1.2869045591501,0.666740183404846,1.44224540067226,2.24643446714271,1.01078884705519,1.52087579934144,0.565879024158229,0.655490552289177,0.832326981263301,1.26358031702349,2.38146845641537,0.811190281613988,1.15745532278223,1.64834360321323,1.03039244094078,0.685738504770831,2.48466128623072,1.1921809497366,1.59881058295561,1.50575008664529,0.761531471025089,0.914639864363863,0.526139422875686,1.62964936615034,1.12228454331548,0.711810108745045,1.57607171800902,1.63692417267876,1.39443157067369,5.78719832943424,5.24602213669686,4.67863216890817,10.3138105943183,4.78220830172108,9.48543102213917,2.08681052058379
|short_description=p1@Rarres1
}}

Revision as of 02:27, 14 September 2013

Short description:p1@Rarres1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rarres1_5end
Coexpression cluster:NA
Association with transcript: 38bp_to_NM_001164763, uc008plo.2_5end
EntrezGene:Rarres1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rarres1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D870.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D961.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B377.46
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F738.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C868.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F466.93
Mouse hepatocyte, donor8.CNhs13091.11824-124F647.49
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6279.64
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A843.75
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B515.64
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A57.99
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B225.49
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G210.16
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H214.14
liver, neonate N10.CNhs11115.751-24B921.53
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H131.04
liver, neonate N30.CNhs11106.1382-42D123.16
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C3126.63
skin, neonate N00.CNhs11124.650-25G444.73
skin, neonate N03.CNhs11215.662-22H331.00
skin, neonate N06.CNhs11097.693-20I538.08
skin, neonate N10.CNhs11108.762-6C430.53
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I416.54
testis, neonate N10.CNhs11204.763-44D913.74
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B416.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.87e-0922
epithelial sac1.87e-0922
digestive gland1.87e-0922
epithelium of foregut-midgut junction1.87e-0922
anatomical boundary1.87e-0922
hepatobiliary system1.87e-0922
foregut-midgut junction1.87e-0922
hepatic diverticulum1.87e-0922
liver primordium1.87e-0922
septum transversum1.87e-0922
liver bud1.87e-0922
digestive tract diverticulum1.02e-0823
sac1.02e-0823
exocrine gland1.68e-0825
exocrine system1.68e-0825
trunk mesenchyme6.31e-0745







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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