FFCP PHASE1:Hg19::chr7:73483509..73483536,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2006|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=3327|TSSclassifier=N|UniProt=|association_with_transcript=-257bp_to_AF086171_5end|coexpression_cluster_id=C379|description=CAGE_peak_10_at_ELN_5end|id=chr7:73483509..73483536,+|ontology_enrichment_celltype=CL:0000057!2.22e-11!75;CL:0000136!6.20e-09!15;CL:0000055!3.04e-08!180;CL:0002620!4.44e-08!23;CL:0000153!6.96e-08!9;CL:0000447!6.96e-08!9;CL:0002334!3.22e-07!12|ontology_enrichment_celltype_v019=CL:0002334;1.03e-12;12!CL:0000136;2.22e-12;13!CL:0000153;2.85e-12;9!CL:0000447;2.85e-12;9!CL:0002615;1.39e-11;3!CL:0002580;3.30e-11;3!CL:0000135;1.63e-10;3!CL:0002579;1.63e-10;3!CL:0000388;1.63e-10;3!CL:0000138;1.25e-08;6!CL:0002617;4.04e-08;2!CL:0000499;1.11e-07;28!CL:0000327;4.37e-07;15|ontology_enrichment_celltype_v019_2=CL:0000057,4.22e-13,76;CL:0002334,9.37e-13,12;CL:0000153,2.22e-12,9;CL:0000447,2.22e-12,9;CL:0002615,1.44e-11,3;CL:0002580,2.85e-11,3;CL:0000136,1.33e-10,15;CL:0002579,1.80e-10,3;CL:0000135,1.92e-10,3;CL:0000388,1.92e-10,3;CL:0000058,1.18e-08,6;CL:0000138,1.18e-08,6;CL:0002617,3.72e-08,2;CL:0000499,1.04e-07,28;CL:0000327,3.79e-07,15|ontology_enrichment_development_v019=UBERON:0006965;2.12e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004457!3.03e-11!12;UBERON:0000042!3.03e-11!12;UBERON:0003688!3.72e-10!6;UBERON:0002358!3.72e-10!6;UBERON:0003684!3.72e-10!6;UBERON:0001178!3.72e-10!6;UBERON:0000475!7.27e-07!365;UBERON:0002199!7.89e-07!45;UBERON:0002416!7.89e-07!45|ontology_enrichment_uberon_v019=UBERON:0004457;4.27e-23;9!UBERON:0000042;4.27e-23;9!UBERON:0003688;2.37e-20;6!UBERON:0002358;2.37e-20;6!UBERON:0003684;2.37e-20;6!UBERON:0001178;2.37e-20;6!UBERON:0001443;5.13e-11;11!UBERON:0007846;1.63e-10;3!UBERON:0000043;1.63e-10;3!UBERON:0007845;1.63e-10;3!UBERON:0000310;1.35e-08;10!UBERON:0005406;1.78e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.72e-20,6;UBERON:0002358,2.72e-20,6;UBERON:0003684,2.72e-20,6;UBERON:0001178,2.72e-20,6;UBERON:0004457,5.36e-17,12;UBERON:0000042,5.36e-17,12;UBERON:0001443,4.51e-11,11;UBERON:0007846,1.92e-10,3;UBERON:0000043,1.92e-10,3;UBERON:0007845,1.92e-10,3;UBERON:0000310,1.21e-08,10;UBERON:0005406,1.56e-07,2|phase1_expression=4.90531624030503,13.274232481241,9.16203626623813,11.0080628188443,15.1966772105278,6.10636966870258,2.53299878168311,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42158728576849,2.00535164254356,1.59331170856906,0.795285947051099,1.45990461090791,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.01304409331664,0,1.14734648299525,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,3.21447008062124,0,0,0,0,0,0,3.37136575378922,3.45547535485173,0,3.40840307808838,0.213557388818567,0.211931901159562,0.900273288253207,0,1.8034837803194,0.744467425326359,0.168776332241266,1.16924406193438,0,0.0920498986422993,0.323292113637624,1.77504796258307,2.21654616100809,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,2.15662369942424,5.7430967917057,0,0.868687840005475,0.205476322550383,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.96271887676878,1.73472656537328,0,0,2.27407504055985,3.10419213877515,1.32845119707087,0,0,0.195801157462741,0,0,0,0,0,0,0,7.69134204238208,3.83654933220156,11.7877239661891,1.28139149255701,7.16390148693385,3.86049410744658,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,2.74439925886963,3.95153871551882,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,4.38345574152353,0,0,0,0,4.3545542272653,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,9.63093176758547,0,0,0,0,0,3.62972148145992,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.484945082442097,0,2.25980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-257bp_to_AF086171_5end | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_10_at_ELN_5end | |||
|id=chr7:73483509..73483536,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.22e-11!75;CL:0000136!6.20e-09!15;CL:0000055!3.04e-08!180;CL:0002620!4.44e-08!23;CL:0000153!6.96e-08!9;CL:0000447!6.96e-08!9;CL:0002334!3.22e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.03e-12;12!CL:0000136;2.22e-12;13!CL:0000153;2.85e-12;9!CL:0000447;2.85e-12;9!CL:0002615;1.39e-11;3!CL:0002580;3.30e-11;3!CL:0000135;1.63e-10;3!CL:0002579;1.63e-10;3!CL:0000388;1.63e-10;3!CL:0000138;1.25e-08;6!CL:0002617;4.04e-08;2!CL:0000499;1.11e-07;28!CL:0000327;4.37e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.22e-13,76;CL:0002334,9.37e-13,12;CL:0000153,2.22e-12,9;CL:0000447,2.22e-12,9;CL:0002615,1.44e-11,3;CL:0002580,2.85e-11,3;CL:0000136,1.33e-10,15;CL:0002579,1.80e-10,3;CL:0000135,1.92e-10,3;CL:0000388,1.92e-10,3;CL:0000058,1.18e-08,6;CL:0000138,1.18e-08,6;CL:0002617,3.72e-08,2;CL:0000499,1.04e-07,28;CL:0000327,3.79e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.03e-11!12;UBERON:0000042!3.03e-11!12;UBERON:0003688!3.72e-10!6;UBERON:0002358!3.72e-10!6;UBERON:0003684!3.72e-10!6;UBERON:0001178!3.72e-10!6;UBERON:0000475!7.27e-07!365;UBERON:0002199!7.89e-07!45;UBERON:0002416!7.89e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.27e-23;9!UBERON:0000042;4.27e-23;9!UBERON:0003688;2.37e-20;6!UBERON:0002358;2.37e-20;6!UBERON:0003684;2.37e-20;6!UBERON:0001178;2.37e-20;6!UBERON:0001443;5.13e-11;11!UBERON:0007846;1.63e-10;3!UBERON:0000043;1.63e-10;3!UBERON:0007845;1.63e-10;3!UBERON:0000310;1.35e-08;10!UBERON:0005406;1.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.72e-20,6;UBERON:0002358,2.72e-20,6;UBERON:0003684,2.72e-20,6;UBERON:0001178,2.72e-20,6;UBERON:0004457,5.36e-17,12;UBERON:0000042,5.36e-17,12;UBERON:0001443,4.51e-11,11;UBERON:0007846,1.92e-10,3;UBERON:0000043,1.92e-10,3;UBERON:0007845,1.92e-10,3;UBERON:0000310,1.21e-08,10;UBERON:0005406,1.56e-07,2 | |||
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|short_description=p10@ELN | |||
}} |
Revision as of 01:56, 14 September 2013
Short description: | p10@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | -257bp_to_AF086171_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.22e-13 | 76 |
preadipocyte | 9.37e-13 | 12 |
GAG secreting cell | 2.22e-12 | 9 |
carbohydrate secreting cell | 2.22e-12 | 9 |
adipocyte of omentum tissue | 1.44e-11 | 3 |
preadipocyte of the breast | 2.85e-11 | 3 |
fat cell | 1.33e-10 | 15 |
omentum preadipocyte | 1.80e-10 | 3 |
fibrocyte | 1.92e-10 | 3 |
tendon cell | 1.92e-10 | 3 |
chondroblast | 1.18e-08 | 6 |
chondrocyte | 1.18e-08 | 6 |
adipocyte of breast | 3.72e-08 | 2 |
stromal cell | 1.04e-07 | 28 |
extracellular matrix secreting cell | 3.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.72e-20 | 6 |
peritoneum | 2.72e-20 | 6 |
abdominal cavity | 2.72e-20 | 6 |
visceral peritoneum | 2.72e-20 | 6 |
cavity lining | 5.36e-17 | 12 |
serous membrane | 5.36e-17 | 12 |
chest | 4.51e-11 | 11 |
dense regular connective tissue | 1.92e-10 | 3 |
tendon | 1.92e-10 | 3 |
regular connective tissue | 1.92e-10 | 3 |
breast | 1.21e-08 | 10 |
perirenal fat | 1.56e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.