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FFCP PHASE1:Mm9::chr3:144423758..144423773,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12722|HGNC=|UniProt=Q9QX15|association_with_transcript=31bp_to_ENSMUST00000059091_5end|description=CAGE_peak_2_at_Clca1_5end|id=chr3:144423758..144423773,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.64e-13!49;UBERON:0005173!3.64e-13!49;UBERON:0002417!3.64e-13!49;UBERON:0000916!3.64e-13!49;UBERON:0003914!8.27e-12!47;UBERON:0009569!9.67e-12!66;UBERON:0000466!1.13e-11!79;UBERON:0000926!5.61e-11!193;UBERON:0004120!5.61e-11!193;UBERON:0006603!5.61e-11!193;UBERON:0004872!1.44e-10!33;UBERON:0005177!8.20e-10!85;UBERON:0002100!8.91e-09!98;UBERON:0002323!3.00e-08!37;UBERON:0004458!3.00e-08!37;UBERON:0003886!4.67e-08!38;UBERON:0007100!6.09e-08!18;UBERON:0000948!6.09e-08!18;UBERON:0005498!6.09e-08!18;UBERON:0004140!6.09e-08!18;UBERON:0009881!6.09e-08!18;UBERON:0004141!6.09e-08!18;UBERON:0003084!6.09e-08!18;UBERON:0007005!6.09e-08!18;UBERON:0004139!6.09e-08!18;UBERON:0004291!6.09e-08!18;UBERON:0002553!1.91e-07!39;UBERON:0004535!3.85e-07!23;UBERON:0001009!3.85e-07!23;UBERON:0005409!7.24e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.12e-14,49;UBERON:0005173,4.12e-14,49;UBERON:0002417,4.12e-14,49;UBERON:0000916,4.12e-14,49;UBERON:0005177,2.30e-13,79;UBERON:0003914,1.22e-12,47;UBERON:0002100,5.52e-12,90;UBERON:0009569,3.12e-11,66;UBERON:0004872,6.30e-11,33;UBERON:0002323,4.54e-09,37;UBERON:0004458,4.54e-09,37;UBERON:0003886,1.52e-08,38;UBERON:0007100,1.70e-08,18;UBERON:0000948,1.70e-08,18;UBERON:0005498,1.70e-08,18;UBERON:0004140,1.70e-08,18;UBERON:0009881,1.70e-08,18;UBERON:0004141,1.70e-08,18;UBERON:0003084,1.70e-08,18;UBERON:0007005,1.70e-08,18;UBERON:0004139,1.70e-08,18;UBERON:0004291,1.70e-08,18;UBERON:0003104,2.91e-08,61;UBERON:0009142,2.91e-08,61;UBERON:0002553,4.72e-08,39;UBERON:0009854,2.02e-07,23;UBERON:0009856,2.02e-07,23;UBERON:0002107,2.62e-07,22;UBERON:0007499,2.62e-07,22;UBERON:0006925,2.62e-07,22;UBERON:0009497,2.62e-07,22;UBERON:0000015,2.62e-07,22;UBERON:0002423,2.62e-07,22;UBERON:0006235,2.62e-07,22;UBERON:0008835,2.62e-07,22;UBERON:0003894,2.62e-07,22;UBERON:0004161,2.62e-07,22;UBERON:0008836,2.62e-07,22;UBERON:0004535,3.63e-07,23;UBERON:0001009,3.63e-07,23|phase1_expression=0.160148847104794,2.09385244583617,2.27499619694768,3.62957053568196,3.50627010962443,2.18243053485457,0.700837921786577,0,0,0,0,0,0.171200729931206,0,8.99396356902289,13.3633676477285,15.3903613188192,0.473193248037357,0.274228867211478,0.42438965179803,0.765389611359628,0,0,0.319984845586813,0.45881856213434,2.29692785646008,1.7230479846363,1.72376986148711,0.190023419456374,0.504060259519861,0.886922042621219,0.635030673459631,0.61506478758457,0,2.02196133825892,0.332469290716985,0.408338712524738,0.418531630736908,0,0.523523743973798,0,0,0,0,0.405507724878058,0.734187008646726,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,32.1574295044934,19.4842739158355,21.1425557833751,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,7.8263411949453,14.6272059086836,0,0,0.649776417447669,0,0.983110940922263,0.170430322578058,0,0,0,0,0,0,0,0,0,2.96878087269556,21.7507822263624,0.29688427812965,2.08182392119363,2.74018930480927,4.15107895060905,3.46662073271032,6.93773372100658,0.251333182659351,6.92145909656247,2.60278842455841,2.65383165584962,0.808834249737046,3.75430581382669,2.42437626567611,1.86391761218122,0.292780797011547,0,1.53274233125155,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,1.32391173005411,2.86136032403214,0.505445516867349,0,0,0,0.360124259610698,0.30140963567143,0.204109497453984,0.512454881139399,0,0,0,0,0,0.219195732427575,0,1.39300866608867,0.823128545631774,7.76233640592123,0,0,0,6.42089894860056,7.73935997937617,9.7233513188948,11.8372367792605,11.8058539048442,9.87309522479221,9.06882384526591,7.51165523918934,9.10769670463922,3.78487654801005,2.79084688934462,1.37816976227955,0.877199924551994,1.3173006917463,1.07365135008297,0,0.102904612379284,0,6.08236303326152,1.06644125267617,1.85789337488351,3.60828891701861,3.63030344322017,1.55664630691409,3.04361001780095,0,2.9645811850322,0.502670417600539,2.58643413653496,1.9496408711912,2.69645822596266,1.94524244887225,1.39398891278057,2.0863469104839,3.42745537829186,6.76246414038483,4.2766778847516,5.23671715352589,6.8031745293609,5.75452487830741,0.442830443938806,2.98297582898612,2.96153193412321,2.07516838961004,2.16898637430922,3.34150291692445,5.62155280962134,5.47722327748958,4.58236603529592,4.32863948028414,11.7955416354832,11.0251954207024,6.31491250332587,17.2521847832825,10.0478055870496,9.67316786655138,4.2938409251009,4.12614051100398,8.20153986317724,1.66277871149944,1.89491411770485,1.79261474086228,0.848725428875941,1.87752198630802,1.50755631697634,7.14130922658041,7.61021226645415,0.945810864637146,0.44292937929755,0.318909537314974,0.655453258862952,0.690739927463582,1.44649058581512,0,0,0,0.827810238914197,0,0,0,0.5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|EntrezGene=12722
|HGNC=
|UniProt=Q9QX15
|association_with_transcript=31bp_to_ENSMUST00000059091_5end
|description=CAGE_peak_2_at_Clca1_5end
|id=chr3:144423758..144423773,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!3.64e-13!49;UBERON:0005173!3.64e-13!49;UBERON:0002417!3.64e-13!49;UBERON:0000916!3.64e-13!49;UBERON:0003914!8.27e-12!47;UBERON:0009569!9.67e-12!66;UBERON:0000466!1.13e-11!79;UBERON:0000926!5.61e-11!193;UBERON:0004120!5.61e-11!193;UBERON:0006603!5.61e-11!193;UBERON:0004872!1.44e-10!33;UBERON:0005177!8.20e-10!85;UBERON:0002100!8.91e-09!98;UBERON:0002323!3.00e-08!37;UBERON:0004458!3.00e-08!37;UBERON:0003886!4.67e-08!38;UBERON:0007100!6.09e-08!18;UBERON:0000948!6.09e-08!18;UBERON:0005498!6.09e-08!18;UBERON:0004140!6.09e-08!18;UBERON:0009881!6.09e-08!18;UBERON:0004141!6.09e-08!18;UBERON:0003084!6.09e-08!18;UBERON:0007005!6.09e-08!18;UBERON:0004139!6.09e-08!18;UBERON:0004291!6.09e-08!18;UBERON:0002553!1.91e-07!39;UBERON:0004535!3.85e-07!23;UBERON:0001009!3.85e-07!23;UBERON:0005409!7.24e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.12e-14,49;UBERON:0005173,4.12e-14,49;UBERON:0002417,4.12e-14,49;UBERON:0000916,4.12e-14,49;UBERON:0005177,2.30e-13,79;UBERON:0003914,1.22e-12,47;UBERON:0002100,5.52e-12,90;UBERON:0009569,3.12e-11,66;UBERON:0004872,6.30e-11,33;UBERON:0002323,4.54e-09,37;UBERON:0004458,4.54e-09,37;UBERON:0003886,1.52e-08,38;UBERON:0007100,1.70e-08,18;UBERON:0000948,1.70e-08,18;UBERON:0005498,1.70e-08,18;UBERON:0004140,1.70e-08,18;UBERON:0009881,1.70e-08,18;UBERON:0004141,1.70e-08,18;UBERON:0003084,1.70e-08,18;UBERON:0007005,1.70e-08,18;UBERON:0004139,1.70e-08,18;UBERON:0004291,1.70e-08,18;UBERON:0003104,2.91e-08,61;UBERON:0009142,2.91e-08,61;UBERON:0002553,4.72e-08,39;UBERON:0009854,2.02e-07,23;UBERON:0009856,2.02e-07,23;UBERON:0002107,2.62e-07,22;UBERON:0007499,2.62e-07,22;UBERON:0006925,2.62e-07,22;UBERON:0009497,2.62e-07,22;UBERON:0000015,2.62e-07,22;UBERON:0002423,2.62e-07,22;UBERON:0006235,2.62e-07,22;UBERON:0008835,2.62e-07,22;UBERON:0003894,2.62e-07,22;UBERON:0004161,2.62e-07,22;UBERON:0008836,2.62e-07,22;UBERON:0004535,3.63e-07,23;UBERON:0001009,3.63e-07,23
|phase1_expression=0.160148847104794,2.09385244583617,2.27499619694768,3.62957053568196,3.50627010962443,2.18243053485457,0.700837921786577,0,0,0,0,0,0.171200729931206,0,8.99396356902289,13.3633676477285,15.3903613188192,0.473193248037357,0.274228867211478,0.42438965179803,0.765389611359628,0,0,0.319984845586813,0.45881856213434,2.29692785646008,1.7230479846363,1.72376986148711,0.190023419456374,0.504060259519861,0.886922042621219,0.635030673459631,0.61506478758457,0,2.02196133825892,0.332469290716985,0.408338712524738,0.418531630736908,0,0.523523743973798,0,0,0,0,0.405507724878058,0.734187008646726,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,32.1574295044934,19.4842739158355,21.1425557833751,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,7.8263411949453,14.6272059086836,0,0,0.649776417447669,0,0.983110940922263,0.170430322578058,0,0,0,0,0,0,0,0,0,2.96878087269556,21.7507822263624,0.29688427812965,2.08182392119363,2.74018930480927,4.15107895060905,3.46662073271032,6.93773372100658,0.251333182659351,6.92145909656247,2.60278842455841,2.65383165584962,0.808834249737046,3.75430581382669,2.42437626567611,1.86391761218122,0.292780797011547,0,1.53274233125155,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,1.32391173005411,2.86136032403214,0.505445516867349,0,0,0,0.360124259610698,0.30140963567143,0.204109497453984,0.512454881139399,0,0,0,0,0,0.219195732427575,0,1.39300866608867,0.823128545631774,7.76233640592123,0,0,0,6.42089894860056,7.73935997937617,9.7233513188948,11.8372367792605,11.8058539048442,9.87309522479221,9.06882384526591,7.51165523918934,9.10769670463922,3.78487654801005,2.79084688934462,1.37816976227955,0.877199924551994,1.3173006917463,1.07365135008297,0,0.102904612379284,0,6.08236303326152,1.06644125267617,1.85789337488351,3.60828891701861,3.63030344322017,1.55664630691409,3.04361001780095,0,2.9645811850322,0.502670417600539,2.58643413653496,1.9496408711912,2.69645822596266,1.94524244887225,1.39398891278057,2.0863469104839,3.42745537829186,6.76246414038483,4.2766778847516,5.23671715352589,6.8031745293609,5.75452487830741,0.442830443938806,2.98297582898612,2.96153193412321,2.07516838961004,2.16898637430922,3.34150291692445,5.62155280962134,5.47722327748958,4.58236603529592,4.32863948028414,11.7955416354832,11.0251954207024,6.31491250332587,17.2521847832825,10.0478055870496,9.67316786655138,4.2938409251009,4.12614051100398,8.20153986317724,1.66277871149944,1.89491411770485,1.79261474086228,0.848725428875941,1.87752198630802,1.50755631697634,7.14130922658041,7.61021226645415,0.945810864637146,0.44292937929755,0.318909537314974,0.655453258862952,0.690739927463582,1.44649058581512,0,0,0,0.827810238914197,0,0,0,0.504941854408746,0,0.780877488593277,0,2.38968797952552,1.55959071857676,1.69845918473299,2.02405350837447,0.876767573733936,0.790575555893047,0,2.41298144854057,0.890328018336276,1.62886959353576,1.31976098378028,0,4.12727081463468,5.44182402536552,10.1846743068185,5.02013217897314,5.84126781093462,8.26970538138308,6.18007340111759,2.13898427030833,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,1.48282449604674,0,0.65954501176592,1.77610869365496,0.482503399425247,0.477489376012546,0.492422699235184,4.08073171281791,0,18.2831842453702,26.004745363366,41.2983796034457,18.4601087864597,17.4968611482912,13.2691340459783,0.849892149969277,0.559805809294632,0.138199973804424,0,0.949007980743406,6.30290348093231,2.05210147561422,1.46361807210128,0.87345025498471,0.944050424693745,2.0663363931334,0.523511883968059,0.777689839750757,0,0,29.0062099325319,14.7258056506817,16.3338998209,9.94530640778529,13.685446164753,12.9092962510329,3.9061315453185,1.57289016638566,0.966336483304024,0.288030006257865,0,0.202725215290164,0.205421914329655,0.51968329191118,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.228620419965,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0,0,0,2.89784391048286,3.75364950902364,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,1.21553358534147,0.209613162627982,0.551530525350042,1.77797382241292,1.44224540067226,1.92551525755089,2.02157769411038,1.2673964994512,1.32038438970253,1.96647165686753,1.79270426733634,2.06767688240208,2.38146845641537,1.50649623728312,1.92909220463705,2.06042950401653,1.17759136107518,2.05721551431249,1.4198064492747,2.14592570952589,1.59881058295561,1.31753132581463,1.09998990259179,0.73171189149109,1.05227884575137,2.30866993537965,1.12228454331548,1.30498519936592,1.47756723563345,0.409231043169689,1.39443157067369,2.12197272079256,0.249810577937946,1.87145286756327,3.43793686477277,2.10417165275728,1.32354851471709,0.695603506861264
|short_description=p2@Clca1
}}

Revision as of 01:44, 14 September 2013

Short description:p2@Clca1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clca1_5end
Coexpression cluster:NA
Association with transcript: 31bp_to_ENSMUST00000059091_5end
EntrezGene:Clca1
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p2@Clca1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C132.16
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.14
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H921.75
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D411.84
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E39.11
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G76.80
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F411.03
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C67.61
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E510.18
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G218.28
spleen, embryo E16.CNhs11035.461-43C126.00
spleen, embryo E18.CNhs11011.1271-21F241.30
spleen, neonate N10.CNhs11116.752-24D118.46
spleen, neonate N20.CNhs11112.824-19H117.50
spleen, neonate N25.CNhs11099.1354-25G313.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F529.01
testis, embryo E15.CNhs11034.443-27C514.73
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I59.95
testis, embryo E18.CNhs11027.503-18G513.69
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element4.12e-1449
abdominal segment element4.12e-1449
abdominal segment of trunk4.12e-1449
abdomen4.12e-1449
trunk region element2.30e-1379
epithelial tube1.22e-1247
trunk5.52e-1290
subdivision of trunk3.12e-1166
splanchnic layer of lateral plate mesoderm6.30e-1133
body cavity4.54e-0937
body cavity or lining4.54e-0937
body cavity precursor1.52e-0838
primary circulatory organ1.70e-0818
heart1.70e-0818
primitive heart tube1.70e-0818
primary heart field1.70e-0818
anterior lateral plate mesoderm1.70e-0818
heart tube1.70e-0818
heart primordium1.70e-0818
cardiac mesoderm1.70e-0818
cardiogenic plate1.70e-0818
heart rudiment1.70e-0818
mesenchyme2.91e-0861
entire embryonic mesenchyme2.91e-0861
anatomical cavity4.72e-0839
digestive tract diverticulum2.02e-0723
sac2.02e-0723
liver2.62e-0722
epithelial sac2.62e-0722
digestive gland2.62e-0722
epithelium of foregut-midgut junction2.62e-0722
anatomical boundary2.62e-0722
hepatobiliary system2.62e-0722
foregut-midgut junction2.62e-0722
hepatic diverticulum2.62e-0722
liver primordium2.62e-0722
septum transversum2.62e-0722
liver bud2.62e-0722
cardiovascular system3.63e-0723
circulatory system3.63e-0723







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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