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FFCP PHASE1:Mm9::chr3:121948499..121948526,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14630|HGNC=|UniProt=O09172,Q4FJZ6|association_with_transcript=0bp_to_NM_008129,uc008reo.1_5end|description=CAGE_peak_4_at_Gclm_5end|id=chr3:121948499..121948526,+|ontology_enrichment_celltype=CL:0000055!7.61e-08!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!2.23e-14!114;UBERON:0004111!4.05e-14!122;UBERON:0004121!4.35e-12!102;UBERON:0000924!4.35e-12!102;UBERON:0006601!4.35e-12!102;UBERON:0001017!8.88e-12!73;UBERON:0005743!8.88e-12!73;UBERON:0000073!5.91e-11!75;UBERON:0001016!5.91e-11!75;UBERON:0002346!1.32e-08!71;UBERON:0003075!1.32e-08!71;UBERON:0007284!1.32e-08!71;UBERON:0002616!1.43e-08!49;UBERON:0000955!1.44e-08!50;UBERON:0006238!1.44e-08!50;UBERON:0000033!4.88e-08!63;UBERON:0001049!5.42e-07!52;UBERON:0005068!5.42e-07!52;UBERON:0006241!5.42e-07!52;UBERON:0007135!5.42e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.22e-14,114;UBERON:0004111,4.02e-14,122;UBERON:0001017,8.82e-12,73;UBERON:0004121,4.86e-11,95;UBERON:0000924,4.86e-11,95;UBERON:0006601,4.86e-11,95;UBERON:0001016,5.88e-11,75;UBERON:0010314,2.22e-10,92;UBERON:0000073,5.46e-08,54;UBERON:0010371,9.15e-08,73;UBERON:0002346,1.01e-07,64;UBERON:0003075,1.01e-07,64;UBERON:0007284,1.01e-07,64;UBERON:0000955,4.61e-07,47;UBERON:0006238,4.61e-07,47;UBERON:0002616,4.69e-07,46;UBERON:0001049,5.41e-07,52;UBERON:0005068,5.41e-07,52;UBERON:0006241,5.41e-07,52;UBERON:0007135,5.41e-07,52|phase1_expression=3.04282809499109,0.697950815278722,0.454999239389536,0.60492842261366,0,0.33575854382378,0.233612640595526,2.1950964985068,0.84473233291,1.40438715793196,3.5955773327356,4.62678522172951,1.54080656938085,1.74840804837995,2.6648780945253,1.61980213911861,4.19737126876888,1.10411757875383,1.91960207048034,2.12194825899015,3.74190476664707,3.17731043842833,3.6567970479451,2.23989391910769,1.37645568640302,0,0.430761996159075,1.07735616342945,0.190023419456374,0.756090389279792,1.77384408524244,0.635030673459631,0.61506478758457,0,1.73310971850765,1.49611180822643,0.408338712524738,1.25559489221072,4.6880120671428,0,2.94115744015507,2.04913645487534,0.971020706062307,6.6725313527056,5.67710814829281,4.58866880404204,9.38869613217647,12.209408757305,7.0299578475031,6.9994763666742,6.15940255151595,8.62515386189829,0.838913030288682,2.90144856804538,0.672187598284928,3.60163210450326,4.01146815914259,4.64104883049698,2.83243045203437,1.5869729378161,3.1691570175309,3.38844532069132,5.33576877666684,2.6996991518442,2.96659908770092,2.8419204597844,6.89080254192331,8.83702102239575,3.00699875694585,4.45519596494579,5.04779907243317,2.28520787523043,4.19650227808066,4.04219637409348,3.45043695665651,1.83843757322004,13.2139057199266,9.57655035638908,9.98442466165583,2.37395317914349,2.8361169516747,2.6045668527838,9.49222196604695,7.87867654044352,9.16789486660861,5.59794312399969,2.70506193518296,2.23679334990361,1.96888102666279,2.34271836331035,2.02905142091174,4.30211938490693,5.439770669662,10.2543606411185,5.84798775702902,4.03224198387602,5.33688796500657,6.13549161281008,4.1565760736459,6.00677276667578,3.38024207464033,1.28326477414318,2.54805239706646,0,2.59789249213457,1.77351905832569,1.51657333504435,3.4255163915718,1.29468941823586,4.45326417194474,4.16364784238726,2.43572382649713,5.30415643688935,3.46662073271032,4.58595957829249,4.90099706185734,3.46072954828123,3.03658649531814,4.42305275974937,3.558870698843,3.3126227769059,1.93950101254089,0,7.90508151931177,9.42510180660548,2.29911349687732,1.7972268675888,4.19931911695385,2.41433431438823,6.14141621559773,6.8625090422794,2.38743269014442,5.21472960576829,2.30143911597297,6.64921742590592,4.38051410282946,5.39748628406676,2.73695335342205,4.80173241023982,5.89237196482127,2.34216797332867,2.98872735763515,3.06105620669094,3.46621081022145,4.76255494059295,3.07472928683639,3.5606655332697,5.17406741478031,2.80238390812695,2.26927296201383,2.28736461413134,5.04150184583422,2.78047249225598,2.78601733217733,2.88094990971121,2.9855140022774,1.40442637462647,2.31613116403244,0.568326998791185,3.52113813310353,3.04883877975425,3.42117916775928,5.44512891845984,4.13204886669548,4.31947916084659,3.48800917125612,4.02410102099429,5.13767506415546,5.10135534731789,2.79084688934462,4.62092214411378,3.07019973593198,4.17145219052996,4.02619256281115,4.6263788684108,4.32199371992995,1.65209391491899,1.05780226665418,1.70630600428187,2.32236671860439,3.99489130098489,1.81515172161008,1.11189021922435,3.80451252225118,2.37264530772256,1.4822905925161,1.75934646160189,1.98956472041151,1.9496408711912,0,0.648414149624083,0.995706366271836,3.41402221715547,2.85621281524322,2.25415471346161,3.25842124552503,4.65485969202302,5.11991485199326,5.37510565556187,3.69025369949005,4.23896565171712,3.20832626196681,2.37162101669719,3.67059232575407,1.96558995113203,3.59779379815766,4.05720242777006,3.37648023653384,4.58326533206556,2.87696137450811,5.83686816390127,6.31491250332587,23.0029130443767,8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|EntrezGene=14630
|HGNC=
|UniProt=O09172,Q4FJZ6
|association_with_transcript=0bp_to_NM_008129,uc008reo.1_5end
|description=CAGE_peak_4_at_Gclm_5end
|id=chr3:121948499..121948526,+
|ontology_enrichment_celltype=CL:0000055!7.61e-08!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!2.23e-14!114;UBERON:0004111!4.05e-14!122;UBERON:0004121!4.35e-12!102;UBERON:0000924!4.35e-12!102;UBERON:0006601!4.35e-12!102;UBERON:0001017!8.88e-12!73;UBERON:0005743!8.88e-12!73;UBERON:0000073!5.91e-11!75;UBERON:0001016!5.91e-11!75;UBERON:0002346!1.32e-08!71;UBERON:0003075!1.32e-08!71;UBERON:0007284!1.32e-08!71;UBERON:0002616!1.43e-08!49;UBERON:0000955!1.44e-08!50;UBERON:0006238!1.44e-08!50;UBERON:0000033!4.88e-08!63;UBERON:0001049!5.42e-07!52;UBERON:0005068!5.42e-07!52;UBERON:0006241!5.42e-07!52;UBERON:0007135!5.42e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.22e-14,114;UBERON:0004111,4.02e-14,122;UBERON:0001017,8.82e-12,73;UBERON:0004121,4.86e-11,95;UBERON:0000924,4.86e-11,95;UBERON:0006601,4.86e-11,95;UBERON:0001016,5.88e-11,75;UBERON:0010314,2.22e-10,92;UBERON:0000073,5.46e-08,54;UBERON:0010371,9.15e-08,73;UBERON:0002346,1.01e-07,64;UBERON:0003075,1.01e-07,64;UBERON:0007284,1.01e-07,64;UBERON:0000955,4.61e-07,47;UBERON:0006238,4.61e-07,47;UBERON:0002616,4.69e-07,46;UBERON:0001049,5.41e-07,52;UBERON:0005068,5.41e-07,52;UBERON:0006241,5.41e-07,52;UBERON:0007135,5.41e-07,52
|phase1_expression=3.04282809499109,0.697950815278722,0.454999239389536,0.60492842261366,0,0.33575854382378,0.233612640595526,2.1950964985068,0.84473233291,1.40438715793196,3.5955773327356,4.62678522172951,1.54080656938085,1.74840804837995,2.6648780945253,1.61980213911861,4.19737126876888,1.10411757875383,1.91960207048034,2.12194825899015,3.74190476664707,3.17731043842833,3.6567970479451,2.23989391910769,1.37645568640302,0,0.430761996159075,1.07735616342945,0.190023419456374,0.756090389279792,1.77384408524244,0.635030673459631,0.61506478758457,0,1.73310971850765,1.49611180822643,0.408338712524738,1.25559489221072,4.6880120671428,0,2.94115744015507,2.04913645487534,0.971020706062307,6.6725313527056,5.67710814829281,4.58866880404204,9.38869613217647,12.209408757305,7.0299578475031,6.9994763666742,6.15940255151595,8.62515386189829,0.838913030288682,2.90144856804538,0.672187598284928,3.60163210450326,4.01146815914259,4.64104883049698,2.83243045203437,1.5869729378161,3.1691570175309,3.38844532069132,5.33576877666684,2.6996991518442,2.96659908770092,2.8419204597844,6.89080254192331,8.83702102239575,3.00699875694585,4.45519596494579,5.04779907243317,2.28520787523043,4.19650227808066,4.04219637409348,3.45043695665651,1.83843757322004,13.2139057199266,9.57655035638908,9.98442466165583,2.37395317914349,2.8361169516747,2.6045668527838,9.49222196604695,7.87867654044352,9.16789486660861,5.59794312399969,2.70506193518296,2.23679334990361,1.96888102666279,2.34271836331035,2.02905142091174,4.30211938490693,5.439770669662,10.2543606411185,5.84798775702902,4.03224198387602,5.33688796500657,6.13549161281008,4.1565760736459,6.00677276667578,3.38024207464033,1.28326477414318,2.54805239706646,0,2.59789249213457,1.77351905832569,1.51657333504435,3.4255163915718,1.29468941823586,4.45326417194474,4.16364784238726,2.43572382649713,5.30415643688935,3.46662073271032,4.58595957829249,4.90099706185734,3.46072954828123,3.03658649531814,4.42305275974937,3.558870698843,3.3126227769059,1.93950101254089,0,7.90508151931177,9.42510180660548,2.29911349687732,1.7972268675888,4.19931911695385,2.41433431438823,6.14141621559773,6.8625090422794,2.38743269014442,5.21472960576829,2.30143911597297,6.64921742590592,4.38051410282946,5.39748628406676,2.73695335342205,4.80173241023982,5.89237196482127,2.34216797332867,2.98872735763515,3.06105620669094,3.46621081022145,4.76255494059295,3.07472928683639,3.5606655332697,5.17406741478031,2.80238390812695,2.26927296201383,2.28736461413134,5.04150184583422,2.78047249225598,2.78601733217733,2.88094990971121,2.9855140022774,1.40442637462647,2.31613116403244,0.568326998791185,3.52113813310353,3.04883877975425,3.42117916775928,5.44512891845984,4.13204886669548,4.31947916084659,3.48800917125612,4.02410102099429,5.13767506415546,5.10135534731789,2.79084688934462,4.62092214411378,3.07019973593198,4.17145219052996,4.02619256281115,4.6263788684108,4.32199371992995,1.65209391491899,1.05780226665418,1.70630600428187,2.32236671860439,3.99489130098489,1.81515172161008,1.11189021922435,3.80451252225118,2.37264530772256,1.4822905925161,1.75934646160189,1.98956472041151,1.9496408711912,0,0.648414149624083,0.995706366271836,3.41402221715547,2.85621281524322,2.25415471346161,3.25842124552503,4.65485969202302,5.11991485199326,5.37510565556187,3.69025369949005,4.23896565171712,3.20832626196681,2.37162101669719,3.67059232575407,1.96558995113203,3.59779379815766,4.05720242777006,3.37648023653384,4.58326533206556,2.87696137450811,5.83686816390127,6.31491250332587,23.0029130443767,8.93138274404408,7.17686648163489,4.54641980304801,3.22915344339442,3.37710464954357,3.32555742299888,1.89491411770485,3.42226450528254,3.56464680127895,5.16318546234705,3.68513766371995,5.95109102215034,4.68320754858717,4.72905432318573,4.65075848262427,6.85655505227195,2.62181303545181,3.10832967358612,2.89298117163023,1.50791283939272,1.63171705145613,2.45882136509518,3.58717770196152,6.10092241953609,8.43924143463863,3.77050374366353,3.28212205365685,3.47059041357882,4.29482618726302,5.17016154558717,5.9742199488138,4.23317480756549,5.09537755419898,6.47697122679831,4.67609372658099,5.92931666919785,3.53453448063988,5.25178315270594,4.80777129901589,5.53815661802159,2.96946221350564,1.32745138339963,6.31229654002952,4.83717691143602,3.39489143560617,3.83892460745005,1.84461088766356,1.80899805217755,2.90826983582004,2.49548164869305,1.8962205476149,1.05418608574999,1.03135543248187,4.08527526904546,4.50152735078276,3.75140182969988,1.50035924522115,3.3694644392032,4.63758925765383,3.1264313914403,2.13125464380219,2.11204537257339,1.69465656691056,3.30792597082443,2.30840754118072,4.52100394748536,4.52346936961169,4.05865969610664,4.43180429311665,2.91480836629851,8.15871328846243,4.10090113914846,3.09580301944834,2.96311243791539,2.63715839806567,2.7338845544205,2.0590035588587,2.37969801991397,1.95932033253121,1.65839968565309,1.90934123603023,2.84702394223022,3.45643094115643,3.56417624711944,3.13632444021703,2.83871332870031,5.12484516262319,4.79390043206948,1.57053565190418,1.16653475962614,1.86401793926078,7.89170114157866,3.43888055901151,3.47462829959905,3.88902376688095,4.52059382172059,4.39285926276023,6.21993364822496,5.07797100891405,4.71867049915699,7.24752362478018,4.60848010012585,1.26404448251271,3.04087822935246,3.28675062927447,2.5984164595559,2.32734704367726,4.17230845040656,2.28371354087941,2.36303243479324,1.71642964911851,2.43861781295999,2.11734988787365,2.0466154955348,1.25075394132428,1.40252282617883,3.40095575422817,4.21773311410723,2.33256027184637,1.34307693091263,4.25017106870819,3.19060208267009,2.93042598827624,3.42989406526505,4.01257683228291,5.64751842617067,3.68260189205742,1.71868654031819,4.1244763762485,6.16574267793578,3.7769694869485,2.70009000092722,7.20513925158753,4.07828168085784,4.14208249401456,3.32119512269365,1.99512436700516,1.53660245178721,3.16038732188782,5.03071590307158,2.5738091183002,3.33370091702423,2.26638562962784,1.60459604795908,2.27427490587418,3.29523089857312,3.77252682772152,3.183811253976,2.94515701062399,3.0440798546475,2.38146845641537,2.43357084484197,2.31491064556446,1.64834360321323,3.23837624295674,1.71434626192708,2.30718548007139,3.57654284920981,3.48831399917588,2.63506265162926,3.38458431566706,2.56099162021882,2.89376682581627,3.25929873230068,1.68342681497322,2.84724043498018,3.34915240076916,4.50154147486658,2.32405261778949,1.92906610981141,2.99772693525535,1.87145286756327,5.58664740525576,4.97349663378993,4.63241980150983,3.94175320554716
|short_description=p4@Gclm
}}

Revision as of 01:23, 14 September 2013

Short description:p4@Gclm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gclm_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_008129, uc008reo.1_5end
EntrezGene:Gclm
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Gclm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.21
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.76
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.12
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E66.86
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A38.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D43.56
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A94.79
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube2.22e-14114
anatomical conduit4.02e-14122
central nervous system8.82e-1273
ectoderm-derived structure4.86e-1195
ectoderm4.86e-1195
presumptive ectoderm4.86e-1195
nervous system5.88e-1175
structure with developmental contribution from neural crest2.22e-1092
regional part of nervous system5.46e-0854
ecto-epithelium9.15e-0873
neurectoderm1.01e-0764
neural plate1.01e-0764
presumptive neural plate1.01e-0764
brain4.61e-0747
future brain4.61e-0747
regional part of brain4.69e-0746
neural tube5.41e-0752
neural rod5.41e-0752
future spinal cord5.41e-0752
neural keel5.41e-0752







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