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FFCP PHASE1:Mm9::chr2:84574207..84574264,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=241525|HGNC=|MCL_coexpression_id=704|UniProt=Q65Z93,A2ATR6|association_with_transcript=0bp_to_ENSMUST00000090729,ENSMUST00000111643_5end|description=CAGE_peak_1_at_Ypel4_5end|id=chr2:84574207..84574264,+|ontology_enrichment_celltype=CL:0000540!6.39e-07!33;CL:0000047!6.39e-07!33;CL:0000031!6.39e-07!33;CL:0000404!6.39e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,5.58e-07,33;CL:0000047,5.58e-07,33;CL:0000031,5.58e-07,33;CL:0000404,5.58e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.02e-17!73;UBERON:0005743!1.02e-17!73;UBERON:0000073!2.14e-16!75;UBERON:0001016!2.14e-16!75;UBERON:0000955!2.57e-16!50;UBERON:0006238!2.57e-16!50;UBERON:0002346!8.95e-16!71;UBERON:0003075!8.95e-16!71;UBERON:0007284!8.95e-16!71;UBERON:0002616!1.18e-15!49;UBERON:0000033!1.81e-15!63;UBERON:0001049!5.15e-15!52;UBERON:0005068!5.15e-15!52;UBERON:0006241!5.15e-15!52;UBERON:0007135!5.15e-15!52;UBERON:0004121!1.17e-14!102;UBERON:0000924!1.17e-14!102;UBERON:0006601!1.17e-14!102;UBERON:0003056!1.13e-12!49;UBERON:0003080!2.29e-12!40;UBERON:0002780!7.96e-12!39;UBERON:0001890!7.96e-12!39;UBERON:0006240!7.96e-12!39;UBERON:0002020!4.27e-10!34;UBERON:0002791!9.76e-10!29;UBERON:0003528!9.76e-10!29;UBERON:0001893!9.76e-10!29;UBERON:0000025!2.19e-07!114;UBERON:0000956!2.36e-07!21;UBERON:0001869!2.36e-07!21;UBERON:0000203!2.36e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.40e-18,73;UBERON:0001016,1.28e-16,75;UBERON:0000073,2.80e-16,54;UBERON:0002346,8.31e-16,64;UBERON:0003075,8.31e-16,64;UBERON:0007284,8.31e-16,64;UBERON:0001049,3.68e-15,52;UBERON:0005068,3.68e-15,52;UBERON:0006241,3.68e-15,52;UBERON:0007135,3.68e-15,52;UBERON:0000955,8.48e-15,47;UBERON:0006238,8.48e-15,47;UBERON:0004121,3.58e-14,95;UBERON:0000924,3.58e-14,95;UBERON:0006601,3.58e-14,95;UBERON:0002616,3.78e-14,46;UBERON:0010371,8.89e-14,73;UBERON:0003056,8.59e-13,49;UBERON:0003080,1.75e-12,40;UBERON:0002780,6.15e-12,39;UBERON:0001890,6.15e-12,39;UBERON:0006240,6.15e-12,39;UBERON:0010314,4.49e-11,92;UBERON:0002020,3.45e-10,34;UBERON:0003528,7.95e-10,29;UBERON:0002791,7.95e-10,29;UBERON:0001893,7.95e-10,29;UBERON:0000025,1.48e-07,114;UBERON:0000956,2.04e-07,21;UBERON:0001869,2.04e-07,21;UBERON:0000203,2.04e-07,21|phase1_expression=8.64803774365887,0,0,0,0,0.16787927191189,0,2.06597317506522,2.111830832275,1.87251621057595,0.856089841127525,0.159544317990673,0,0.611942816932982,124.916160680874,270.102006698028,246.245781101108,0,0.274228867211478,7.63901373236454,20.0702164756525,0,0,0,0,0,0,0,0,0,0,17.7808588568697,15.9916844771988,0,0,0,0,2.51118978442145,0,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,7.80560271448579,7.90740063512214,4.22157529971868,4.69434806608824,3.70642765846759,5.4921545683618,4.86074747685709,2.37976916763116,0,0,2.90144856804538,0.336093799142464,2.05807548828758,4.58453503902011,1.54701627683233,12.5436205732951,10.5798195854407,8.23980824558033,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,7.19040265244171,12.2949857702897,11.0947885170071,15.3906769698127,11.1472229516232,8.85518051651791,10.6016899656774,7.83941114975706,10.0637744569148,11.9498442259303,81.4857519395476,87.721201264524,79.1073646269654,16.2220133908138,15.186948838,15.106487746146,77.3336907233825,43.895483582471,65.5504482962515,11.7851434189467,10.2507610175354,9.31997229126503,0.302904773332736,1.20914496170857,2.6087803983151,0,0,0.539703191637817,0,0,14.6062196937022,5.79463096765396,5.71529210126311,6.00677276667578,6.90132756905734,5.13305909657271,5.09610479413291,7.11066703153331,1.08245520505607,1.26679932737549,0.505524445014783,4.5673551887624,1.03575153458869,10.5393918736026,7.98032503124225,10.0473607843007,8.53277339847416,5.42601505989441,14.6985883919631,2.51333182659351,0.988779870937496,5.49477556295664,68.9996230520902,14.7207833452142,69.1233952781032,100.854052652126,0,131.165797061173,95.0888048933086,1.27728527604296,0.718890747035522,0,0.127070227073065,90.4735462005129,61.7625813805146,8.04187853522332,90.562470820176,59.8374170152973,78.1283047543946,62.94961007029,5.6011650117674,41.5519281837711,0.758168275301024,13.6787206326208,5.33493816147085,4.13823787980251,7.02242306240862,13.2620239695429,8.98081788797528,8.83984669965463,7.49613796477831,18.3679393224701,2.37124792226126,8.69887968771969,5.98233822157426,5.2606975782618,6.67313398141435,4.179025998266,5.35033554660653,2.58744546864041,0,0,0.284163499395593,9.52778553663309,9.14651633926275,4.32148947506436,3.07768156260773,2.75469924446365,1.3884040159864,2.79040733700489,0.804820204198858,2.56883753207773,0.822799249567402,2.95501435342371,3.24275238183423,2.04679982395465,1.3173006917463,3.89198614405078,90.6349678311388,11.3195073617213,0.330418782983798,1.32225283331772,3.83918850963421,8.36052018697579,7.47431275668141,3.22693639397348,4.22518283305254,2.66315876557583,3.32170343081158,1.15289268306808,1.75934646160189,2.3874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|EntrezGene=241525
|HGNC=
|MCL_coexpression_id=704
|UniProt=Q65Z93,A2ATR6
|association_with_transcript=0bp_to_ENSMUST00000090729,ENSMUST00000111643_5end
|description=CAGE_peak_1_at_Ypel4_5end
|id=chr2:84574207..84574264,+
|ontology_enrichment_celltype=CL:0000540!6.39e-07!33;CL:0000047!6.39e-07!33;CL:0000031!6.39e-07!33;CL:0000404!6.39e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000540,5.58e-07,33;CL:0000047,5.58e-07,33;CL:0000031,5.58e-07,33;CL:0000404,5.58e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.02e-17!73;UBERON:0005743!1.02e-17!73;UBERON:0000073!2.14e-16!75;UBERON:0001016!2.14e-16!75;UBERON:0000955!2.57e-16!50;UBERON:0006238!2.57e-16!50;UBERON:0002346!8.95e-16!71;UBERON:0003075!8.95e-16!71;UBERON:0007284!8.95e-16!71;UBERON:0002616!1.18e-15!49;UBERON:0000033!1.81e-15!63;UBERON:0001049!5.15e-15!52;UBERON:0005068!5.15e-15!52;UBERON:0006241!5.15e-15!52;UBERON:0007135!5.15e-15!52;UBERON:0004121!1.17e-14!102;UBERON:0000924!1.17e-14!102;UBERON:0006601!1.17e-14!102;UBERON:0003056!1.13e-12!49;UBERON:0003080!2.29e-12!40;UBERON:0002780!7.96e-12!39;UBERON:0001890!7.96e-12!39;UBERON:0006240!7.96e-12!39;UBERON:0002020!4.27e-10!34;UBERON:0002791!9.76e-10!29;UBERON:0003528!9.76e-10!29;UBERON:0001893!9.76e-10!29;UBERON:0000025!2.19e-07!114;UBERON:0000956!2.36e-07!21;UBERON:0001869!2.36e-07!21;UBERON:0000203!2.36e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.40e-18,73;UBERON:0001016,1.28e-16,75;UBERON:0000073,2.80e-16,54;UBERON:0002346,8.31e-16,64;UBERON:0003075,8.31e-16,64;UBERON:0007284,8.31e-16,64;UBERON:0001049,3.68e-15,52;UBERON:0005068,3.68e-15,52;UBERON:0006241,3.68e-15,52;UBERON:0007135,3.68e-15,52;UBERON:0000955,8.48e-15,47;UBERON:0006238,8.48e-15,47;UBERON:0004121,3.58e-14,95;UBERON:0000924,3.58e-14,95;UBERON:0006601,3.58e-14,95;UBERON:0002616,3.78e-14,46;UBERON:0010371,8.89e-14,73;UBERON:0003056,8.59e-13,49;UBERON:0003080,1.75e-12,40;UBERON:0002780,6.15e-12,39;UBERON:0001890,6.15e-12,39;UBERON:0006240,6.15e-12,39;UBERON:0010314,4.49e-11,92;UBERON:0002020,3.45e-10,34;UBERON:0003528,7.95e-10,29;UBERON:0002791,7.95e-10,29;UBERON:0001893,7.95e-10,29;UBERON:0000025,1.48e-07,114;UBERON:0000956,2.04e-07,21;UBERON:0001869,2.04e-07,21;UBERON:0000203,2.04e-07,21
|phase1_expression=8.64803774365887,0,0,0,0,0.16787927191189,0,2.06597317506522,2.111830832275,1.87251621057595,0.856089841127525,0.159544317990673,0,0.611942816932982,124.916160680874,270.102006698028,246.245781101108,0,0.274228867211478,7.63901373236454,20.0702164756525,0,0,0,0,0,0,0,0,0,0,17.7808588568697,15.9916844771988,0,0,0,0,2.51118978442145,0,0.523523743973798,0.588231488031014,0.683045484958446,0.971020706062307,7.80560271448579,7.90740063512214,4.22157529971868,4.69434806608824,3.70642765846759,5.4921545683618,4.86074747685709,2.37976916763116,0,0,2.90144856804538,0.336093799142464,2.05807548828758,4.58453503902011,1.54701627683233,12.5436205732951,10.5798195854407,8.23980824558033,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,7.19040265244171,12.2949857702897,11.0947885170071,15.3906769698127,11.1472229516232,8.85518051651791,10.6016899656774,7.83941114975706,10.0637744569148,11.9498442259303,81.4857519395476,87.721201264524,79.1073646269654,16.2220133908138,15.186948838,15.106487746146,77.3336907233825,43.895483582471,65.5504482962515,11.7851434189467,10.2507610175354,9.31997229126503,0.302904773332736,1.20914496170857,2.6087803983151,0,0,0.539703191637817,0,0,14.6062196937022,5.79463096765396,5.71529210126311,6.00677276667578,6.90132756905734,5.13305909657271,5.09610479413291,7.11066703153331,1.08245520505607,1.26679932737549,0.505524445014783,4.5673551887624,1.03575153458869,10.5393918736026,7.98032503124225,10.0473607843007,8.53277339847416,5.42601505989441,14.6985883919631,2.51333182659351,0.988779870937496,5.49477556295664,68.9996230520902,14.7207833452142,69.1233952781032,100.854052652126,0,131.165797061173,95.0888048933086,1.27728527604296,0.718890747035522,0,0.127070227073065,90.4735462005129,61.7625813805146,8.04187853522332,90.562470820176,59.8374170152973,78.1283047543946,62.94961007029,5.6011650117674,41.5519281837711,0.758168275301024,13.6787206326208,5.33493816147085,4.13823787980251,7.02242306240862,13.2620239695429,8.98081788797528,8.83984669965463,7.49613796477831,18.3679393224701,2.37124792226126,8.69887968771969,5.98233822157426,5.2606975782618,6.67313398141435,4.179025998266,5.35033554660653,2.58744546864041,0,0,0.284163499395593,9.52778553663309,9.14651633926275,4.32148947506436,3.07768156260773,2.75469924446365,1.3884040159864,2.79040733700489,0.804820204198858,2.56883753207773,0.822799249567402,2.95501435342371,3.24275238183423,2.04679982395465,1.3173006917463,3.89198614405078,90.6349678311388,11.3195073617213,0.330418782983798,1.32225283331772,3.83918850963421,8.36052018697579,7.47431275668141,3.22693639397348,4.22518283305254,2.66315876557583,3.32170343081158,1.15289268306808,1.75934646160189,2.38747766449381,1.55971269695296,0,0.432276099749388,2.19055400579804,3.98302592001472,5.1411830674378,1.1270773567308,3.05476991767971,3.68509725618489,2.03393877681924,1.64414996523069,0.738050739898011,0.470996183524124,0.493588655687202,0,113.62151699266,150.3676312616,219.015697462848,195.962877261294,181.847578453322,145.391361367191,128.600173440512,64.5298202564641,30.201755450689,24.4405951096503,11.1642284300551,3.43241440426017,0,0,0,1.29327233116623,3.41084541186873,3.58522948172457,2.54617628662782,2.34690248288502,2.68010011906905,3.80869825417622,4.09780660501378,4.41378403497335,4.20782910332672,2.55127629851979,2.13022309130459,2.24490476425664,3.18227928879325,6.03165135757089,1.63171705145613,0.983528546038072,2.48343071674259,77.5459349641035,76.5392313447087,1.3114795630134,7.32165688892682,5.67914794949262,7.80877488593277,15.7259080344943,7.40803273652911,8.46634961513098,10.4738316391868,13.7635638569464,16.3663280430335,20.5549644532192,187.009006157492,5.25178315270594,5.1639025063504,7.16702621155735,17.1568927891437,0,4.61283208694465,2.11626489875326,1.88605079755898,3.83892460745005,0.922305443831782,2.06742634534577,1.45413491791002,3.20847640546249,2.52829406348653,1.05418608574999,2.06271086496374,51.7468200745758,5.221771726908,9.83125996748934,9.21649250635847,16.1379612614469,12.8425548673491,11.1893334009442,17.9634319977614,0.469343416127421,0.42366414172764,0.661585194164886,12.366468970611,5.16686165426898,2.53314284698255,2.26807453605959,2.79039529566604,2.91480836629851,80.2891557705507,109.357363710626,6.3979929068599,41.2983796034457,203.437933565066,169.36414814635,141.842467388044,3.90950388985867,3.07893195112048,2.07299960706636,3.81868247206045,5.21954389408873,6.09958401380546,3.34816556547584,2.92723614420256,5.02233896616208,2.83215127408124,6.4469695465762,1.57053565190418,2.85152941241944,0,2.25477175473676,2.69129782879162,2.15096037594227,2.52786544847262,1.42075805825504,2.19642963138012,2.93393096614385,2.21347454234715,1.46803082195995,0.483168241652012,2.88030006257865,0,1.62180172232131,1.1298205288131,0.389762468933385,0.537080087002444,0.79472541912506,0.480781798079875,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.38983152295901,0.192423683280659,0.467507608726276,3.85441652145859,0,0,0,5.79568782096571,7.50729901804728,11.5385523288377,7.5028932677673,0,53.6514250486213,54.3183779078469,56.1437603170609,54.477458802949,78.7844897736239,85.3595104050362,80.3276775275849,118.884797651194,100.144472385509,100.963260791605,2.17953429926771,27.5327162646711,23.7319711998246,54.4559046232979,15.5113740344707,8.45680138870065,24.8916335137809,19.9854005521727,19.5760717851007,16.172621552883,20.5318232911094,22.4465346249431,23.6913013898803,21.4484260556312,19.757801320731,23.3383908728706,15.9920369803901,15.6256468575601,17.7196937345422,21.0494455792188,19.8864166383541,17.9250564220931,18.3595866259437,19.912459078629,23.5273451038327,16.4152339309852,14.8171658026946,20.5194374921517,21.4570499876462,19.0788372363631,15.1852823198943,13.0025916735744,17.187703813127,17.6627998952001,16.7828751553593,5.9954538705107,13.5680332898337,13.1071342969462,5.35607329792761,22.0591419119515,15.7670128221887
|short_description=p1@Ypel4
}}

Revision as of 00:47, 14 September 2013

Short description:p1@Ypel4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ypel4_5end
Coexpression cluster:MCL_coexpression_mm9:704
Association with transcript: 0bp_to_ENSMUST00000090729, ENSMUST00000111643_5end
EntrezGene:Ypel4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ypel4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1124.92
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3270.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5246.25
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D381.49
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F387.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D779.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E477.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I665.55
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C114.70
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G269.00
bone (os femoris), neonate N02.CNhs11227.1985-43F514.72
bone (os femoris), neonate N16.CNhs11225.1525-43A669.12
bone (os femoris), neonate N20.CNhs11195.1350-25C3100.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2131.17
cerebellum, neonate N30.CNhs11135.1395-42I295.09
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A490.47
corpus striatum, adult.CNhs10487.19-21D861.76
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D590.56
cortex, neonate N30.CNhs11107.1392-42F259.84
diencephalon, adult.CNhs10482.20-12F278.13
diencephalon, neonate N30.CNhs11201.1388-42B262.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A241.55
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G413.68
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D413.26
eyeball, neonate N00.CNhs11207.633-15C68.98
eyeball, neonate N01.CNhs11140.1532-43E78.84
eyeball, neonate N02.CNhs11205.1551-44G87.50
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H28.70
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F59.15
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E890.63
hippocampus, neonate N00.CNhs11228.627-43G111.32
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F8113.62
liver, embryo E13.CNhs10524.378-3H6150.37
liver, embryo E14.CNhs10594.409-16E1219.02
liver, embryo E15.CNhs10520.433-16D7195.96
liver, embryo E16.CNhs10523.462-17F5181.85
liver, embryo E17.CNhs10510.481-18A3145.39
liver, embryo E18.CNhs10579.499-43G4128.60
liver, neonate N00.CNhs11117.641-24F464.53
liver, neonate N03.CNhs11123.1345-25G230.20
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C277.55
medulla oblongata, neonate N30.CNhs11200.1396-42A376.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.73
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I9187.01
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I47.17
oviduct, adult pregnant day01.CNhs10500.988-6G617.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G851.75
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C79.83
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B916.14
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F511.19
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H32.53
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C980.29
spleen, adult.CNhs10465.25-2G2109.36
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F241.30
spleen, neonate N10.CNhs11116.752-24D1203.44
spleen, neonate N20.CNhs11112.824-19H1169.36
spleen, neonate N25.CNhs11099.1354-25G3141.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E511.54
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A153.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.14
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A478.78
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A585.36
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A680.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7118.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8100.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.96
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C927.53
whole body, embryo E13.CNhs10512.372-23H223.73
whole body, embryo E14.5.CNhs10578.420-27D254.46
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.05
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.66
whole body, embryo E17.5.CNhs10513.490-9F916.78
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D122.06
whole body, neonate N10.CNhs10518.761-6B415.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.58e-0733
neuronal stem cell5.58e-0733
neuroblast5.58e-0733
electrically signaling cell5.58e-0733

Uber anatomy
Ontology termp-valuen
central nervous system5.40e-1873
nervous system1.28e-1675
regional part of nervous system2.80e-1654
neurectoderm8.31e-1664
neural plate8.31e-1664
presumptive neural plate8.31e-1664
neural tube3.68e-1552
neural rod3.68e-1552
future spinal cord3.68e-1552
neural keel3.68e-1552
brain8.48e-1547
future brain8.48e-1547
ectoderm-derived structure3.58e-1495
ectoderm3.58e-1495
presumptive ectoderm3.58e-1495
regional part of brain3.78e-1446
ecto-epithelium8.89e-1473
pre-chordal neural plate8.59e-1349
anterior neural tube1.75e-1240
regional part of forebrain6.15e-1239
forebrain6.15e-1239
future forebrain6.15e-1239
structure with developmental contribution from neural crest4.49e-1192
gray matter3.45e-1034
brain grey matter7.95e-1029
regional part of telencephalon7.95e-1029
telencephalon7.95e-1029
tube1.48e-07114
cerebral cortex2.04e-0721
cerebral hemisphere2.04e-0721
pallium2.04e-0721







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