FFCP PHASE1:Mm9::chr2:30061194..30061213,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70266|HGNC=|MCL_coexpression_id=19|UniProt=Q05CI8,Q8BTY1|association_with_transcript=5bp_to_NM_172404,uc008jbo.1,uc008jbr.1,uc008jbs.1_5end|description=CAGE_peak_6_at_Ccbl1_5end|id=chr2:30061194..30061213,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.08e-13!43;UBERON:0007100!1.68e-09!18;UBERON:0000948!1.68e-09!18;UBERON:0005498!1.68e-09!18;UBERON:0004140!1.68e-09!18;UBERON:0009881!1.68e-09!18;UBERON:0004141!1.68e-09!18;UBERON:0003084!1.68e-09!18;UBERON:0007005!1.68e-09!18;UBERON:0004139!1.68e-09!18;UBERON:0004291!1.68e-09!18;UBERON:0004535!3.61e-08!23;UBERON:0001009!3.61e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.57e-37,18;UBERON:0000948,1.57e-37,18;UBERON:0005498,1.57e-37,18;UBERON:0004140,1.57e-37,18;UBERON:0009881,1.57e-37,18;UBERON:0004141,1.57e-37,18;UBERON:0003084,1.57e-37,18;UBERON:0007005,1.57e-37,18;UBERON:0004139,1.57e-37,18;UBERON:0004291,1.57e-37,18;UBERON:0004535,1.15e-28,23;UBERON:0001009,1.15e-28,23;UBERON:0003103,6.75e-28,43;UBERON:0004872,5.47e-19,33;UBERON:0003914,4.56e-16,47;UBERON:0010314,5.64e-12,92;UBERON:0004111,7.04e-08,122;UBERON:0000025,8.53e-08,114|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.297872853602656,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.65407546914134,0.439372365468944,0.58328969722285,0.419959264876088,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.675029691658453,0.420649922702764,1.14260393761521,0.662605622854841,0,0.0958454710182364,0,0,0.766124028511126,1.0752457327937,0.791317726381163,0.731901148819277,0,0.837548997004143,0,0.763991238884051,0.883885756421003,1.28134512719193,0.186399445825301,0,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,0.5709193985953,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.60289056221049,0.23517741427141,0.376999773989026,0,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0.254140454146129,0.748953197024114,0.457500602818626,0.251308704225729,0.347648640384553,0.767146371990992,1.24672826735736,0.324482526135515,0.203678727700633,0.248813941220186,0,0.420883711772948,0.260240885925407,0.229902104433473,1.26043490863744,0.452114453507145,0.0680364991513279,0.512454881139399,0.468508622798644,1.29351685369508,0,0,0,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0.772043721344145,0.284163499395593,2.07125772535502,1.64168241986767,1.2604344302271,1.89395788468168,2.95146347621106,2.93107514486019,3.48800917125612,4.29237442239391,5.83826711835847,3.94943639792353,6.07419617092652,5.02626619184305,5.55559952216263,2.85415149878366,2.54992195644706,0.420579897128254,0.205809224758569,0,0,0,0,0.257734922644187,0,0.889512175379481,0.380451252225118,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,1.1270773567308,0.407302655690628,0.969762435838129,0.771494018793504,0.885311519739602,1.77132177575523,1.41298855057237,0.863780147452604,0.296452627087149,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0.717589654087649,1.4473305640901,0,0,0.325929952884052,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0,0,0.491589944147214,0.518054945597687,0,0,0,0,0.275936746304732,0.321101179975584,0.820481806145422,0,1.26235463602186,0,0,0,0.716906393857656,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,1.09060118843252,0,0,0,0,0,0.540183282093931,0.258717367565509,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0,0.241251699712623,0,0,0,0.927126510052548,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0.165306911450672,0,0,0.621339313086926,0,0,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,1.13365191807606,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0,2.2516060161211,0,0,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.962757628775446,0.505394423527595,0.506958599780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| ||
|EntrezGene=70266 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=Q05CI8,Q8BTY1 | |||
|association_with_transcript=5bp_to_NM_172404,uc008jbo.1,uc008jbr.1,uc008jbs.1_5end | |||
|description=CAGE_peak_6_at_Ccbl1_5end | |||
|id=chr2:30061194..30061213,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.08e-13!43;UBERON:0007100!1.68e-09!18;UBERON:0000948!1.68e-09!18;UBERON:0005498!1.68e-09!18;UBERON:0004140!1.68e-09!18;UBERON:0009881!1.68e-09!18;UBERON:0004141!1.68e-09!18;UBERON:0003084!1.68e-09!18;UBERON:0007005!1.68e-09!18;UBERON:0004139!1.68e-09!18;UBERON:0004291!1.68e-09!18;UBERON:0004535!3.61e-08!23;UBERON:0001009!3.61e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.57e-37,18;UBERON:0000948,1.57e-37,18;UBERON:0005498,1.57e-37,18;UBERON:0004140,1.57e-37,18;UBERON:0009881,1.57e-37,18;UBERON:0004141,1.57e-37,18;UBERON:0003084,1.57e-37,18;UBERON:0007005,1.57e-37,18;UBERON:0004139,1.57e-37,18;UBERON:0004291,1.57e-37,18;UBERON:0004535,1.15e-28,23;UBERON:0001009,1.15e-28,23;UBERON:0003103,6.75e-28,43;UBERON:0004872,5.47e-19,33;UBERON:0003914,4.56e-16,47;UBERON:0010314,5.64e-12,92;UBERON:0004111,7.04e-08,122;UBERON:0000025,8.53e-08,114 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.297872853602656,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0.65407546914134,0.439372365468944,0.58328969722285,0.419959264876088,0,0,0,0,0,0.286533439938757,0,0.809265843438391,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.675029691658453,0.420649922702764,1.14260393761521,0.662605622854841,0,0.0958454710182364,0,0,0.766124028511126,1.0752457327937,0.791317726381163,0.731901148819277,0,0.837548997004143,0,0.763991238884051,0.883885756421003,1.28134512719193,0.186399445825301,0,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0.842666520790511,0.170430322578058,0,0,0.281686839553361,0,0,0,0.432982082022428,0,0,0.5709193985953,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.60289056221049,0.23517741427141,0.376999773989026,0,0.289198713839823,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.11981512450592,0,0.254140454146129,0.748953197024114,0.457500602818626,0.251308704225729,0.347648640384553,0.767146371990992,1.24672826735736,0.324482526135515,0.203678727700633,0.248813941220186,0,0.420883711772948,0.260240885925407,0.229902104433473,1.26043490863744,0.452114453507145,0.0680364991513279,0.512454881139399,0.468508622798644,1.29351685369508,0,0,0,0.219195732427575,0,0.348252166522167,0,0.398068533636986,0,0.772043721344145,0.284163499395593,2.07125772535502,1.64168241986767,1.2604344302271,1.89395788468168,2.95146347621106,2.93107514486019,3.48800917125612,4.29237442239391,5.83826711835847,3.94943639792353,6.07419617092652,5.02626619184305,5.55559952216263,2.85415149878366,2.54992195644706,0.420579897128254,0.205809224758569,0,0,0,0,0.257734922644187,0,0.889512175379481,0.380451252225118,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,1.1270773567308,0.407302655690628,0.969762435838129,0.771494018793504,0.885311519739602,1.77132177575523,1.41298855057237,0.863780147452604,0.296452627087149,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0.717589654087649,1.4473305640901,0,0,0.325929952884052,0.169745085775188,0,0,0,0.195133647857799,0.472905432318573,0,0,0.491589944147214,0.518054945597687,0,0,0,0,0.275936746304732,0.321101179975584,0.820481806145422,0,1.26235463602186,0,0,0,0.716906393857656,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,1.09060118843252,0,0,0,0,0,0.540183282093931,0.258717367565509,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0,0.241251699712623,0,0,0,0.927126510052548,0,0,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0,0.165306911450672,0,0,0.621339313086926,0,0,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,1.13365191807606,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0,2.2516060161211,0,0,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0.666740183404846,0.206035057238894,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.655490552289177,0.640251524048693,0.516919220600519,0,0.347652977834566,0.578727661391115,0.824171801606613,0.735994600671987,0,0.532427418478012,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.548783918618318,0.263069711437843,0.543216455383447,0,0.474540072496697,0.591026894253381,0.409231043169689,0.619747364743864,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p6@Ccbl1 | |||
}} |
Revision as of 23:41, 13 September 2013
Short description: | p6@Ccbl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ccbl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 5bp_to_NM_172404, uc008jbo.1, uc008jbr.1, uc008jbs.1_5end |
EntrezGene: | Ccbl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.57e-37 | 18 |
heart | 1.57e-37 | 18 |
primitive heart tube | 1.57e-37 | 18 |
primary heart field | 1.57e-37 | 18 |
anterior lateral plate mesoderm | 1.57e-37 | 18 |
heart tube | 1.57e-37 | 18 |
heart primordium | 1.57e-37 | 18 |
cardiac mesoderm | 1.57e-37 | 18 |
cardiogenic plate | 1.57e-37 | 18 |
heart rudiment | 1.57e-37 | 18 |
cardiovascular system | 1.15e-28 | 23 |
circulatory system | 1.15e-28 | 23 |
compound organ | 6.75e-28 | 43 |
splanchnic layer of lateral plate mesoderm | 5.47e-19 | 33 |
epithelial tube | 4.56e-16 | 47 |
structure with developmental contribution from neural crest | 5.64e-12 | 92 |
anatomical conduit | 7.04e-08 | 122 |
tube | 8.53e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.