FFCP PHASE1:Mm9::chr2:178190105..178190122,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=815|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:178190105..178190122,+|id=chr2:178190105..178190122,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,7.89e-34,3;CL:0000359,7.89e-34,3;CL:0002539,7.89e-34,3;CL:0000514,7.89e-34,3;CL:0000680,2.49e-17,6;CL:0000187,2.49e-17,6;CL:0000056,2.49e-17,6;CL:0002293,8.79e-16,3;CL:0000222,5.81e-15,7;CL:0000355,8.55e-12,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000947!8.04e-07!4;UBERON:0001637!8.04e-07!4;UBERON:0003509!8.04e-07!4;UBERON:0004573!8.04e-07!4;UBERON:0004571!8.04e-07!4;UBERON:0010191!8.04e-07!4;UBERON:0004572!8.04e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.89e-34,3;UBERON:0004237,7.89e-34,3;UBERON:0004695,7.89e-34,3;UBERON:0002111,7.89e-34,3;UBERON:0004178,7.89e-34,3;UBERON:0000947,1.36e-25,4;UBERON:0001637,1.36e-25,4;UBERON:0004573,1.36e-25,4;UBERON:0003509,1.36e-25,4;UBERON:0004571,1.36e-25,4;UBERON:0010191,1.36e-25,4;UBERON:0004572,1.36e-25,4;UBERON:0000055,1.22e-20,5;UBERON:0007500,1.22e-20,5;UBERON:0001981,1.22e-20,5;UBERON:0002049,1.22e-20,5;UBERON:0007798,1.22e-20,5;UBERON:0004537,1.22e-20,5;UBERON:0006965,1.22e-20,5;UBERON:0001134,8.55e-12,9;UBERON:0002036,8.55e-12,9;UBERON:0002385,8.55e-12,9;UBERON:0000486,8.55e-12,9;UBERON:0007503,8.55e-12,9;UBERON:0001015,8.55e-12,9;UBERON:0002329,8.55e-12,9;UBERON:0003082,8.55e-12,9;UBERON:0003059,8.55e-12,9;UBERON:0007282,8.55e-12,9;UBERON:0004290,8.55e-12,9;UBERON:0009618,8.55e-12,9;UBERON:0000383,1.11e-10,10;UBERON:0007524,9.05e-10,11;UBERON:0003077,9.05e-10,11;UBERON:0007285,9.05e-10,11|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8271263458996,9.12392380975631,7.52541683862894,0.782391344348039,1.09012578190223,0.878744730937887,0.388859798148567,0.419959264876088,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852151612890289,1.55871602761721,1.41335829804136,0,11.5493829672886,2.54805239706646,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0.433798070759735,0,0.323533699894818,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459804208866946,0.360124259610698,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.477489376012546,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr2:178190105..178190122,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=815 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:178190105..178190122,+ | |||
|id=chr2:178190105..178190122,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.89e-34,3;CL:0000359,7.89e-34,3;CL:0002539,7.89e-34,3;CL:0000514,7.89e-34,3;CL:0000680,2.49e-17,6;CL:0000187,2.49e-17,6;CL:0000056,2.49e-17,6;CL:0002293,8.79e-16,3;CL:0000222,5.81e-15,7;CL:0000355,8.55e-12,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!8.04e-07!4;UBERON:0001637!8.04e-07!4;UBERON:0003509!8.04e-07!4;UBERON:0004573!8.04e-07!4;UBERON:0004571!8.04e-07!4;UBERON:0010191!8.04e-07!4;UBERON:0004572!8.04e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.89e-34,3;UBERON:0004237,7.89e-34,3;UBERON:0004695,7.89e-34,3;UBERON:0002111,7.89e-34,3;UBERON:0004178,7.89e-34,3;UBERON:0000947,1.36e-25,4;UBERON:0001637,1.36e-25,4;UBERON:0004573,1.36e-25,4;UBERON:0003509,1.36e-25,4;UBERON:0004571,1.36e-25,4;UBERON:0010191,1.36e-25,4;UBERON:0004572,1.36e-25,4;UBERON:0000055,1.22e-20,5;UBERON:0007500,1.22e-20,5;UBERON:0001981,1.22e-20,5;UBERON:0002049,1.22e-20,5;UBERON:0007798,1.22e-20,5;UBERON:0004537,1.22e-20,5;UBERON:0006965,1.22e-20,5;UBERON:0001134,8.55e-12,9;UBERON:0002036,8.55e-12,9;UBERON:0002385,8.55e-12,9;UBERON:0000486,8.55e-12,9;UBERON:0007503,8.55e-12,9;UBERON:0001015,8.55e-12,9;UBERON:0002329,8.55e-12,9;UBERON:0003082,8.55e-12,9;UBERON:0003059,8.55e-12,9;UBERON:0007282,8.55e-12,9;UBERON:0004290,8.55e-12,9;UBERON:0009618,8.55e-12,9;UBERON:0000383,1.11e-10,10;UBERON:0007524,9.05e-10,11;UBERON:0003077,9.05e-10,11;UBERON:0007285,9.05e-10,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8271263458996,9.12392380975631,7.52541683862894,0.782391344348039,1.09012578190223,0.878744730937887,0.388859798148567,0.419959264876088,0,0,0,0,0.514518872071894,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852151612890289,1.55871602761721,1.41335829804136,0,11.5493829672886,2.54805239706646,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0.433798070759735,0,0.323533699894818,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459804208866946,0.360124259610698,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.477489376012546,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.419226325255965,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:178190105..178190122,+ | |||
}} |
Revision as of 23:10, 13 September 2013
Short description: | p@chr2:178190105..178190122, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:178190105..178190122, + |
Coexpression cluster: | MCL_coexpression_mm9:815 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.89e-34 | 3 |
vascular associated smooth muscle cell | 7.89e-34 | 3 |
aortic smooth muscle cell | 7.89e-34 | 3 |
smooth muscle myoblast | 7.89e-34 | 3 |
muscle precursor cell | 2.49e-17 | 6 |
muscle cell | 2.49e-17 | 6 |
myoblast | 2.49e-17 | 6 |
epithelial cell of thymus | 8.79e-16 | 3 |
mesodermal cell | 5.81e-15 | 7 |
multi-potent skeletal muscle stem cell | 8.55e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 7.89e-34 | 3 |
blood vessel smooth muscle | 7.89e-34 | 3 |
arterial system smooth muscle | 7.89e-34 | 3 |
artery smooth muscle tissue | 7.89e-34 | 3 |
aorta smooth muscle tissue | 7.89e-34 | 3 |
aorta | 1.36e-25 | 4 |
artery | 1.36e-25 | 4 |
systemic artery | 1.36e-25 | 4 |
arterial blood vessel | 1.36e-25 | 4 |
systemic arterial system | 1.36e-25 | 4 |
aortic system | 1.36e-25 | 4 |
arterial system | 1.36e-25 | 4 |
vessel | 1.22e-20 | 5 |
epithelial tube open at both ends | 1.22e-20 | 5 |
blood vessel | 1.22e-20 | 5 |
vasculature | 1.22e-20 | 5 |
vascular system | 1.22e-20 | 5 |
blood vasculature | 1.22e-20 | 5 |
vascular cord | 1.22e-20 | 5 |
skeletal muscle tissue | 8.55e-12 | 9 |
striated muscle tissue | 8.55e-12 | 9 |
muscle tissue | 8.55e-12 | 9 |
multilaminar epithelium | 8.55e-12 | 9 |
epithelial vesicle | 8.55e-12 | 9 |
musculature | 8.55e-12 | 9 |
somite | 8.55e-12 | 9 |
myotome | 8.55e-12 | 9 |
presomitic mesoderm | 8.55e-12 | 9 |
presumptive segmental plate | 8.55e-12 | 9 |
dermomyotome | 8.55e-12 | 9 |
trunk paraxial mesoderm | 8.55e-12 | 9 |
musculature of body | 1.11e-10 | 10 |
dense mesenchyme tissue | 9.05e-10 | 11 |
paraxial mesoderm | 9.05e-10 | 11 |
presumptive paraxial mesoderm | 9.05e-10 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.