FFCP PHASE1:Mm9::chr2:152119599..152119620,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=67231|HGNC=|MCL_coexpression_id=0|UniProt=Q0P648,Q9D9I4|association_with_transcript=0bp_to_ENSMUST00000140482,NM_024196,uc008nfb.1,uc012cgc.1_5end|description=CAGE_peak_1_at_Tbc1d20_5end|id=chr2:152119599..152119620,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=31.5493228796444,142.381966316859,155.154740631832,153.046890921256,176.816192671061,64.4656404141657,55.8334211023306,37.7040104449403,49.5576301973867,47.7491633696867,30.8192342805909,29.7550153052605,45.5393941617007,41.4372707466048,23.6507930889121,23.0821804824402,16.0899231969474,54.2594924416169,50.1838826997004,59.4145512517242,140.661601909869,32.6667229450913,25.0751797573378,64.6369388085363,68.1345564769495,109.104073181854,112.859642993678,88.9896190992722,86.0806090137374,65.0237734780621,55.6543581744815,22.2260735710871,23.9875267157982,0,28.8851619751275,24.2702582223399,22.0502904763359,128.489210636231,82.8215465195228,96.3283688911789,128.822695878792,122.94818729252,117.493505433539,36.8877676668441,41.1590340751229,44.7854075274503,67.2856556139314,48.4015847164591,40.8616299886118,42.3857179981938,52.6348945311363,41.6882436658418,69.9653467260761,42.7963663786693,45.7087566833751,53.252703259441,63.610423666404,54.1455696891314,24.6826082248709,26.9785399428737,26.6209189472595,67.4300618817573,49.8005085822238,125.985960419396,124.597161683439,127.175940575352,65.912024314049,63.0118020727349,19.0788886647599,25.1111045296945,24.3976955167603,36.8489769880907,32.4676755198872,20.5784542681123,24.4405951096503,17.4651569455904,26.4278114398533,27.9635270406561,28.2636021191488,26.509143833769,27.5377807243253,19.7947080811569,28.1974828991395,29.2636557216474,23.9893249009592,23.8649154233671,24.7726724590439,23.8591290656385,51.418085273232,44.8895067034306,65.7992389352809,45.6024654800135,43.518165357296,29.6836755400799,25.3412802804591,34.9460971935922,58.284434354677,38.6876832252191,45.462550805502,42.4007489412408,27.1827800168993,55.1803852881567,73.8935195149272,63.9960032837998,29.2262905365139,26.6027858748854,33.8701378159905,60.7458240105399,43.760502336372,56.5564549836982,29.6659908770092,29.2286859179656,46.5843304457238,47.1761864929709,55.384281060917,57.8066320116507,83.7990940619527,124.933844378804,22.9998743506967,35.7504738383774,37.1013751013461,41.6992717696291,27.9587641827183,21.0802173848314,28.9036455402568,67.6961196302767,20.2487560415005,17.3971791988088,19.8229554233981,24.2660835835813,34.312545211397,22.1151659718641,29.550134432687,28.8958466783273,28.0513860155406,36.17980166411,41.550460450929,43.9156606253628,38.4138592819186,151.307694382375,24.3325228340256,25.289231487682,30.6105620669094,26.5240479390859,24.7652856910833,27.288222420673,27.5483070205603,60.0191820114516,27.8082710883366,28.1768059450051,29.7357399837074,43.6199507530874,29.751055667139,37.2629818178718,36.8350024170219,31.8454826909589,16.8531164955176,25.7347907114715,25.2905514462077,28.5833566098993,26.9704968978261,31.5108607556776,27.9358787990548,33.6466836288061,27.3052789810659,33.0198201545579,39.7044634071436,41.334931197978,43.1146806773319,38.4151865945083,45.4796021552251,41.6669964162197,43.0318225970459,49.6563749413376,25.2347938276953,23.3593470100976,79.6309266990953,83.56637906568,22.1819780556643,32.5131340604614,30.9281907173024,39.1266037769284,44.2532307251292,41.6594121186505,56.9434873853414,64.5619902518123,44.9890023752482,54.3151168672342,51.4705189994477,62.0185391971413,51.4408558701772,64.7209138076693,27.3121777372438,25.2489212867501,34.9393980586549,25.4564159806643,26.3775382547971,30.7896249318498,32.693289693241,37.4929775868189,28.2597710114475,40.7210640941942,41.5033677922008,19.1871871573508,20.4421354917731,21.1370385641763,17.2431103180227,17.364755502174,17.0599320693551,31.93427125704,19.2940919862292,18.9447375099776,8.62609239164127,32.3762624471598,30.8917296383415,29.5517287198121,25.8332275471554,33.2886029740723,51.7308932466493,26.5287976478679,28.5188708773545,28.6869194960068,24.6424760702927,34.6737952904559,55.4641683264412,64.003836497358,45.5565566466892,46.9505142055403,48.4742496718761,43.751505029102,47.8337399768531,56.9917290811156,101.030160239312,108.781136763742,119.498718343626,80.0216564283724,19.5871719785106,27.1931112893911,33.2787939114651,42.667586697539,25.5561657727168,32.0159770323244,29.2975820916607,32.7387253194996,33.4198011123591,34.8184132870264,29.1463705205924,40.331308391761,26.0889933444706,26.9909905794318,32.0784592570687,40.9550888434687,48.8660878060728,35.4685764390951,67.7000205533811,25.734747432428,22.9765903293211,27.724946724117,44.2952839321159,43.6557910080377,51.6856586336442,36.3533729477506,33.8672509465485,45.8253299006933,50.6009321159994,61.8813259489121,55.1512161321137,21.7873923777885,31.6928775267749,31.2932071146125,34.9360260275279,40.6680904132721,38.1753727796921,59.9795949755761,47.6383567369332,78.3778662196135,56.6757983001252,48.4765583647951,43.4339307811986,44.6315644468353,48.5845440092765,47.9291427255579,50.1347039003343,25.0324157714188,31.4402420668049,32.4027382702259,30.5570970160024,22.6042148405629,23.9214898511794,25.8519335723371,26.3466566490476,28.8299991786735,27.6399947608848,46.7788602827406,27.9957354319305,29.0746837991394,28.9454313402427,28.8541848499967,30.789121488211,40.0547108762918,40.1695794825133,38.2163675296683,55.4752085688873,93.2008969630388,925.583805319441,34.5383221361591,37.228160352847,38.1124329154333,39.5229059841857,39.7046894903329,46.3561092650728,42.3164250742838,50.8567820464698,64.9861285021956,186.355414048839,30.3370675803051,26.5570032030115,24.5479187623937,21.566856614314,24.3476306107775,24.4378066380956,25.1208489496735,23.7780138751069,29.8860691846517,23.31928283643,27.2230699869469,27.3856644878704,31.2688485331071,31.7905173933868,38.0907044473555,28.8581739386284,25.0301659940437,25.686346303704,38.8311084004703,57.6185199635129,37.1797797262548,37.5144663388365,46.1446335712534,25.9785847603851,24.3972375348804,22.9158205375759,30.7617196395201,21.9226406326606,30.215755895588,22.9507650078814,27.0192721934532,23.5634052671786,25.888015587591,29.9945434518271,46.6859101879206,23.9027048055788,35.9797941261075,32.9092665325932,38.0556062491529,36.2262166316633,33.9957844444175,31.1291633304061,32.8506375292937,38.5288535833164,36.0276312047406,37.0820369580734,36.1101859563463,36.52895825577,41.4375511416274,46.3537303779422,40.1251178564507,23.9009822465918,40.4797030369593,37.3727485100103,40.8194354166476,42.9185141905178,34.5924471584942,35.3851270361643,37.8227297275794,38.9636582219006,43.4065023872441,36.5313066245368,57.7976539807471,38.5563808903566,39.3032884678498,48.698494137193,37.1848418846318,34.5302833656243,34.4738597554365,34.8558096583658,48.3459871608671,74.7937378389178,52.7213491695642,54.2570735351786|short_description=p1@Tbc1d20}} | ||
|EntrezGene=67231 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q0P648,Q9D9I4 | |||
|association_with_transcript=0bp_to_ENSMUST00000140482,NM_024196,uc008nfb.1,uc012cgc.1_5end | |||
|description=CAGE_peak_1_at_Tbc1d20_5end | |||
|id=chr2:152119599..152119620,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=31.5493228796444,142.381966316859,155.154740631832,153.046890921256,176.816192671061,64.4656404141657,55.8334211023306,37.7040104449403,49.5576301973867,47.7491633696867,30.8192342805909,29.7550153052605,45.5393941617007,41.4372707466048,23.6507930889121,23.0821804824402,16.0899231969474,54.2594924416169,50.1838826997004,59.4145512517242,140.661601909869,32.6667229450913,25.0751797573378,64.6369388085363,68.1345564769495,109.104073181854,112.859642993678,88.9896190992722,86.0806090137374,65.0237734780621,55.6543581744815,22.2260735710871,23.9875267157982,0,28.8851619751275,24.2702582223399,22.0502904763359,128.489210636231,82.8215465195228,96.3283688911789,128.822695878792,122.94818729252,117.493505433539,36.8877676668441,41.1590340751229,44.7854075274503,67.2856556139314,48.4015847164591,40.8616299886118,42.3857179981938,52.6348945311363,41.6882436658418,69.9653467260761,42.7963663786693,45.7087566833751,53.252703259441,63.610423666404,54.1455696891314,24.6826082248709,26.9785399428737,26.6209189472595,67.4300618817573,49.8005085822238,125.985960419396,124.597161683439,127.175940575352,65.912024314049,63.0118020727349,19.0788886647599,25.1111045296945,24.3976955167603,36.8489769880907,32.4676755198872,20.5784542681123,24.4405951096503,17.4651569455904,26.4278114398533,27.9635270406561,28.2636021191488,26.509143833769,27.5377807243253,19.7947080811569,28.1974828991395,29.2636557216474,23.9893249009592,23.8649154233671,24.7726724590439,23.8591290656385,51.418085273232,44.8895067034306,65.7992389352809,45.6024654800135,43.518165357296,29.6836755400799,25.3412802804591,34.9460971935922,58.284434354677,38.6876832252191,45.462550805502,42.4007489412408,27.1827800168993,55.1803852881567,73.8935195149272,63.9960032837998,29.2262905365139,26.6027858748854,33.8701378159905,60.7458240105399,43.760502336372,56.5564549836982,29.6659908770092,29.2286859179656,46.5843304457238,47.1761864929709,55.384281060917,57.8066320116507,83.7990940619527,124.933844378804,22.9998743506967,35.7504738383774,37.1013751013461,41.6992717696291,27.9587641827183,21.0802173848314,28.9036455402568,67.6961196302767,20.2487560415005,17.3971791988088,19.8229554233981,24.2660835835813,34.312545211397,22.1151659718641,29.550134432687,28.8958466783273,28.0513860155406,36.17980166411,41.550460450929,43.9156606253628,38.4138592819186,151.307694382375,24.3325228340256,25.289231487682,30.6105620669094,26.5240479390859,24.7652856910833,27.288222420673,27.5483070205603,60.0191820114516,27.8082710883366,28.1768059450051,29.7357399837074,43.6199507530874,29.751055667139,37.2629818178718,36.8350024170219,31.8454826909589,16.8531164955176,25.7347907114715,25.2905514462077,28.5833566098993,26.9704968978261,31.5108607556776,27.9358787990548,33.6466836288061,27.3052789810659,33.0198201545579,39.7044634071436,41.334931197978,43.1146806773319,38.4151865945083,45.4796021552251,41.6669964162197,43.0318225970459,49.6563749413376,25.2347938276953,23.3593470100976,79.6309266990953,83.56637906568,22.1819780556643,32.5131340604614,30.9281907173024,39.1266037769284,44.2532307251292,41.6594121186505,56.9434873853414,64.5619902518123,44.9890023752482,54.3151168672342,51.4705189994477,62.0185391971413,51.4408558701772,64.7209138076693,27.3121777372438,25.2489212867501,34.9393980586549,25.4564159806643,26.3775382547971,30.7896249318498,32.693289693241,37.4929775868189,28.2597710114475,40.7210640941942,41.5033677922008,19.1871871573508,20.4421354917731,21.1370385641763,17.2431103180227,17.364755502174,17.0599320693551,31.93427125704,19.2940919862292,18.9447375099776,8.62609239164127,32.3762624471598,30.8917296383415,29.5517287198121,25.8332275471554,33.2886029740723,51.7308932466493,26.5287976478679,28.5188708773545,28.6869194960068,24.6424760702927,34.6737952904559,55.4641683264412,64.003836497358,45.5565566466892,46.9505142055403,48.4742496718761,43.751505029102,47.8337399768531,56.9917290811156,101.030160239312,108.781136763742,119.498718343626,80.0216564283724,19.5871719785106,27.1931112893911,33.2787939114651,42.667586697539,25.5561657727168,32.0159770323244,29.2975820916607,32.7387253194996,33.4198011123591,34.8184132870264,29.1463705205924,40.331308391761,26.0889933444706,26.9909905794318,32.0784592570687,40.9550888434687,48.8660878060728,35.4685764390951,67.7000205533811,25.734747432428,22.9765903293211,27.724946724117,44.2952839321159,43.6557910080377,51.6856586336442,36.3533729477506,33.8672509465485,45.8253299006933,50.6009321159994,61.8813259489121,55.1512161321137,21.7873923777885,31.6928775267749,31.2932071146125,34.9360260275279,40.6680904132721,38.1753727796921,59.9795949755761,47.6383567369332,78.3778662196135,56.6757983001252,48.4765583647951,43.4339307811986,44.6315644468353,48.5845440092765,47.9291427255579,50.1347039003343,25.0324157714188,31.4402420668049,32.4027382702259,30.5570970160024,22.6042148405629,23.9214898511794,25.8519335723371,26.3466566490476,28.8299991786735,27.6399947608848,46.7788602827406,27.9957354319305,29.0746837991394,28.9454313402427,28.8541848499967,30.789121488211,40.0547108762918,40.1695794825133,38.2163675296683,55.4752085688873,93.2008969630388,925.583805319441,34.5383221361591,37.228160352847,38.1124329154333,39.5229059841857,39.7046894903329,46.3561092650728,42.3164250742838,50.8567820464698,64.9861285021956,186.355414048839,30.3370675803051,26.5570032030115,24.5479187623937,21.566856614314,24.3476306107775,24.4378066380956,25.1208489496735,23.7780138751069,29.8860691846517,23.31928283643,27.2230699869469,27.3856644878704,31.2688485331071,31.7905173933868,38.0907044473555,28.8581739386284,25.0301659940437,25.686346303704,38.8311084004703,57.6185199635129,37.1797797262548,37.5144663388365,46.1446335712534,25.9785847603851,24.3972375348804,22.9158205375759,30.7617196395201,21.9226406326606,30.215755895588,22.9507650078814,27.0192721934532,23.5634052671786,25.888015587591,29.9945434518271,46.6859101879206,23.9027048055788,35.9797941261075,32.9092665325932,38.0556062491529,36.2262166316633,33.9957844444175,31.1291633304061,32.8506375292937,38.5288535833164,36.0276312047406,37.0820369580734,36.1101859563463,36.52895825577,41.4375511416274,46.3537303779422,40.1251178564507,23.9009822465918,40.4797030369593,37.3727485100103,40.8194354166476,42.9185141905178,34.5924471584942,35.3851270361643,37.8227297275794,38.9636582219006,43.4065023872441,36.5313066245368,57.7976539807471,38.5563808903566,39.3032884678498,48.698494137193,37.1848418846318,34.5302833656243,34.4738597554365,34.8558096583658,48.3459871608671,74.7937378389178,52.7213491695642,54.2570735351786 | |||
|short_description=p1@Tbc1d20 | |||
}} | |||
Revision as of 22:25, 13 September 2013
| Short description: | p1@Tbc1d20 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tbc1d20_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 0bp_to_ENSMUST00000140482, NM_024196, uc008nfb.1, uc012cgc.1_5end |
| EntrezGene: | Tbc1d20 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
