FFCP PHASE1:Mm9::chr2:131685475..131685491,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=71995|HGNC=|MCL_coexpression_id=56|UniProt=Q9DAX3|association_with_transcript=0bp_to_ENSMUST00000040941,NM_001166206,uc008mlx.2_5end|description=CAGE_peak_1_at_Erv3_5end|id=chr2:131685475..131685491,-|ontology_enrichment_celltype=CL:0000864!3.41e-08!2;CL:0000878!3.41e-08!2;CL:0000129!3.41e-08!2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.34e-12!3;UBERON:0000478!3.34e-12!3;UBERON:0000158!3.34e-12!3;UBERON:0005795!2.63e-09!4;UBERON:0000995!2.63e-09!4;UBERON:0001987!9.85e-09!2;UBERON:0003124!9.85e-09!2;UBERON:0004340!9.85e-09!2;UBERON:0003975!1.62e-07!5;UBERON:0004175!6.06e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.33e-44,3;UBERON:0000478,2.33e-44,3;UBERON:0000158,2.33e-44,3;UBERON:0005795,9.53e-34,4;UBERON:0000995,9.53e-34,4;UBERON:0001987,2.43e-30,2;UBERON:0003124,2.43e-30,2;UBERON:0004340,2.43e-30,2;UBERON:0003975,3.42e-27,5;UBERON:0003134,2.48e-17,8;UBERON:0006834,4.83e-16,1;UBERON:0000305,9.51e-16,1;UBERON:0000029,1.33e-15,1;UBERON:0001097,1.33e-15,1;UBERON:0003968,1.33e-15,1;UBERON:0001467,1.33e-15,1;UBERON:0004175,1.69e-15,9;UBERON:0000474,1.69e-15,9;UBERON:0003100,7.94e-13,11;UBERON:0007023,1.36e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,43.5063143212498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03486947026204,0,0,0,0,0,7382.53726397626,278.982837327651,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0,0,0,0,363.353272473488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Erv3}} | ||
|EntrezGene=71995 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=Q9DAX3 | |||
|association_with_transcript=0bp_to_ENSMUST00000040941,NM_001166206,uc008mlx.2_5end | |||
|description=CAGE_peak_1_at_Erv3_5end | |||
|id=chr2:131685475..131685491,- | |||
|ontology_enrichment_celltype=CL:0000864!3.41e-08!2;CL:0000878!3.41e-08!2;CL:0000129!3.41e-08!2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.34e-12!3;UBERON:0000478!3.34e-12!3;UBERON:0000158!3.34e-12!3;UBERON:0005795!2.63e-09!4;UBERON:0000995!2.63e-09!4;UBERON:0001987!9.85e-09!2;UBERON:0003124!9.85e-09!2;UBERON:0004340!9.85e-09!2;UBERON:0003975!1.62e-07!5;UBERON:0004175!6.06e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.33e-44,3;UBERON:0000478,2.33e-44,3;UBERON:0000158,2.33e-44,3;UBERON:0005795,9.53e-34,4;UBERON:0000995,9.53e-34,4;UBERON:0001987,2.43e-30,2;UBERON:0003124,2.43e-30,2;UBERON:0004340,2.43e-30,2;UBERON:0003975,3.42e-27,5;UBERON:0003134,2.48e-17,8;UBERON:0006834,4.83e-16,1;UBERON:0000305,9.51e-16,1;UBERON:0000029,1.33e-15,1;UBERON:0001097,1.33e-15,1;UBERON:0003968,1.33e-15,1;UBERON:0001467,1.33e-15,1;UBERON:0004175,1.69e-15,9;UBERON:0000474,1.69e-15,9;UBERON:0003100,7.94e-13,11;UBERON:0007023,1.36e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0,0,0,0,0,43.5063143212498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03486947026204,0,0,0,0,0,7382.53726397626,278.982837327651,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0,0,0,0,363.353272473488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Erv3 | |||
}} |
Revision as of 22:07, 13 September 2013
Short description: | p1@Erv3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Erv3_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000040941, NM_001166206, uc008mlx.2_5end |
EntrezGene: | Erv3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.33e-44 | 3 |
extraembryonic structure | 2.33e-44 | 3 |
membranous layer | 2.33e-44 | 3 |
embryonic uterus | 9.53e-34 | 4 |
uterus | 9.53e-34 | 4 |
placenta | 2.43e-30 | 2 |
chorion | 2.43e-30 | 2 |
allantois | 2.43e-30 | 2 |
internal female genitalia | 3.42e-27 | 5 |
female reproductive organ | 2.48e-17 | 8 |
uterus or analog | 4.83e-16 | 1 |
amnion | 9.51e-16 | 1 |
lymph node | 1.33e-15 | 1 |
axillary lymph node | 1.33e-15 | 1 |
peripheral lymph node | 1.33e-15 | 1 |
shoulder | 1.33e-15 | 1 |
internal genitalia | 1.69e-15 | 9 |
female reproductive system | 1.69e-15 | 9 |
female organism | 7.94e-13 | 11 |
adult organism | 1.36e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.