FFCP PHASE1:Mm9::chr2:131388224..131388238,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11550|HGNC=|UniProt=E9QJT7,A2ANQ2|association_with_transcript=-203bp_to_ENSMUST00000028810,NM_013460,uc008mlu.1_5end|description=CAGE_peak_1_at_Adra1d_5end|id=chr2:131388224..131388238,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,9.14e-10,8;CL:0000333,1.71e-07,10;CL:0000095,1.71e-07,10;CL:0000243,1.71e-07,10;CL:0000123,1.71e-07,10;CL:0000125,1.71e-07,10;CL:0000030,1.71e-07,10;CL:0000339,1.71e-07,10;CL:0000128,2.94e-07,6;CL:0000126,2.94e-07,6;CL:0000127,2.94e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!4.13e-07!10;UBERON:0000411!4.13e-07!10;UBERON:0001950!4.13e-07!10;UBERON:0004121!6.96e-07!102;UBERON:0000924!6.96e-07!102;UBERON:0006601!6.96e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.53e-13,10;UBERON:0000411,3.53e-13,10;UBERON:0001950,3.53e-13,10;UBERON:0002619,1.16e-12,17;UBERON:0000956,2.61e-11,21;UBERON:0001869,2.61e-11,21;UBERON:0000203,2.61e-11,21;UBERON:0002369,1.24e-09,7;UBERON:0006858,1.24e-09,7;UBERON:0003528,3.55e-08,29;UBERON:0002791,3.55e-08,29;UBERON:0001893,3.55e-08,29;UBERON:0002020,2.74e-07,34|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.12891555560981,2.0190142737785,0.782391344348039,10.4652075062614,11.643367684927,14.1933826324227,3.3596741190087,18.6878333674463,0,0,0,0,0,0.515672092277442,0,0,0,2.37191172448392,1.77858959222228,0,2.96659908770092,1.4209602298922,3.29560121570245,6.14749288514487,0,0,0,1.14260393761521,0.662605622854841,0,0,0,1.10115880999389,1.91531007127782,1.38245879930619,0,0,0,0,0,1.22238598221448,0.589257170947335,0.996601765593721,0.559198337475902,0.454357159999104,0.377857800533928,0,0.860423876981386,0,0,0,0,0.280888840263504,9.54409806437123,5.97507810586598,5.3000936176551,0.14084341977668,6.41632387071589,10.1922095882658,0,0,0,0,0,0,7.57054909230606,1.38788261412909,3.34912026143355,4.61230994512117,4.82312449768392,2.58695155698551,2.76466500925286,0.494389935468748,4.916378135277,0,0.323533699894818,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0.449371918214468,0.915001205637253,0,4.69325664519146,3.3243009452943,0.41557608911912,0.973447578406546,0.916554274652847,0.497627882440372,0,0,0.130120442962704,0.459804208866946,0.540186389416048,0.60281927134286,0.612328492361951,0.384341160854549,1.03071897015702,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.823128545631774,1.59227413454795,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0,0.987359099480883,0.164167464079095,0.243206428637567,1.16959989940266,0,0.671032093801859,9.04246778825747,0.205809224758569,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,1.70701110857774,0.456994050438915,1.1270773567308,1.22190796707189,0.775809948670503,0.701358198903186,0.569128834118316,0.295220295959204,0.470996183524124,0.740382983530803,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.568474235311454,1.14075483509418,0.678980343100753,0.938760993154008,2.34508760418542,2.38043640886014,2.92700471786698,2.04925687338048,1.55025282754142,2.07291199254733,0.655453258862952,0.518054945597687,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.468846746368813,0,0.504941854408746,0.315508219416257,0,0,0.477937595905104,0.891194696329576,0,0,0.292255857911312,0,3.53453448063988,0.425820255624806,4.09550888434687,4.0721739838394,0.329940245945071,0,0.242780636154981,0,0,0.885905678642318,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.120625849856312,0.358117032009409,0,0.291480836629851,1.11255181206306,0.512612642393558,4.95328483111734,5.18544676635193,1.13021074202815,0.546776910884101,0.457556346413045,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0,0.621339313086926,0,0.747582730219894,0.827292452285488,0.972255941720238,1.03327858782185,0.844780627453891,0,0,0,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0.389762468933385,0.179026695667481,0,0,0,0,0.15241361331,0.100826185136841,0,0,0,1.13365191807606,0,0,0.167884616364078,0.579568782096571,0.563047426353546,0.36630324853453,0,0,3.95326289831947,1.84130094602871,2.29158205375759,2.57779773515531,6.16574267793578,6.0431511791176,2.70009000092722,3.60256962579376,2.71885445390523,5.69536342927002,0,0.399024873401031,0.512200817262403,0.972426868273176,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0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| ||
|EntrezGene=11550 | |||
|HGNC= | |||
|UniProt=E9QJT7,A2ANQ2 | |||
|association_with_transcript=-203bp_to_ENSMUST00000028810,NM_013460,uc008mlu.1_5end | |||
|description=CAGE_peak_1_at_Adra1d_5end | |||
|id=chr2:131388224..131388238,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.14e-10,8;CL:0000333,1.71e-07,10;CL:0000095,1.71e-07,10;CL:0000243,1.71e-07,10;CL:0000123,1.71e-07,10;CL:0000125,1.71e-07,10;CL:0000030,1.71e-07,10;CL:0000339,1.71e-07,10;CL:0000128,2.94e-07,6;CL:0000126,2.94e-07,6;CL:0000127,2.94e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.13e-07!10;UBERON:0000411!4.13e-07!10;UBERON:0001950!4.13e-07!10;UBERON:0004121!6.96e-07!102;UBERON:0000924!6.96e-07!102;UBERON:0006601!6.96e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.53e-13,10;UBERON:0000411,3.53e-13,10;UBERON:0001950,3.53e-13,10;UBERON:0002619,1.16e-12,17;UBERON:0000956,2.61e-11,21;UBERON:0001869,2.61e-11,21;UBERON:0000203,2.61e-11,21;UBERON:0002369,1.24e-09,7;UBERON:0006858,1.24e-09,7;UBERON:0003528,3.55e-08,29;UBERON:0002791,3.55e-08,29;UBERON:0001893,3.55e-08,29;UBERON:0002020,2.74e-07,34 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.12891555560981,2.0190142737785,0.782391344348039,10.4652075062614,11.643367684927,14.1933826324227,3.3596741190087,18.6878333674463,0,0,0,0,0,0.515672092277442,0,0,0,2.37191172448392,1.77858959222228,0,2.96659908770092,1.4209602298922,3.29560121570245,6.14749288514487,0,0,0,1.14260393761521,0.662605622854841,0,0,0,1.10115880999389,1.91531007127782,1.38245879930619,0,0,0,0,0,1.22238598221448,0.589257170947335,0.996601765593721,0.559198337475902,0.454357159999104,0.377857800533928,0,0.860423876981386,0,0,0,0,0.280888840263504,9.54409806437123,5.97507810586598,5.3000936176551,0.14084341977668,6.41632387071589,10.1922095882658,0,0,0,0,0,0,7.57054909230606,1.38788261412909,3.34912026143355,4.61230994512117,4.82312449768392,2.58695155698551,2.76466500925286,0.494389935468748,4.916378135277,0,0.323533699894818,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,0,0,0,0.449371918214468,0.915001205637253,0,4.69325664519146,3.3243009452943,0.41557608911912,0.973447578406546,0.916554274652847,0.497627882440372,0,0,0.130120442962704,0.459804208866946,0.540186389416048,0.60281927134286,0.612328492361951,0.384341160854549,1.03071897015702,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.823128545631774,1.59227413454795,0,0,0,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0,0.987359099480883,0.164167464079095,0.243206428637567,1.16959989940266,0,0.671032093801859,9.04246778825747,0.205809224758569,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,1.70701110857774,0.456994050438915,1.1270773567308,1.22190796707189,0.775809948670503,0.701358198903186,0.569128834118316,0.295220295959204,0.470996183524124,0.740382983530803,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.568474235311454,1.14075483509418,0.678980343100753,0.938760993154008,2.34508760418542,2.38043640886014,2.92700471786698,2.04925687338048,1.55025282754142,2.07291199254733,0.655453258862952,0.518054945597687,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0.468846746368813,0,0.504941854408746,0.315508219416257,0,0,0.477937595905104,0.891194696329576,0,0,0.292255857911312,0,3.53453448063988,0.425820255624806,4.09550888434687,4.0721739838394,0.329940245945071,0,0.242780636154981,0,0,0.885905678642318,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.120625849856312,0.358117032009409,0,0.291480836629851,1.11255181206306,0.512612642393558,4.95328483111734,5.18544676635193,1.13021074202815,0.546776910884101,0.457556346413045,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0,0.621339313086926,0,0.747582730219894,0.827292452285488,0.972255941720238,1.03327858782185,0.844780627453891,0,0,0,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0.389762468933385,0.179026695667481,0,0,0,0,0.15241361331,0.100826185136841,0,0,0,1.13365191807606,0,0,0.167884616364078,0.579568782096571,0.563047426353546,0.36630324853453,0,0,3.95326289831947,1.84130094602871,2.29158205375759,2.57779773515531,6.16574267793578,6.0431511791176,2.70009000092722,3.60256962579376,2.71885445390523,5.69536342927002,0,0.399024873401031,0.512200817262403,0.972426868273176,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.50695859978048,0.377252682772152,0.842773567228942,0.512201219238954,0.689225627467359,0,0.695305955669133,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.470546902076653,0.507687647350059,0,0.789209134313529,0.679020569229309,0,0.474540072496697,0.788035859004508,0,0.464810523557898,0.771626443924566,0.999242311751784,0.233931608445408,0.429742108096597,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p1@Adra1d | |||
}} |
Revision as of 22:06, 13 September 2013
Short description: | p1@Adra1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adra1d_5end |
Coexpression cluster: | NA |
Association with transcript: | -203bp_to_ENSMUST00000028810, NM_013460, uc008mlu.1_5end |
EntrezGene: | Adra1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.14e-10 | 8 |
migratory neural crest cell | 1.71e-07 | 10 |
neuron associated cell | 1.71e-07 | 10 |
glial cell (sensu Vertebrata) | 1.71e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.71e-07 | 10 |
glial cell | 1.71e-07 | 10 |
glioblast | 1.71e-07 | 10 |
glioblast (sensu Vertebrata) | 1.71e-07 | 10 |
oligodendrocyte | 2.94e-07 | 6 |
macroglial cell | 2.94e-07 | 6 |
astrocyte | 2.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.53e-13 | 10 |
visual cortex | 3.53e-13 | 10 |
neocortex | 3.53e-13 | 10 |
regional part of cerebral cortex | 1.16e-12 | 17 |
cerebral cortex | 2.61e-11 | 21 |
cerebral hemisphere | 2.61e-11 | 21 |
pallium | 2.61e-11 | 21 |
adrenal gland | 1.24e-09 | 7 |
adrenal/interrenal gland | 1.24e-09 | 7 |
brain grey matter | 3.55e-08 | 29 |
regional part of telencephalon | 3.55e-08 | 29 |
telencephalon | 3.55e-08 | 29 |
gray matter | 2.74e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.